
Microexon ID | Ta_2D:588453036-588453044:+ |
Species | Triticum Aestivum | Coordinates | 2D:588453036..588453044 |
Microexon Cluster ID | MEP22 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | Glyco_hydro_32N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | YSKYAMMGRACYGSYTWYCAYTTYCARCCYSMCAARAAYTGGATGAAYGATCCYAAYGGTCCAATGTWYTACAAGGGATKGTACCAYYTSTTCTAYCARTACAAYCCV |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | ATCCCAATG |
Microexon Amino Acid seq | DPNG |
Microexon-tag DNA Seq | CATGGCCGAACGGCCTACCACTTCCAGCCTGCCAAGTACTGGCAAAATGATCCCAATGGGCCAATGTACCACAACGGCATGTACCACTTCTTCTACCAGTACAACCCT |
Microexon-tag Amino Acid Seq | HGRTAYHFQPAKYWQNDPNGPMYHNGMYHFFYQYNP |
Microexon-tag spanning region | 588452837-588453210 |
Microexon-tag prediction score | 0.9528 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | TraesCS2D02G489400.1x |
Reference Transcript ID | TraesCS2D02G489400.1 |
Gene ID | TraesCS2D02G489400 |
Gene Name | NA |
Transcript ID | TraesCS2D02G489400.1 |
Protein ID | |
Gene ID | TraesCS2D02G489400 |
Gene Name | |
Pfam domain motif | Glyco_hydro_32N |
Motif E-value | 4.20E-91 |
Motif start | 15 |
Motif end | 341 |
Protein seq | >TraesCS2D02G489400.1 MNGAEKLNHGRTAYHFQPAKYWQNDPNGPMYHNGMYHFFYQYNPRGPTWGDGKLSWGHSVSGDLVNWADVGNALDPTSPF DVNGCWSGSATVLPGGRPAILYTGMDDADKAQVQNVAFAKNPSDPLLREWEKPSCNPVIPMPADVTGNNFRDPTEAWRGR DGLWRVAVAAEVRGVGSLLVYRSADFLHWERNAGAPLHAASSRDGDGPAVLECPDLFPMAAPGAMEGLDVSASRAGVLHV LKLSDFAKEDHYMVGRYDDEEDTFKPAEPERGGDCANWRRLDHGHLYASKSFYDARKKRRVLWAWVDETDGGGEGRGWAG IQAFPRAMWLDTDGKRLVQWPVEEIETLRRKRVGLQWATEVDAGGTKEIAGIVSLQADVQAVFEVPNLEDAETLDPKWLQ DPKGLCAEKGASVPGGVGPFGLLVMASGDLREHTAIFFRVFKHLDTYKVLMCTDLTKSSTKAEGVKIPSYGAFLDVDVEK DKSLSLRTLIDHTVVESFGDGGRTCMTARMYPEHAATSRSRLYAFNYGAGAVKVSKLEAWELATAAVNGGGVI* |
CDS seq | >TraesCS2D02G489400.1 ATGAACGGAGCTGAGAAGTTGAACCATGGCCGAACGGCCTACCACTTCCAGCCTGCCAAGTACTGGCAAAATGATCCCAA TGGGCCAATGTACCACAACGGCATGTACCACTTCTTCTACCAGTACAACCCTCGCGGCCCGACCTGGGGCGACGGCAAGC TATCATGGGGCCACTCCGTCTCCGGCGATCTCGTGAACTGGGCCGACGTTGGCAATGCGTTGGACCCTACCTCCCCGTTC GACGTCAACGGCTGCTGGTCGGGCTCCGCCACCGTCCTCCCCGGCGGCCGCCCGGCGATCCTCTACACCGGCATGGACGA CGCCGACAAGGCGCAGGTGCAGAACGTGGCCTTCGCCAAGAACCCCTCCGACCCGCTCCTCCGCGAGTGGGAGAAGCCCA GCTGCAACCCGGTCATCCCGATGCCGGCGGACGTCACCGGCAACAACTTCCGCGATCCCACGGAGGCGTGGCGTGGCCGC GACGGCCTATGGAGGGTCGCCGTCGCCGCCGAGGTCCGCGGTGTCGGCTCCTTGCTCGTGTACAGGAGCGCGGACTTCCT CCATTGGGAGCGCAACGCTGGCGCGCCTCTGCATGCCGCCAGCTCGCGCGACGGGGACGGCCCCGCCGTGCTGGAGTGCC CGGACCTGTTCCCGATGGCGGCACCCGGCGCGATGGAGGGGCTCGACGTGTCGGCGAGCCGCGCCGGGGTGCTGCACGTG CTCAAGCTCAGCGACTTCGCCAAGGAGGACCACTACATGGTCGGGCGGTACGACGACGAGGAGGACACCTTCAAGCCGGC AGAGCCCGAGCGCGGCGGCGACTGCGCCAACTGGCGCCGGCTCGACCACGGCCACCTGTACGCGTCCAAGTCCTTCTACG ACGCCCGCAAGAAGCGGCGTGTGCTGTGGGCATGGGTGGACGAGACCGACGGCGGCGGCGAAGGCAGAGGGTGGGCCGGC ATCCAGGCGTTCCCGAGGGCGATGTGGCTGGACACCGACGGGAAGCGGCTGGTGCAGTGGCCAGTCGAAGAGATCGAGAC GCTGAGGAGGAAGCGGGTCGGCCTGCAGTGGGCGACGGAGGTGGACGCCGGCGGCACGAAGGAGATCGCCGGCATCGTCA GCTTGCAGGCGGACGTGCAGGCGGTCTTCGAGGTCCCGAACCTGGAGGATGCCGAGACGTTGGACCCGAAGTGGCTGCAG GATCCCAAGGGGCTGTGCGCCGAGAAGGGCGCGTCCGTGCCGGGCGGAGTCGGCCCGTTCGGGCTCCTCGTCATGGCTTC CGGCGACCTGAGGGAGCACACCGCGATCTTCTTCAGGGTGTTCAAGCACCTTGACACGTACAAGGTTCTCATGTGCACCG ACCTCACAAAGTCATCTACGAAAGCAGAAGGGGTAAAAATCCCATCCTACGGGGCATTTCTGGACGTGGACGTGGAGAAG GACAAGAGCCTGTCGCTCAGAACACTGATCGATCACACGGTGGTGGAGAGCTTCGGCGACGGCGGGAGGACGTGCATGAC GGCTCGCATGTACCCAGAGCACGCGGCGACGAGCCGCAGCCGGCTGTACGCGTTCAACTATGGCGCCGGCGCCGTGAAGG TGTCCAAGCTGGAGGCGTGGGAGTTGGCAACGGCGGCCGTGAACGGTGGCGGCGTTATATAG |
Ta_2D:588453036-588453044:+ does not have available information here.