
Microexon ID | Ta_3D:604398624-604398632:+ |
Species | Triticum Aestivum | Coordinates | 3D:604398624..604398632 |
Microexon Cluster ID | MEP22 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | Glyco_hydro_32N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | YSKYAMMGRACYGSYTWYCAYTTYCARCCYSMCAARAAYTGGATGAAYGATCCYAAYGGTCCAATGTWYTACAAGGGATKGTACCAYYTSTTCTAYCARTACAAYCCV |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | ATCCAAATG |
Microexon Amino Acid seq | DPNG |
Microexon-tag DNA Seq | AGGTACCGGACCGCCTACCACTTCCAGCCCCCCAAGAACTGGATCAACGATCCAAATGGGCCAATGTACTACAATGGCATTTACCATGAGTTCTACCAGTATAACCCC |
Microexon-tag Amino Acid Seq | RYRTAYHFQPPKNWINDPNGPMYYNGIYHEFYQYNP |
Microexon-tag spanning region | 604397734-604398774 |
Microexon-tag prediction score | 0.9686 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | TraesCS3D02G524600.1x |
Reference Transcript ID | TraesCS3D02G524600.1 |
Gene ID | TraesCS3D02G524600 |
Gene Name | NA |
Transcript ID | TraesCS3D02G524600.1 |
Protein ID | |
Gene ID | TraesCS3D02G524600 |
Gene Name | |
Pfam domain motif | Glyco_hydro_32N |
Motif E-value | 2.80E-102 |
Motif start | 50 |
Motif end | 367 |
Protein seq | >TraesCS3D02G524600.1 MAQSWASFLLLALFSSSLLVCGSNGERVFLYPQSQKVSSIVSQRYRTAYHFQPPKNWINDPNGPMYYNGIYHEFYQYNPN GSVWGNIVWGHSVSTDLVNWIPLETAIERDTPSDINGCWTGSATILPGNRLVIIYTGADPEKRQVQNIVVPKNLSDPYLR EWTKAGNNPVIQPVGPGLNSGQFRDPTTGWIGPDGLWRIAVGAELNGDSAALLYKSKDFLNWTRVDHPLYSSNSSSMWEC PDFFAVLPGNSGGLDLSAAIPNGAKHVLKMSLDSCDKYMIGVYDLKSDTFIPDTVLDDRRLWSRIDYGNFYASKSFFDSK KGRRIIWGWTNETDSSSDDVAKGWAGIHAIPRTIWLDSHGKQLLQWPVEEVESLRGNEINHQGLELKKGGLFEIKGADSF QADVEIDFELTSIDKADPFDPSWLLDVEKHCREAGASVNGGIGPFGLVVLASDNMEEHTAVHFRVYKSEQKYMILMCSDL RSSSLRPGLYTPAYGGFFEYDLEKEKKISLRTLIDRSAVESFGGGGRVCIMARVYPVAVVDGVAHMYAFNNGSTTVRVPQ LRAWSMRRAQVNVKGME* |
CDS seq | >TraesCS3D02G524600.1 ATGGCCCAATCCTGGGCCTCCTTCCTCCTCCTTGCTCTCTTCTCCTCCAGCCTCCTCGTCTGCGGCAGCAATGGGGAGCG AGTCTTCCTCTACCCGCAGTCCCAGAAGGTCTCATCCATCGTCAGCCAGAGGTACCGGACCGCCTACCACTTCCAGCCCC CCAAGAACTGGATCAACGATCCAAATGGGCCAATGTACTACAATGGCATTTACCATGAGTTCTACCAGTATAACCCCAAT GGCTCTGTCTGGGGTAACATAGTTTGGGGCCACTCAGTTTCGACAGACCTCGTCAACTGGATCCCGCTTGAAACAGCAAT AGAGCGGGACACCCCGAGCGACATAAACGGTTGCTGGACCGGCTCAGCCACAATTCTCCCTGGTAACCGATTGGTCATCA TATACACCGGTGCCGACCCAGAGAAGCGTCAGGTCCAAAACATTGTGGTTCCGAAAAACCTGTCTGACCCATACCTGAGA GAATGGACCAAAGCCGGAAATAACCCGGTGATCCAACCGGTCGGACCGGGCTTGAACTCAGGCCAGTTCAGGGATCCGAC AACTGGTTGGATCGGACCTGATGGACTGTGGAGGATAGCAGTTGGTGCTGAGCTCAACGGCGACAGTGCTGCACTTTTGT ACAAGAGCAAAGACTTTCTGAACTGGACTAGAGTTGACCACCCACTGTATTCATCCAATTCCTCCTCTATGTGGGAGTGT CCGGATTTCTTTGCAGTATTGCCGGGCAATAGCGGTGGACTGGACCTGTCTGCAGCGATCCCGAATGGTGCCAAGCATGT CCTCAAGATGAGCCTGGATTCCTGTGACAAGTACATGATTGGGGTTTATGATCTGAAAAGTGACACCTTTATTCCAGATA CTGTCCTAGATGACCGTCGGCTATGGTCGAGGATTGATTATGGTAATTTCTATGCCTCAAAGTCGTTTTTCGACTCGAAG AAGGGCAGGAGGATCATATGGGGTTGGACTAATGAGACAGATAGTTCTTCAGACGATGTTGCGAAAGGTTGGGCAGGAAT CCATGCAATTCCCAGGACAATTTGGTTAGACAGCCATGGCAAGCAGTTGCTGCAATGGCCAGTTGAAGAGGTCGAGTCCC TTCGAGGAAATGAAATCAACCATCAAGGACTAGAGCTGAAGAAGGGAGGTCTGTTTGAGATTAAGGGAGCTGACAGTTTC CAGGCTGATGTGGAGATAGACTTTGAGCTGACGTCCATCGATAAAGCTGATCCTTTCGATCCCTCCTGGCTTTTGGACGT CGAGAAGCATTGCCGGGAAGCGGGTGCATCAGTCAATGGTGGCATAGGTCCGTTTGGACTTGTTGTCCTGGCCTCTGACA ACATGGAGGAGCACACTGCTGTGCACTTCCGGGTGTACAAGTCAGAGCAGAAGTACATGATACTCATGTGCTCTGATCTA AGAAGTTCTTCGTTGAGGCCAGGACTGTACACACCAGCCTATGGAGGCTTCTTTGAATACGACCTGGAAAAAGAAAAGAA GATATCTCTGAGAACTCTGATTGATCGGTCGGCGGTGGAGAGCTTCGGCGGTGGCGGCAGGGTCTGCATCATGGCCAGAG TGTACCCCGTGGCGGTTGTCGACGGCGTGGCCCACATGTATGCCTTCAACAACGGCAGTACCACGGTCAGGGTGCCACAG CTCAGGGCCTGGAGCATGAGGAGAGCACAAGTGAATGTGAAAGGGATGGAGTGA |
Ta_3D:604398624-604398632:+ does not have available information here.