Microexon ID Ta_4A:609817901-609817909:-
Species Triticum   Aestivum
Coordinates 4A:609817901..609817909
Microexon Cluster ID MEP22
Size 9
Phase 1
Pfam Domain Motif Glyco_hydro_32N
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 49,9,50
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq YSKYAMMGRACYGSYTWYCAYTTYCARCCYSMCAARAAYTGGATGAAYGATCCYAAYGGTCCAATGTWYTACAAGGGATKGTACCAYYTSTTCTAYCARTACAAYCCV
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq ATCCAAGTG
Microexon Amino Acid seq DPSG
Microexon-tag DNA Seq AGGTACAGGACTGCCTACCACTTCCAGCCTCCCAAGAACTGGATGAATGATCCAAGTGGACCAATGTACTACAATGACATCTATCATGAGTTCTACCAGTATAACCCC
Microexon-tag Amino Acid Seq RYRTAYHFQPPKNWMNDPSGPMYYNDIYHEFYQYNP
Microexon-tag spanning region609817757-609819023
Microexon-tag prediction score0.9544
Overlapped with the annotated transcript (%) 100
New Transcript ID TraesCS4A02G321400.2x
Reference Transcript ID TraesCS4A02G321400.2
Gene ID TraesCS4A02G321400
Gene Name NA
Transcript ID TraesCS4A02G321400.2
Protein ID
Gene ID TraesCS4A02G321400
Gene Name
Pfam domain motif Glyco_hydro_32N
Motif E-value 4.40E-86
Motif start 1
Motif end 315
Protein seq >TraesCS4A02G321400.2
MNDPSGPMYYNDIYHEFYQYNPDGSNSPSLSYNIVWGHSVSTDLVNWIGLEPVLVPDTPSDICGCWTGSATILPGNQPAI
TYTGLINMEKHQVQNIALPKNRSDPYLREWTKAGNNPVIQPVIPGLNSSQFRDPTTGWIGPDELWRIAVGADLNGSITAL
LYKSEDFLNWTSVEHPLYSSNSFDMWECLDFFAVLSGSNGGLDMSSAIPNGAKHVLKMGMDYSDKYMIGVYDLKRDVFVP
DTVIDDYRLWLRIDYGNFYASKSFFDSKQGRRIIWAWSNETDASSDDVAKGWAGIHSIPRTIWLDSDGKRLLQWPVEEIE
SLRRNEINHQGLELKKGDLFEIKGIDTLQADVEIDFELTSIDDAEPFDPSWLLDAPKQCREADASVHGGIGPFGLVILAS
DNMEEQTVVHFRVYKSQEKYMILMCTDLRRSSLRPGLYTPAYGGFFEFDLEKERKISLRTLIDRSVL*
CDS seq >TraesCS4A02G321400.2
ATGAATGATCCAAGTGGACCAATGTACTACAATGACATCTATCATGAGTTCTACCAGTATAACCCCGATGGCTCCAACAG
TCCCAGTCTCTCCTATAACATAGTTTGGGGCCATTCAGTTTCAACAGACCTCGTCAACTGGATCGGTCTTGAACCCGTAC
TAGTACCGGATACCCCAAGTGACATATGCGGTTGCTGGACCGGCTCAGCCACAATTCTACCTGGTAATCAACCAGCGATC
ACATACACTGGTCTCATCAACATGGAGAAGCATCAGGTCCAAAACATTGCGCTTCCCAAAAACCGGTCTGATCCGTACCT
CAGGGAATGGACCAAAGCAGGCAATAACCCAGTGATCCAACCGGTCATACCAGGCTTGAACTCGAGCCAGTTCAGGGATC
CGACAACTGGTTGGATCGGACCAGATGAACTATGGAGAATAGCAGTTGGTGCTGATCTGAACGGCTCCATTACTGCACTT
TTGTACAAGAGTGAAGACTTCTTGAATTGGACTAGTGTTGAACACCCGCTGTATTCATCCAATTCCTTCGACATGTGGGA
GTGCCTGGATTTCTTCGCGGTATTGTCGGGAAGTAACGGTGGACTGGACATGTCTTCAGCAATCCCTAATGGCGCCAAGC
ATGTCCTCAAAATGGGCATGGATTACAGCGACAAGTACATGATTGGGGTTTATGATCTCAAACGTGATGTCTTTGTGCCA
GATACTGTCATAGACGACTATCGGCTGTGGCTGAGGATCGATTATGGAAATTTCTATGCTTCAAAATCGTTCTTTGACTC
AAAACAGGGTAGGAGGATCATATGGGCTTGGAGCAACGAGACAGATGCTTCTTCAGATGATGTTGCAAAAGGCTGGGCAG
GAATCCATTCAATCCCTAGGACAATTTGGTTAGACAGCGATGGCAAGCGGTTGTTGCAATGGCCAGTTGAAGAGATTGAG
TCCCTTCGAAGAAATGAAATCAACCATCAGGGACTAGAGCTCAAGAAGGGAGATCTATTTGAGATTAAGGGGATTGACAC
TTTGCAGGCTGACGTCGAGATAGATTTTGAGCTGACATCCATCGATGACGCCGAACCTTTTGATCCTTCCTGGCTTTTAG
ACGCTCCGAAGCAGTGCCGGGAAGCTGATGCATCGGTTCATGGTGGCATAGGGCCATTTGGACTTGTTATCCTGGCCTCC
GACAACATGGAGGAGCAGACTGTTGTGCATTTCAGAGTTTACAAATCACAGGAAAAGTACATGATCCTCATGTGCACTGA
CCTAAGAAGGTCTTCCCTGAGACCAGGACTGTACACACCAGCCTATGGAGGCTTCTTTGAATTTGACCTTGAAAAAGAAA
GGAAGATCTCTCTCAGAACTCTGATTGATCGGTCGGTGTTGTGA
Ta_4A:609817901-609817909:- does not have available information here.