
Microexon ID | Ta_2D:486500760-486500768:+ |
Species | Triticum Aestivum | Coordinates | 2D:486500760..486500768 |
Microexon Cluster ID | MEP22 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | Glyco_hydro_32N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | YSKYAMMGRACYGSYTWYCAYTTYCARCCYSMCAARAAYTGGATGAAYGATCCYAAYGGTCCAATGTWYTACAAGGGATKGTACCAYYTSTTCTAYCARTACAAYCCV |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | ATCCCAACG |
Microexon Amino Acid seq | DPNG |
Microexon-tag DNA Seq | TGGCAGCGCACGGCGTTCCATTTCCAGCCCCAGAAGAATTGGATGAACGATCCCAACGGTCCACTGTATTACAAGGGATGGTATCACCTCTTCTACCAGTGGAACCCG |
Microexon-tag Amino Acid Seq | WQRTAFHFQPQKNWMNDPNGPLYYKGWYHLFYQWNP |
Microexon-tag spanning region | 486500563-486501110 |
Microexon-tag prediction score | 0.9726 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | TraesCS2D02G382600.2x |
Reference Transcript ID | TraesCS2D02G382600.2 |
Gene ID | TraesCS2D02G382600 |
Gene Name | NA |
Transcript ID | TraesCS2D02G382600.2 |
Protein ID | |
Gene ID | TraesCS2D02G382600 |
Gene Name | |
Pfam domain motif | Glyco_hydro_32N |
Motif E-value | 1.30E-104 |
Motif start | 129 |
Motif end | 452 |
Protein seq | >TraesCS2D02G382600.2 MIPAVPATVDGGVHDGAQSANAPLLPETSLKGQRPPARQKRPSTVLPAIAWTVLLLALAGLVVYRQGHGGGQAAAPGDQV AAAGRVVEVAASRGVVQGVSEKSTAPALLGGGAYDWTNAMLAWQRTAFHFQPQKNWMNDPNGPLYYKGWYHLFYQWNPDG AVWGNITWGHAVSRDLVHWLHLPLAMVPDHWYDINGVWTGSATQLPDGRIMMLYTGSTEDGVQVQLLAEPADPSDPLLRR WAKSEANPVLVPPPGVGLTDFRDPTTAWLNPADKAWRIAIGSKNQEHAGLALVYSTEDFVHYDLLPTLLHVVQGTGMWEC VDFYPVSAELAAGVGLDTSAAPGPGVKHVLKASLDDDRNDYYAIGTYDPATDRWAPDDAAIDVGIGLRYDYGKFYASKTF YDPVGRRRVLWGWIGESDSERADVLKGWASLQSIPRTVLMDTKTGSNLLQWPVVEVENLRMRGKRFDGLDLQPGSVVPLD VGRATQLDIEAVFQVQAGAAAAGSVAAGAEAPYNCSASAGAAGRGLLGPFGLLVVADDSLSEQTAVYFYLVRGADGKLST HFCQDAFRSSRANDLVKAVYGSSVPVLTGEDLSVRILVDHSIVESFAQGGRTCITSRVYPTKAIYDSARVFLFNNATNVN VTAKSIKIWELNSAYIRPYPDSS* |
CDS seq | >TraesCS2D02G382600.2 ATGATCCCGGCCGTCCCGGCGACCGTGGACGGCGGCGTCCACGACGGCGCCCAGAGCGCGAACGCGCCGCTGCTTCCGGA GACCAGCCTTAAGGGTCAGCGTCCTCCGGCACGGCAGAAGCGGCCGTCGACCGTTCTCCCGGCCATCGCGTGGACCGTGC TCCTTCTCGCGCTCGCCGGGCTCGTCGTCTACCGACAAGGGCATGGCGGCGGCCAGGCCGCCGCGCCGGGAGACCAGGTC GCGGCTGCGGGCCGCGTCGTGGAGGTGGCTGCCTCCCGCGGCGTCGTGCAGGGCGTGTCGGAGAAGTCCACCGCCCCGGC GCTCCTCGGCGGCGGCGCCTACGACTGGACCAACGCGATGCTAGCGTGGCAGCGCACGGCGTTCCATTTCCAGCCCCAGA AGAATTGGATGAACGATCCCAACGGTCCACTGTATTACAAGGGATGGTATCACCTCTTCTACCAGTGGAACCCGGACGGG GCGGTGTGGGGGAACATCACGTGGGGCCACGCCGTGTCGCGCGACCTCGTCCACTGGCTCCACCTGCCGCTGGCCATGGT GCCCGACCACTGGTACGACATCAACGGCGTCTGGACCGGCTCGGCGACGCAGCTCCCGGACGGCCGGATCATGATGCTCT ACACCGGGTCCACGGAGGACGGCGTGCAGGTGCAGCTCCTGGCCGAGCCGGCGGACCCGTCGGACCCGCTGCTGCGCCGC TGGGCCAAGTCGGAGGCGAACCCGGTCCTGGTGCCGCCGCCGGGCGTCGGGCTCACGGACTTCCGCGACCCGACGACGGC GTGGCTCAACCCCGCCGACAAGGCCTGGCGGATCGCCATCGGGTCCAAGAACCAGGAGCACGCCGGGCTGGCGCTGGTGT ACAGTACGGAGGACTTCGTGCACTACGACCTGCTGCCCACGCTGCTGCACGTCGTGCAGGGCACCGGGATGTGGGAGTGC GTGGACTTCTACCCGGTGTCCGCCGAGCTGGCCGCCGGCGTGGGGCTCGACACCTCCGCCGCGCCGGGGCCCGGCGTGAA GCACGTGCTCAAGGCCAGCCTCGACGACGACCGGAACGACTACTACGCGATCGGCACCTACGACCCCGCGACCGACCGGT GGGCGCCGGACGACGCGGCGATCGACGTCGGGATCGGGCTCCGGTACGACTACGGCAAGTTCTACGCGTCCAAGACGTTC TACGACCCCGTGGGGCGGCGGCGCGTGCTGTGGGGGTGGATCGGCGAGTCCGACAGCGAGCGCGCCGACGTCCTCAAGGG CTGGGCGTCCCTCCAGTCGATCCCGAGGACGGTTCTCATGGACACCAAGACGGGCAGCAACCTGCTCCAGTGGCCGGTGG TGGAGGTGGAGAACCTCCGAATGCGCGGCAAGCGCTTCGACGGCCTCGACCTGCAGCCCGGCTCCGTCGTGCCCTTGGAC GTCGGCAGAGCAACACAGTTGGACATCGAGGCGGTCTTCCAGGTGCAGGCGGGCGCGGCGGCTGCCGGGAGCGTGGCGGC GGGGGCGGAGGCGCCGTACAACTGCAGCGCGAGCGCCGGCGCGGCGGGGCGGGGCTTGCTCGGCCCGTTCGGGCTGCTCG TGGTGGCCGACGACAGCCTGTCGGAGCAAACCGCCGTCTACTTCTACCTGGTCAGGGGCGCGGACGGGAAGCTCAGCACG CACTTCTGCCAAGACGCCTTCAGGTCATCGAGGGCGAACGATCTCGTCAAGGCCGTTTACGGTAGCTCCGTCCCTGTACT CACCGGAGAAGATCTGTCAGTGAGAATACTGGTTGATCATTCCATCGTGGAGAGCTTTGCGCAGGGCGGGAGGACATGCA TCACATCGCGCGTGTACCCTACGAAGGCCATCTACGACTCTGCCAGAGTTTTCCTCTTCAACAACGCTACGAATGTTAAC GTCACCGCAAAATCGATCAAGATCTGGGAGCTGAATTCAGCCTACATCCGTCCATATCCAGACTCATCATAA |
Ta_2D:486500760-486500768:+ does not have available information here.