
Microexon ID | Ta_4A:738961368-738961376:+ |
Species | Triticum Aestivum | Coordinates | 4A:738961368..738961376 |
Microexon Cluster ID | MEP22 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | Glyco_hydro_32N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | YSKYAMMGRACYGSYTWYCAYTTYCARCCYSMCAARAAYTGGATGAAYGATCCYAAYGGTCCAATGTWYTACAAGGGATKGTACCAYYTSTTCTAYCARTACAAYCCV |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | ATCCCAACG |
Microexon Amino Acid seq | DPNG |
Microexon-tag DNA Seq | TGGCAGCGAGCCGCGTTCCATTTCCAGCCGGAGAAGAACTTCATGAGCGATCCCAACGGTCTGGTATACTACCGTGGATGGTACCACCTGTTCTACCAGTACAACCCG |
Microexon-tag Amino Acid Seq | WQRAAFHFQPEKNFMSDPNGLVYYRGWYHLFYQYNP |
Microexon-tag spanning region | 738961189-738961965 |
Microexon-tag prediction score | 0.948 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | TraesCS4A02G485000.2x |
Reference Transcript ID | TraesCS4A02G485000.2 |
Gene ID | TraesCS4A02G485000 |
Gene Name | NA |
Transcript ID | TraesCS4A02G485000.2 |
Protein ID | |
Gene ID | TraesCS4A02G485000 |
Gene Name | |
Pfam domain motif | Glyco_hydro_32N |
Motif E-value | 9.90E-93 |
Motif start | 82 |
Motif end | 398 |
Protein seq | >TraesCS4A02G485000.2 MESHAVPSEQPAYKPLPSTANEDAHEHQGGGVRWRACAAVLAASAVVLVAATTLGRGARVDEDAGGFPWSNEMLQWQRAA FHFQPEKNFMSDPNGLVYYRGWYHLFYQYNPKGIAWAFGILWGHAASRDLVHWRQLPLAVLPDQWYDIQGVLSGSITVLP NGTLIMLYTGATNVSTVEVQCVAVPEDPNDPLLRRWTKHPANPVLSSPPWISTNDFRDPTSAWYDGSDHTWRTVLGSKDD HNGHHAGIAFMYKTKDFLHYELVPGILHRVENTGEWECIDFYPVGGDDNSSQVLYVLKASMDDERHDYYSLGRYDAAANT WTPVDPEADLGIGLRYDWGKLYASSSFYDPVKRRRIMMGYVGEVDSVQADVAKGWASIQSVPRTVALDDKTRTNLLLWHV EEIETLRLNATELSDITIETGSVFHVPLRQADQLDIEASFRLDASAITALNEADIGYNCSSSGGAASRGALGPFGLIVLA SSDRCGEQTAVYFYVSRGLDGALQTSFCQDESRSSRARDVTKRVVGSTVPVLDGEALSMRVLVDHSIVQSFAMGGRCTVT SRVYPMEAIYEAAGVYLFNNATNSSVMAERLVVHEMDSAPNEIITDDKYLHFE* |
CDS seq | >TraesCS4A02G485000.2 ATGGAGTCACACGCCGTTCCTAGCGAGCAGCCCGCGTACAAGCCGCTGCCATCCACCGCCAACGAGGACGCCCATGAGCA CCAGGGCGGCGGCGTGAGGTGGCGCGCGTGCGCTGCCGTGCTGGCGGCCTCGGCCGTGGTGCTCGTCGCCGCCACCACGC TAGGAAGAGGAGCCAGGGTGGACGAGGACGCCGGCGGGTTCCCGTGGAGCAACGAGATGCTGCAGTGGCAGCGAGCCGCG TTCCATTTCCAGCCGGAGAAGAACTTCATGAGCGATCCCAACGGTCTGGTATACTACCGTGGATGGTACCACCTGTTCTA CCAGTACAACCCGAAGGGCATCGCCTGGGCCTTTGGCATTTTGTGGGGCCATGCCGCGTCCCGAGACCTCGTCCACTGGC GCCAACTCCCATTGGCTGTGCTTCCTGACCAGTGGTATGACATTCAAGGTGTCTTGTCAGGCAGCATCACTGTGCTTCCT AACGGCACGCTCATCATGCTCTACACTGGTGCCACCAATGTCTCCACCGTCGAGGTCCAGTGTGTTGCCGTGCCCGAAGA CCCAAACGACCCCCTCCTCCGCCGCTGGACCAAGCACCCCGCTAACCCCGTCCTCTCCTCGCCACCGTGGATCAGCACCA ACGACTTCCGAGACCCCACCTCCGCGTGGTATGATGGCTCTGATCACACATGGCGCACCGTCCTCGGGTCCAAGGATGAT CACAATGGTCACCATGCCGGCATCGCCTTCATGTACAAGACTAAGGACTTCCTTCACTATGAGCTCGTCCCTGGCATCTT GCACCGCGTCGAGAACACCGGCGAGTGGGAGTGCATCGACTTCTACCCAGTCGGTGGCGACGACAACTCATCACAAGTGT TATACGTGCTCAAGGCGAGCATGGACGACGAACGACATGACTACTACTCGCTGGGGAGGTATGACGCGGCGGCAAACACG TGGACGCCAGTGGACCCCGAGGCCGACTTGGGGATCGGGCTGAGGTACGACTGGGGCAAGCTTTATGCATCCAGCTCATT CTATGATCCGGTGAAGCGGCGGCGCATTATGATGGGTTATGTCGGTGAGGTCGACTCCGTGCAGGCCGACGTCGCCAAAG GATGGGCCTCAATCCAGTCAGTTCCAAGGACGGTGGCTCTGGATGACAAAACCAGGACAAACCTCCTCTTATGGCATGTG GAGGAGATCGAGACCCTTCGCCTCAATGCCACCGAACTAAGCGACATCACCATCGAAACTGGCTCTGTCTTCCATGTCCC TCTCCGCCAAGCTGATCAACTCGACATCGAGGCCTCCTTCCGCCTTGACGCTTCTGCTATCACTGCCCTCAATGAGGCCG ACATCGGCTACAACTGCAGCAGCAGCGGTGGTGCTGCCTCCCGCGGTGCGCTTGGCCCCTTTGGCCTCATCGTCCTCGCA TCCAGCGACCGTTGTGGTGAGCAGACGGCGGTGTACTTCTATGTGTCCAGGGGCCTCGACGGGGCCCTTCAGACCAGTTT TTGCCAAGACGAGTCACGTTCTTCACGAGCCAGGGACGTGACGAAGCGGGTGGTGGGAAGCACGGTACCAGTGCTAGATG GTGAGGCTTTGTCGATGAGGGTGCTTGTGGACCACTCCATTGTGCAGAGCTTTGCGATGGGCGGGAGGTGCACAGTGACA TCACGGGTGTATCCTATGGAGGCGATCTATGAGGCGGCAGGGGTGTACCTGTTCAACAATGCCACCAACAGCAGTGTGAT GGCGGAAAGACTTGTCGTGCACGAGATGGACTCCGCACCCAACGAGATCATCACGGATGATAAATATTTGCATTTTGAAT GA |
Ta_4A:738961368-738961376:+ does not have available information here.