
Microexon ID | Ta_3A:734129049-734129057:+ |
Species | Triticum Aestivum | Coordinates | 3A:734129049..734129057 |
Microexon Cluster ID | MEP22 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | Glyco_hydro_32N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | YSKYAMMGRACYGSYTWYCAYTTYCARCCYSMCAARAAYTGGATGAAYGATCCYAAYGGTCCAATGTWYTACAAGGGATKGTACCAYYTSTTCTAYCARTACAAYCCV |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | ATCCAAACG |
Microexon Amino Acid seq | DPNG |
Microexon-tag DNA Seq | AGGTACCGGACCGCCTACCACTTCCAGCCCCCCAAGAACTGGATCAACGATCCAAACGGGCCAATGTACTACAATGGCATATACCATGAGTTCTACCAGTACAACCCC |
Microexon-tag Amino Acid Seq | RYRTAYHFQPPKNWINDPNGPMYYNGIYHEFYQYNP |
Microexon-tag spanning region | 734128200-734129183 |
Microexon-tag prediction score | 0.9697 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | TraesCS3A02G516900.1x |
Reference Transcript ID | TraesCS3A02G516900.1 |
Gene ID | TraesCS3A02G516900 |
Gene Name | NA |
Transcript ID | TraesCS3A02G516900.1 |
Protein ID | |
Gene ID | TraesCS3A02G516900 |
Gene Name | |
Pfam domain motif | Glyco_hydro_32N |
Motif E-value | 4.00E-102 |
Motif start | 52 |
Motif end | 369 |
Protein seq | >TraesCS3A02G516900.1 MAQSWAFFLLVVLCFCCVSDLICGSNGERVFLYPQSQKVSSIVSQRYRTAYHFQPPKNWINDPNGPMYYNGIYHEFYQYN PNGSVWGNIVWGHSVSTDLINWIPLETAIARDTPSDINGCWTGSATILPGNRLVIIYTGADPEKRQVQNIVVPKNMSDPY LREWTKAGNNPVIQPVGPGLNSGQFRDPTTGWVGPDGLWRIAVGAELNGDSAALLYKSKDFLNWTRVDHPLYSSNSSSMW ECPDFFAVLPGNSGGLDLSAAIPNGAKHVLKMSLDSCDKYMIGVYDLKSDSFIPDTVLDDRRLWLRIDYGNFYASKSFFD SKKGRRIIWGWTNETDSSSDDVAKGWAGIHAIPRTIWLDSHGKQLLQWPVEEVESLRGNEINHQGLELKKGGLFEIKGTD SFQADVEIDFELTSIDKADPFDPSWLLDVEKHCREAGASVNAGIGPFGLVVLASDNMEEHTAVHFRVYKSEQKYMILMCS DLRSSSLRPGLYTPAYGGFFEYDLEKEKKISLRTLIDRSAVESFGGSGRVCIMARVYPVAVVDGVAHMYAFNNGSATVRV PQLRAWSMRRAQVNVKGME* |
CDS seq | >TraesCS3A02G516900.1 ATGGCCCAATCCTGGGCCTTCTTCCTCCTCGTCGTCCTCTGCTTCTGCTGTGTGTCCGACCTCATCTGCGGCAGCAATGG GGAGCGAGTCTTCCTCTACCCGCAGTCCCAGAAGGTCTCGTCCATCGTCAGCCAGAGGTACCGGACCGCCTACCACTTCC AGCCCCCCAAGAACTGGATCAACGATCCAAACGGGCCAATGTACTACAATGGCATATACCATGAGTTCTACCAGTACAAC CCCAATGGCTCCGTCTGGGGTAACATAGTTTGGGGCCACTCAGTTTCTACAGACCTCATCAACTGGATTCCACTTGAAAC CGCAATAGCGCGGGACACCCCGAGCGACATAAACGGTTGCTGGACCGGCTCAGCCACAATCCTCCCCGGTAACCGACTGG TCATCATATACACCGGTGCCGACCCGGAAAAGCGTCAGGTCCAAAACATTGTGGTTCCGAAAAACATGTCTGACCCGTAC CTGAGGGAATGGACCAAAGCCGGCAATAACCCGGTGATCCAGCCGGTCGGTCCAGGCTTGAACTCGGGCCAGTTCAGGGA TCCGACAACCGGTTGGGTTGGACCTGATGGACTGTGGAGGATAGCAGTTGGTGCTGAGCTCAACGGCGACAGTGCTGCAC TTTTGTACAAGAGCAAAGACTTTCTGAACTGGACTAGAGTTGACCACCCACTGTATTCATCCAATTCCTCCTCTATGTGG GAGTGCCCGGATTTCTTCGCGGTATTGCCAGGCAATAGCGGTGGACTGGACCTGTCTGCAGCGATCCCGAATGGTGCCAA GCATGTCCTCAAGATGAGCCTGGATTCCTGTGACAAGTACATGATTGGGGTTTATGATCTGAAAAGTGACAGCTTTATTC CAGATACTGTCCTAGATGACCGCCGGCTATGGTTGAGGATCGATTATGGTAATTTCTATGCCTCAAAGTCATTTTTCGAC TCGAAGAAGGGCAGGAGGATCATATGGGGTTGGACTAACGAGACAGACAGTTCTTCGGACGACGTTGCAAAAGGTTGGGC AGGAATCCATGCAATTCCCAGGACAATTTGGTTAGACAGCCATGGCAAGCAGTTGCTGCAATGGCCAGTTGAAGAGGTCG AGTCCCTTCGAGGAAATGAAATCAACCATCAAGGACTAGAGCTGAAGAAGGGTGGTCTGTTTGAGATTAAGGGAACTGAC AGTTTCCAGGCTGATGTGGAGATAGACTTTGAGCTGACGTCCATCGATAAAGCCGATCCTTTCGATCCCTCCTGGCTTTT GGACGTCGAGAAGCATTGCCGGGAAGCGGGTGCATCAGTCAATGCTGGCATAGGGCCATTTGGACTTGTTGTCCTGGCCT CTGACAACATGGAGGAGCACACTGCTGTGCACTTCCGGGTGTACAAGTCAGAGCAGAAGTACATGATACTCATGTGCTCT GATCTAAGAAGTTCTTCATTGAGACCAGGACTGTACACACCAGCCTATGGAGGCTTCTTTGAATATGACCTTGAAAAAGA AAAGAAGATATCTCTGAGAACTCTGATTGATCGGTCGGCGGTGGAGAGCTTCGGCGGTAGCGGCAGGGTCTGCATCATGG CCAGAGTGTACCCCGTGGCGGTTGTCGACGGCGTGGCCCACATGTATGCCTTCAACAACGGCAGTGCCACGGTCAGGGTG CCACAGCTCAGGGCCTGGAGCATGAGGAGAGCACAAGTGAATGTGAAAGGGATGGAGTGA |
Ta_3A:734129049-734129057:+ does not have available information here.