
Microexon ID | Ta_4A:609817901-609817909:- |
Species | Triticum Aestivum | Coordinates | 4A:609817901..609817909 |
Microexon Cluster ID | MEP22 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | Glyco_hydro_32N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | YSKYAMMGRACYGSYTWYCAYTTYCARCCYSMCAARAAYTGGATGAAYGATCCYAAYGGTCCAATGTWYTACAAGGGATKGTACCAYYTSTTCTAYCARTACAAYCCV |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | ATCCAAGTG |
Microexon Amino Acid seq | DPSG |
Microexon-tag DNA Seq | AGGTACAGGACTGCCTACCACTTCCAGCCTCCCAAGAACTGGATGAATGATCCAAGTGGACCAATGTACTACAATGACATCTATCATGAGTTCTACCAGTATAACCCC |
Microexon-tag Amino Acid Seq | RYRTAYHFQPPKNWMNDPSGPMYYNDIYHEFYQYNP |
Microexon-tag spanning region | 609817757-609819023 |
Microexon-tag prediction score | 0.9544 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | TraesCS4A02G321400.2x |
Reference Transcript ID | TraesCS4A02G321400.2 |
Gene ID | TraesCS4A02G321400 |
Gene Name | NA |
Transcript ID | TraesCS4A02G321400.2 |
Protein ID | |
Gene ID | TraesCS4A02G321400 |
Gene Name | |
Pfam domain motif | Glyco_hydro_32N |
Motif E-value | 4.40E-86 |
Motif start | 1 |
Motif end | 315 |
Protein seq | >TraesCS4A02G321400.2 MNDPSGPMYYNDIYHEFYQYNPDGSNSPSLSYNIVWGHSVSTDLVNWIGLEPVLVPDTPSDICGCWTGSATILPGNQPAI TYTGLINMEKHQVQNIALPKNRSDPYLREWTKAGNNPVIQPVIPGLNSSQFRDPTTGWIGPDELWRIAVGADLNGSITAL LYKSEDFLNWTSVEHPLYSSNSFDMWECLDFFAVLSGSNGGLDMSSAIPNGAKHVLKMGMDYSDKYMIGVYDLKRDVFVP DTVIDDYRLWLRIDYGNFYASKSFFDSKQGRRIIWAWSNETDASSDDVAKGWAGIHSIPRTIWLDSDGKRLLQWPVEEIE SLRRNEINHQGLELKKGDLFEIKGIDTLQADVEIDFELTSIDDAEPFDPSWLLDAPKQCREADASVHGGIGPFGLVILAS DNMEEQTVVHFRVYKSQEKYMILMCTDLRRSSLRPGLYTPAYGGFFEFDLEKERKISLRTLIDRSVL* |
CDS seq | >TraesCS4A02G321400.2 ATGAATGATCCAAGTGGACCAATGTACTACAATGACATCTATCATGAGTTCTACCAGTATAACCCCGATGGCTCCAACAG TCCCAGTCTCTCCTATAACATAGTTTGGGGCCATTCAGTTTCAACAGACCTCGTCAACTGGATCGGTCTTGAACCCGTAC TAGTACCGGATACCCCAAGTGACATATGCGGTTGCTGGACCGGCTCAGCCACAATTCTACCTGGTAATCAACCAGCGATC ACATACACTGGTCTCATCAACATGGAGAAGCATCAGGTCCAAAACATTGCGCTTCCCAAAAACCGGTCTGATCCGTACCT CAGGGAATGGACCAAAGCAGGCAATAACCCAGTGATCCAACCGGTCATACCAGGCTTGAACTCGAGCCAGTTCAGGGATC CGACAACTGGTTGGATCGGACCAGATGAACTATGGAGAATAGCAGTTGGTGCTGATCTGAACGGCTCCATTACTGCACTT TTGTACAAGAGTGAAGACTTCTTGAATTGGACTAGTGTTGAACACCCGCTGTATTCATCCAATTCCTTCGACATGTGGGA GTGCCTGGATTTCTTCGCGGTATTGTCGGGAAGTAACGGTGGACTGGACATGTCTTCAGCAATCCCTAATGGCGCCAAGC ATGTCCTCAAAATGGGCATGGATTACAGCGACAAGTACATGATTGGGGTTTATGATCTCAAACGTGATGTCTTTGTGCCA GATACTGTCATAGACGACTATCGGCTGTGGCTGAGGATCGATTATGGAAATTTCTATGCTTCAAAATCGTTCTTTGACTC AAAACAGGGTAGGAGGATCATATGGGCTTGGAGCAACGAGACAGATGCTTCTTCAGATGATGTTGCAAAAGGCTGGGCAG GAATCCATTCAATCCCTAGGACAATTTGGTTAGACAGCGATGGCAAGCGGTTGTTGCAATGGCCAGTTGAAGAGATTGAG TCCCTTCGAAGAAATGAAATCAACCATCAGGGACTAGAGCTCAAGAAGGGAGATCTATTTGAGATTAAGGGGATTGACAC TTTGCAGGCTGACGTCGAGATAGATTTTGAGCTGACATCCATCGATGACGCCGAACCTTTTGATCCTTCCTGGCTTTTAG ACGCTCCGAAGCAGTGCCGGGAAGCTGATGCATCGGTTCATGGTGGCATAGGGCCATTTGGACTTGTTATCCTGGCCTCC GACAACATGGAGGAGCAGACTGTTGTGCATTTCAGAGTTTACAAATCACAGGAAAAGTACATGATCCTCATGTGCACTGA CCTAAGAAGGTCTTCCCTGAGACCAGGACTGTACACACCAGCCTATGGAGGCTTCTTTGAATTTGACCTTGAAAAAGAAA GGAAGATCTCTCTCAGAACTCTGATTGATCGGTCGGTGTTGTGA |
Ta_4A:609817901-609817909:- does not have available information here.