Microexon ID Ta_4A:609928282-609928290:-
Species Triticum   Aestivum
Coordinates 4A:609928282..609928290
Microexon Cluster ID MEP22
Size 9
Phase 1
Pfam Domain Motif Glyco_hydro_32N
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 49,9,50
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq YSKYAMMGRACYGSYTWYCAYTTYCARCCYSMCAARAAYTGGATGAAYGATCCYAAYGGTCCAATGTWYTACAAGGGATKGTACCAYYTSTTCTAYCARTACAAYCCV
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq ATCCATGTG
Microexon Amino Acid seq DPCG
Microexon-tag DNA Seq AGGTACAGGACTGCCTACCACCTGCAGCCTCCCAAGAACTGGATCAACGATCCATGTGGACCAATGTACTACAATGGCATCTACCATGAATTCTACCAATATAACCCC
Microexon-tag Amino Acid Seq RYRTAYHLQPPKNWINDPCGPMYYNGIYHEFYQYNP
Microexon-tag spanning region609928140-609928938
Microexon-tag prediction score0.9429
Overlapped with the annotated transcript (%) 100
New Transcript ID TraesCS4A02G321600.2x
Reference Transcript ID TraesCS4A02G321600.2
Gene ID TraesCS4A02G321600
Gene Name NA
Transcript ID TraesCS4A02G321600.2
Protein ID
Gene ID TraesCS4A02G321600
Gene Name
Pfam domain motif Glyco_hydro_32N
Motif E-value 5.00E-94
Motif start 57
Motif end 378
Protein seq >TraesCS4A02G321600.2
MSAFTVFLGGLACIFSTSLLFQLLVGPCREGVFFCSQSSTKGPSTAIVSERYRTAYHLQPPKNWINDPCGPMYYNGIYHE
FYQYNPDGSFNPNTSYNIVWGHSVSTDLVNWITLEPAIEPDTPNDIKGCWSGSATIVSGDQPVIIYTGVIDIEKHQVQNI
ALPKNRSDPYLREWTKAGNNPVIQSGVPGLNSGQFRDPTTGWIGPDGLWRIAVGAQLNGYGAALLYKSEDFLNWTRVDHP
LYSSNASIMLECLDFFAVLPGSNNGLDMSSAIPNGAKHVLKMGLNFGEDVYVIGVYDLKRDVFVPDTDDSRLWPRIDYGN
FYASKTFFDSKHGRRIIWAWTTETDSSSDDVAKGWAGIHSFPRTIWLDSDSKRLLQWPVEEIESLRGNEINHQGLDLKMG
DLFEIEGADTLQADIEIDFELTSIDDADPFDPSWLFDAEKHCREADASVHGSIGPFGLVILASDDTEEHTVVHFRVYKSQ
KNYMILMCSDLRRSSLTPGLDTPTYGGFFEFDLEKERKISLRTLIDRSAVESFGGGGRVCIMARVYPVSLVDDNRQPHMY
AFNNGSATVRVPQLRAWSMRRAQVSV*
CDS seq >TraesCS4A02G321600.2
ATGTCGGCCTTCACAGTCTTCCTTGGTGGCCTCGCGTGTATCTTCTCCACCAGCCTTCTCTTCCAACTCCTGGTAGGGCC
CTGCAGAGAGGGAGTCTTCTTCTGCTCACAGTCTTCAACGAAGGGCCCCTCCACCGCCATTGTCAGCGAGAGGTACAGGA
CTGCCTACCACCTGCAGCCTCCCAAGAACTGGATCAACGATCCATGTGGACCAATGTACTACAATGGCATCTACCATGAA
TTCTACCAATATAACCCCGATGGCTCCTTCAATCCCAATACCTCCTACAACATAGTTTGGGGCCATTCGGTTTCAACGGA
CCTCGTCAACTGGATTACTCTTGAACCCGCAATAGAACCGGATACCCCAAATGACATAAAAGGTTGCTGGTCCGGCTCAG
CCACAATTGTATCTGGTGATCAACCGGTCATCATATACACCGGTGTCATCGACATTGAGAAGCATCAGGTCCAAAACATT
GCGCTTCCCAAAAACCGGTCTGATCCCTACCTCAGGGAATGGACCAAAGCAGGCAATAACCCAGTGATCCAATCGGGTGT
ACCGGGCTTGAACTCGGGGCAGTTCAGGGATCCGACAACCGGTTGGATCGGACCGGACGGACTATGGAGAATAGCAGTCG
GTGCTCAGCTGAACGGCTACGGTGCTGCACTTTTGTACAAGAGCGAAGACTTCTTGAACTGGACTAGAGTTGACCATCCG
CTGTATTCATCCAATGCCTCCATTATGTTAGAGTGCCTGGATTTCTTCGCAGTATTGCCGGGAAGTAACAATGGACTGGA
CATGTCTTCAGCAATCCCAAATGGCGCCAAGCATGTCCTCAAAATGGGCCTGAATTTCGGTGAAGACGTGTACGTGATAG
GGGTTTATGATCTCAAACGTGATGTCTTTGTGCCAGATACTGATGACAGTCGGCTATGGCCGAGGATCGATTATGGCAAT
TTCTATGCTTCAAAAACGTTCTTTGACTCTAAACATGGAAGGAGGATCATATGGGCTTGGACTACTGAGACTGACAGTTC
TTCAGATGATGTTGCAAAAGGCTGGGCAGGAATCCATTCATTCCCCAGGACAATTTGGTTAGACAGCGATAGCAAACGGC
TGCTGCAATGGCCAGTTGAAGAGATTGAGTCCCTTCGAGGAAATGAAATCAACCATCAAGGACTAGACTTGAAGATGGGA
GATCTATTTGAGATTGAGGGAGCTGACACTTTGCAGGCTGACATCGAGATAGATTTTGAGCTGACGTCAATCGATGATGC
TGATCCTTTCGATCCTTCCTGGCTTTTTGATGCCGAGAAGCATTGCCGGGAAGCGGATGCATCGGTTCATGGTAGCATAG
GGCCATTTGGACTTGTTATTCTGGCCTCCGACGACACGGAGGAGCACACTGTTGTGCACTTCAGAGTTTACAAATCACAG
AAAAATTACATGATCCTCATGTGCTCTGATCTAAGAAGGTCTTCCCTGACACCAGGACTGGACACACCAACCTATGGAGG
CTTCTTTGAATTTGACCTTGAAAAGGAAAGGAAGATCTCCCTCAGAACTCTGATTGATCGGTCTGCGGTGGAGAGCTTCG
GTGGTGGTGGCAGGGTCTGCATCATGGCTAGAGTTTACCCAGTGTCGCTTGTCGACGACAACCGCCAACCCCACATGTAT
GCCTTTAACAATGGCAGTGCCACAGTCAGAGTGCCTCAGCTCAGGGCTTGGAGCATGAGGAGAGCACAAGTGAGCGTTTA
A
Ta_4A:609928282-609928290:- does not have available information here.