
Microexon ID | Ta_4A:609928282-609928290:- |
Species | Triticum Aestivum | Coordinates | 4A:609928282..609928290 |
Microexon Cluster ID | MEP22 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | Glyco_hydro_32N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | YSKYAMMGRACYGSYTWYCAYTTYCARCCYSMCAARAAYTGGATGAAYGATCCYAAYGGTCCAATGTWYTACAAGGGATKGTACCAYYTSTTCTAYCARTACAAYCCV |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | ATCCATGTG |
Microexon Amino Acid seq | DPCG |
Microexon-tag DNA Seq | AGGTACAGGACTGCCTACCACCTGCAGCCTCCCAAGAACTGGATCAACGATCCATGTGGACCAATGTACTACAATGGCATCTACCATGAATTCTACCAATATAACCCC |
Microexon-tag Amino Acid Seq | RYRTAYHLQPPKNWINDPCGPMYYNGIYHEFYQYNP |
Microexon-tag spanning region | 609928140-609928938 |
Microexon-tag prediction score | 0.9429 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | TraesCS4A02G321600.2x |
Reference Transcript ID | TraesCS4A02G321600.2 |
Gene ID | TraesCS4A02G321600 |
Gene Name | NA |
Transcript ID | TraesCS4A02G321600.2 |
Protein ID | |
Gene ID | TraesCS4A02G321600 |
Gene Name | |
Pfam domain motif | Glyco_hydro_32N |
Motif E-value | 5.00E-94 |
Motif start | 57 |
Motif end | 378 |
Protein seq | >TraesCS4A02G321600.2 MSAFTVFLGGLACIFSTSLLFQLLVGPCREGVFFCSQSSTKGPSTAIVSERYRTAYHLQPPKNWINDPCGPMYYNGIYHE FYQYNPDGSFNPNTSYNIVWGHSVSTDLVNWITLEPAIEPDTPNDIKGCWSGSATIVSGDQPVIIYTGVIDIEKHQVQNI ALPKNRSDPYLREWTKAGNNPVIQSGVPGLNSGQFRDPTTGWIGPDGLWRIAVGAQLNGYGAALLYKSEDFLNWTRVDHP LYSSNASIMLECLDFFAVLPGSNNGLDMSSAIPNGAKHVLKMGLNFGEDVYVIGVYDLKRDVFVPDTDDSRLWPRIDYGN FYASKTFFDSKHGRRIIWAWTTETDSSSDDVAKGWAGIHSFPRTIWLDSDSKRLLQWPVEEIESLRGNEINHQGLDLKMG DLFEIEGADTLQADIEIDFELTSIDDADPFDPSWLFDAEKHCREADASVHGSIGPFGLVILASDDTEEHTVVHFRVYKSQ KNYMILMCSDLRRSSLTPGLDTPTYGGFFEFDLEKERKISLRTLIDRSAVESFGGGGRVCIMARVYPVSLVDDNRQPHMY AFNNGSATVRVPQLRAWSMRRAQVSV* |
CDS seq | >TraesCS4A02G321600.2 ATGTCGGCCTTCACAGTCTTCCTTGGTGGCCTCGCGTGTATCTTCTCCACCAGCCTTCTCTTCCAACTCCTGGTAGGGCC CTGCAGAGAGGGAGTCTTCTTCTGCTCACAGTCTTCAACGAAGGGCCCCTCCACCGCCATTGTCAGCGAGAGGTACAGGA CTGCCTACCACCTGCAGCCTCCCAAGAACTGGATCAACGATCCATGTGGACCAATGTACTACAATGGCATCTACCATGAA TTCTACCAATATAACCCCGATGGCTCCTTCAATCCCAATACCTCCTACAACATAGTTTGGGGCCATTCGGTTTCAACGGA CCTCGTCAACTGGATTACTCTTGAACCCGCAATAGAACCGGATACCCCAAATGACATAAAAGGTTGCTGGTCCGGCTCAG CCACAATTGTATCTGGTGATCAACCGGTCATCATATACACCGGTGTCATCGACATTGAGAAGCATCAGGTCCAAAACATT GCGCTTCCCAAAAACCGGTCTGATCCCTACCTCAGGGAATGGACCAAAGCAGGCAATAACCCAGTGATCCAATCGGGTGT ACCGGGCTTGAACTCGGGGCAGTTCAGGGATCCGACAACCGGTTGGATCGGACCGGACGGACTATGGAGAATAGCAGTCG GTGCTCAGCTGAACGGCTACGGTGCTGCACTTTTGTACAAGAGCGAAGACTTCTTGAACTGGACTAGAGTTGACCATCCG CTGTATTCATCCAATGCCTCCATTATGTTAGAGTGCCTGGATTTCTTCGCAGTATTGCCGGGAAGTAACAATGGACTGGA CATGTCTTCAGCAATCCCAAATGGCGCCAAGCATGTCCTCAAAATGGGCCTGAATTTCGGTGAAGACGTGTACGTGATAG GGGTTTATGATCTCAAACGTGATGTCTTTGTGCCAGATACTGATGACAGTCGGCTATGGCCGAGGATCGATTATGGCAAT TTCTATGCTTCAAAAACGTTCTTTGACTCTAAACATGGAAGGAGGATCATATGGGCTTGGACTACTGAGACTGACAGTTC TTCAGATGATGTTGCAAAAGGCTGGGCAGGAATCCATTCATTCCCCAGGACAATTTGGTTAGACAGCGATAGCAAACGGC TGCTGCAATGGCCAGTTGAAGAGATTGAGTCCCTTCGAGGAAATGAAATCAACCATCAAGGACTAGACTTGAAGATGGGA GATCTATTTGAGATTGAGGGAGCTGACACTTTGCAGGCTGACATCGAGATAGATTTTGAGCTGACGTCAATCGATGATGC TGATCCTTTCGATCCTTCCTGGCTTTTTGATGCCGAGAAGCATTGCCGGGAAGCGGATGCATCGGTTCATGGTAGCATAG GGCCATTTGGACTTGTTATTCTGGCCTCCGACGACACGGAGGAGCACACTGTTGTGCACTTCAGAGTTTACAAATCACAG AAAAATTACATGATCCTCATGTGCTCTGATCTAAGAAGGTCTTCCCTGACACCAGGACTGGACACACCAACCTATGGAGG CTTCTTTGAATTTGACCTTGAAAAGGAAAGGAAGATCTCCCTCAGAACTCTGATTGATCGGTCTGCGGTGGAGAGCTTCG GTGGTGGTGGCAGGGTCTGCATCATGGCTAGAGTTTACCCAGTGTCGCTTGTCGACGACAACCGCCAACCCCACATGTAT GCCTTTAACAATGGCAGTGCCACAGTCAGAGTGCCTCAGCTCAGGGCTTGGAGCATGAGGAGAGCACAAGTGAGCGTTTA A |
Ta_4A:609928282-609928290:- does not have available information here.