
Microexon ID | Ta_2D:635161648-635161656:+ |
Species | Triticum Aestivum | Coordinates | 2D:635161648..635161656 |
Microexon Cluster ID | MEP22 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | Glyco_hydro_32N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | YSKYAMMGRACYGSYTWYCAYTTYCARCCYSMCAARAAYTGGATGAAYGATCCYAAYGGTCCAATGTWYTACAAGGGATKGTACCAYYTSTTCTAYCARTACAAYCCV |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | ATCCGAATG |
Microexon Amino Acid seq | DPNG |
Microexon-tag DNA Seq | GGCATCAGGCCCGCCTACCACTTCCTGCCCGCCAAGAACTGGCAGAACGATCCGAATGGACCGATGTACCACAATGGCGTGTACCACATGTTCTATCAGTACAACCCT |
Microexon-tag Amino Acid Seq | GIRPAYHFLPAKNWQNDPNGPMYHNGVYHMFYQYNP |
Microexon-tag spanning region | 635161429-635164406 |
Microexon-tag prediction score | 0.9432 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | TraesCS2D02G564900.1x |
Reference Transcript ID | TraesCS2D02G564900.1 |
Gene ID | TraesCS2D02G564900 |
Gene Name | NA |
Transcript ID | TraesCS2D02G564900.1 |
Protein ID | |
Gene ID | TraesCS2D02G564900 |
Gene Name | |
Pfam domain motif | Glyco_hydro_32N |
Motif E-value | 8.10E-98 |
Motif start | 48 |
Motif end | 380 |
Protein seq | >TraesCS2D02G564900.1 MAARLPLAACVVAFHLCLLLSPSSSLRRLSEAESSLVRHGVGIRPAYHFLPAKNWQNDPNGPMYHNGVYHMFYQYNPLGA VWGTGNLSWGHSVSRDLVNWDALDTALDPTAPFDYNGCWSGSATILPGGIPALLYTGRIQGDKEVQVQNVAFPKNPADPL LREWVKPAYNPVIPLPADVPGDNFRDPTTAWVGRDGLWRIAVAAKVGGPNGIASTLIYRSKDFRHWKRNALPLYTSRAAG MVECPDLFPVAEPGVEEGRLGYASGPASSAVRHVLKLSVMNTTQDYYAVGRYDDVADTFVPEVDVERNADDCRTWRRFDY GHVYASKSFFDSSKNRRVLWAWANESDSQDNDIARGWSGVQTVPRKVWLDQDGKQVRQWPIEEIETLRSKRVVGLLGAQV NAGGMNKIVGVGAQADVEAIFEIPSLEEAETFQPNWLLDPQKLCEENGASVPGRVGPFGLLVMASSNMQEHTAVFFRVFR HNQKYKVLMCTDLTRSTGRDNVYKPSYGGFVDIDIEQQGRSISLRTLIDHSVVESFGGGGRTCITARVYPEHAENKNSHV FVFNNGTGLVKVSKLEAWRLAMASVNVVHGG* |
CDS seq | >TraesCS2D02G564900.1 ATGGCCGCCAGACTCCCTCTCGCCGCGTGCGTCGTCGCCTTCCACCTCTGCCTTCTCCTCTCGCCGTCCTCCTCACTCCG CCGGCTCTCGGAAGCGGAGAGCTCGCTAGTCCGCCATGGCGTCGGCATCAGGCCCGCCTACCACTTCCTGCCCGCCAAGA ACTGGCAGAACGATCCGAATGGACCGATGTACCACAATGGCGTGTACCACATGTTCTATCAGTACAACCCTTTGGGTGCG GTGTGGGGCACCGGCAACCTCTCATGGGGTCACTCCGTCTCCCGCGACCTCGTGAACTGGGACGCCCTTGACACCGCGCT CGACCCCACCGCCCCCTTCGACTACAATGGCTGTTGGTCAGGCTCCGCCACAATCCTCCCCGGCGGCATCCCGGCCTTGC TGTACACCGGCCGCATCCAAGGCGACAAGGAGGTGCAGGTGCAGAATGTCGCCTTCCCCAAGAACCCTGCCGACCCGCTC CTCCGCGAGTGGGTCAAGCCTGCCTACAACCCCGTCATACCACTCCCAGCCGACGTCCCTGGAGACAACTTCCGTGACCC GACCACGGCGTGGGTAGGCCGCGACGGCCTATGGCGTATCGCCGTTGCAGCCAAGGTCGGTGGCCCCAATGGCATTGCCT CCACGCTCATCTACCGGAGTAAAGACTTTCGGCACTGGAAGCGGAATGCCTTGCCGTTGTACACATCGCGCGCTGCAGGC ATGGTCGAATGCCCGGACTTATTCCCGGTGGCGGAGCCTGGCGTGGAGGAGGGGCGACTTGGCTACGCGTCCGGACCAGC GAGCAGTGCTGTGAGGCACGTGCTGAAGCTGAGTGTGATGAACACGACCCAAGACTACTACGCGGTCGGCAGGTATGATG ACGTGGCAGACACCTTTGTGCCGGAGGTGGATGTAGAGCGCAACGCCGACGATTGCCGGACCTGGCGCCGCTTCGACTAC GGGCACGTGTATGCATCAAAGTCCTTCTTCGACTCGAGCAAGAACCGGCGCGTGCTATGGGCATGGGCCAATGAGTCCGA CAGCCAGGACAACGACATCGCCAGGGGCTGGTCCGGCGTTCAGACGGTTCCGAGGAAGGTGTGGCTGGACCAAGACGGTA AGCAGGTAAGGCAGTGGCCGATCGAGGAGATCGAGACATTGAGGAGCAAACGAGTCGTCGGCTTGCTAGGAGCGCAGGTG AATGCCGGTGGCATGAACAAGATCGTTGGTGTGGGCGCGCAGGCTGATGTGGAGGCCATCTTCGAGATCCCGTCCCTAGA AGAGGCTGAGACTTTCCAGCCCAACTGGCTGCTGGACCCCCAAAAGCTATGCGAGGAGAATGGTGCGTCCGTGCCAGGCA GGGTCGGCCCTTTCGGTCTGCTCGTCATGGCCTCCAGCAATATGCAGGAGCACACGGCTGTCTTCTTCAGAGTGTTCAGG CACAACCAGAAGTACAAAGTTCTCATGTGCACCGACCTCACAAGATCGACTGGGAGGGACAACGTGTACAAGCCGTCATA TGGAGGGTTTGTGGACATAGACATCGAGCAGCAAGGGAGGAGCATATCTCTTAGAACATTGATTGACCATTCGGTAGTGG AGAGCTTTGGAGGTGGGGGCCGGACATGCATCACGGCACGGGTGTACCCTGAGCACGCGGAGAACAAAAATAGCCATGTG TTCGTGTTCAATAATGGGACCGGACTCGTGAAGGTGTCCAAGCTCGAGGCATGGAGGCTGGCGATGGCTTCAGTAAACGT CGTGCATGGCGGGTGA |
Ta_2D:635161648-635161656:+ does not have available information here.