
Microexon ID | Ta_4A:739065382-739065390:+ |
Species | Triticum Aestivum | Coordinates | 4A:739065382..739065390 |
Microexon Cluster ID | MEP22 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | Glyco_hydro_32N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | YSKYAMMGRACYGSYTWYCAYTTYCARCCYSMCAARAAYTGGATGAAYGATCCYAAYGGTCCAATGTWYTACAAGGGATKGTACCAYYTSTTCTAYCARTACAAYCCV |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | ATCCCAACG |
Microexon Amino Acid seq | DPNG |
Microexon-tag DNA Seq | TGGCAGCGCAGTGGCTACCATTTCCAGACGGCCAAGAACTACATGAGCGATCCCAACGGTCTGATGTACTACCGTGGATGGTACCACATGTTCTTCCAGTACAACCCG |
Microexon-tag Amino Acid Seq | WQRSGYHFQTAKNYMSDPNGLMYYRGWYHMFFQYNP |
Microexon-tag spanning region | 739065203-739066101 |
Microexon-tag prediction score | 0.9392 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | TraesCS4A02G485400.1x |
Reference Transcript ID | TraesCS4A02G485400.1 |
Gene ID | TraesCS4A02G485400 |
Gene Name | 6-SFT |
Transcript ID | TraesCS4A02G485400.1 |
Protein ID | |
Gene ID | TraesCS4A02G485400 |
Gene Name | |
Pfam domain motif | Glyco_hydro_32N |
Motif E-value | 5.90E-93 |
Motif start | 84 |
Motif end | 403 |
Protein seq | >TraesCS4A02G485400.1 MGSHGKPPLPYAYKPLPSDADGERAGCTRWRVCAVALTASAMVVVVVGATLLAGFRVDQAVDEEAAGGFPWSNEMLQWQR SGYHFQTAKNYMSDPNGLMYYRGWYHMFFQYNPVGTDWDDGMEWGHAVSRNLVQWRTLPIAMVADQWYDILGVLSGSMTV LPNGTVIMIYTGATNASAVEVQCIATPADPTDPLLRRWTKHPANPVIWSPPGVGTKDFRDPMTAWYDESDDTWRTLLGSK DDNNGHHDGIAMMYKTKDFLNYELIPGILHRVERTGEWECIDFYPVGRRTSDNSSEMLHVLKASMDDERHDYYSLGTYDS AANRWTPIDPELDLGIGLRYDWGKFYASTSFYDPAKKRRVLMGYVGEVDSKRADVVKGWASIQSVPRTIALDEKTRTNLL LWPVEEIETLRLNATELSDVTLNTGSVIHIPLRQGTQLDIEATFHLDASAVAALLVLAAGDRRGEQTAVYFYVSRGLDGG LHTSFCQDELRSSRAKDVTKRVIGSTVPVLDGEAFSMRVLVDHSIVQGFAMGGRTTMTSRVYPMEAYQEAKVYLFNNATG ASVTAERLVVHEMDSAHNQLSNMDDHSYVQ* |
CDS seq | >TraesCS4A02G485400.1 ATGGGGTCACACGGCAAGCCACCGCTACCGTACGCGTACAAGCCACTGCCCTCCGACGCCGACGGCGAGCGGGCCGGCTG CACGAGGTGGCGCGTGTGCGCCGTCGCGCTGACGGCCTCGGCCATGGTGGTGGTGGTGGTCGGCGCCACGCTCCTGGCAG GGTTCCGGGTGGACCAGGCCGTCGATGAGGAGGCGGCGGGCGGGTTCCCGTGGAGCAACGAGATGCTGCAGTGGCAGCGC AGTGGCTACCATTTCCAGACGGCCAAGAACTACATGAGCGATCCCAACGGTCTGATGTACTACCGTGGATGGTACCACAT GTTCTTCCAGTACAACCCGGTGGGCACCGACTGGGACGACGGCATGGAGTGGGGCCACGCCGTGTCCCGGAACCTCGTCC AATGGCGCACCCTCCCTATTGCCATGGTGGCCGACCAGTGGTACGACATCCTCGGGGTTCTATCGGGCTCTATGACCGTG CTACCCAATGGCACGGTCATCATGATCTACACGGGGGCCACCAACGCCTCCGCCGTTGAGGTCCAGTGCATCGCCACTCC CGCCGACCCTACCGACCCCCTCCTCCGCCGCTGGACCAAGCACCCCGCCAACCCCGTCATCTGGTCGCCGCCGGGGGTCG GCACCAAGGATTTCCGAGACCCGATGACCGCTTGGTACGATGAATCTGATGACACATGGCGCACCCTCCTCGGGTCCAAG GACGACAACAACGGCCACCACGATGGCATCGCCATGATGTACAAGACCAAGGACTTCCTTAACTACGAGCTCATCCCGGG CATCTTGCATCGGGTCGAGCGCACCGGCGAGTGGGAGTGCATCGACTTCTACCCTGTCGGTCGCCGCACCAGCGACAACT CATCGGAGATGTTGCACGTGTTGAAGGCGAGCATGGACGACGAACGGCATGACTACTACTCGCTAGGCACGTACGACTCT GCGGCAAACAGGTGGACGCCGATCGACCCGGAGCTCGACTTGGGGATCGGGTTGAGATACGACTGGGGTAAGTTCTACGC GTCCACCTCGTTCTATGATCCGGCGAAGAAGCGACGCGTGCTGATGGGGTACGTCGGCGAGGTCGACTCCAAGCGGGCTG ATGTGGTGAAGGGATGGGCCTCAATTCAGTCAGTTCCAAGGACAATTGCTCTCGACGAGAAGACCCGGACGAACCTCCTC CTCTGGCCCGTGGAGGAGATTGAGACCCTCCGCCTCAACGCCACCGAACTCAGCGACGTCACCCTTAACACCGGCTCCGT CATCCATATCCCGCTCCGCCAAGGCACTCAGCTCGACATCGAGGCCACTTTCCACCTTGATGCTTCTGCCGTCGCTGCCC TCCTCGTCCTCGCTGCCGGTGACCGCCGTGGCGAGCAAACGGCGGTGTACTTCTACGTGTCCAGGGGGCTCGACGGAGGC CTCCATACCAGCTTCTGCCAAGACGAGTTACGGTCGTCACGGGCCAAGGACGTGACGAAGCGAGTGATTGGGAGCACGGT GCCGGTGCTCGACGGCGAGGCTTTCTCGATGAGGGTGCTCGTGGACCACTCCATCGTGCAAGGCTTCGCGATGGGCGGGA GGACCACGATGACGTCACGGGTGTACCCGATGGAGGCCTATCAGGAGGCAAAAGTGTACTTGTTCAACAATGCCACCGGT GCCAGCGTCACGGCGGAAAGGCTCGTCGTGCACGAGATGGACTCAGCGCACAACCAGCTCTCCAATATGGACGATCACTC GTATGTTCAATGA |
Ta_4A:739065382-739065390:+ does not have available information here.