
Microexon ID | Ta_2B:779179568-779179576:+ |
Species | Triticum Aestivum | Coordinates | 2B:779179568..779179576 |
Microexon Cluster ID | MEP22 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | Glyco_hydro_32N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | YSKYAMMGRACYGSYTWYCAYTTYCARCCYSMCAARAAYTGGATGAAYGATCCYAAYGGTCCAATGTWYTACAAGGGATKGTACCAYYTSTTCTAYCARTACAAYCCV |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | ACCCGAATG |
Microexon Amino Acid seq | DPNG |
Microexon-tag DNA Seq | GGCAGCAGGCCAGCCTACCACTTCCTGCCCGCCAAGAACTGGCAGAATGACCCGAATGGGCCGATGTACCACAACGGCGTGTACCACCTCTTCTATCAGTACAACCCG |
Microexon-tag Amino Acid Seq | GSRPAYHFLPAKNWQNDPNGPMYHNGVYHLFYQYNP |
Microexon-tag spanning region | 779179346-779182036 |
Microexon-tag prediction score | 0.9427 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | TraesCS2B02G594700.1x |
Reference Transcript ID | TraesCS2B02G594700.1 |
Gene ID | TraesCS2B02G594700 |
Gene Name | NA |
Transcript ID | TraesCS2B02G594700.1 |
Protein ID | |
Gene ID | TraesCS2B02G594700 |
Gene Name | |
Pfam domain motif | Glyco_hydro_32N |
Motif E-value | 1.50E-95 |
Motif start | 47 |
Motif end | 379 |
Protein seq | >TraesCS2B02G594700.1 MARLPVAACIVALHLCLLLLPSSSLRRLSEAESSLVQHGGGSRPAYHFLPAKNWQNDPNGPMYHNGVYHLFYQYNPLGAT WGSGNLSWGHSVSRDLVNWAALNTALDPTAPFDNNGCWSGSATILPGGIPALMYTGRIDAGKEAQVQNVAFPKNLADPLL REWVKPAYNPVISLPADVPGDRFRDPTTAWVGHDSLWRIAVAAKVGGPSGIASTLIYRSKDFRHWKRNTLPLYTSRAAGM VECPDLFPVAEPGVEEGRLGYTPGMASGVVRHVLKLSVMNTTEDYYMVGSYDDAADTFVPELDNERSLDDCRTWRRFDYG HVYASKSFFDVRKNRRVLWAWATESDNMDDDIAKGWSGVQTVPRKVWLDGDGKQLRQWPIEEIETLRSKQVVGLLGAQVN AGGVNKIFGAGAQVDVEAIFEIPYLEDAETLEPNWQLDPQKLCEEKSASVSGGVGPFGLLVMASGDLQEHTAVFFRVFRH NQNYKVLMCTDLTRSNGRDKIYKPPYGGFVDIDIEQHRKSISLRTLIDHSVVESFGGGGRTCITARVYPEHAENNNSHVF VFNNGTGVVKVSRLEAWRMARATVNVVHGR* |
CDS seq | >TraesCS2B02G594700.1 ATGGCCAGACTCCCTGTCGCCGCGTGCATCGTCGCCCTTCACCTTTGCCTTCTCCTCTTGCCGTCTTCCTCACTCCGTCG GCTTTCCGAAGCAGAGAGCTCGCTAGTCCAGCATGGCGGGGGCAGCAGGCCAGCCTACCACTTCCTGCCCGCCAAGAACT GGCAGAATGACCCGAATGGGCCGATGTACCACAACGGCGTGTACCACCTCTTCTATCAGTACAACCCGCTGGGCGCGACG TGGGGCTCCGGCAACCTCTCATGGGGTCACTCCGTCTCCCGAGACCTTGTCAACTGGGCTGCCCTCAACACCGCGCTGGA CCCCACCGCCCCCTTTGACAATAATGGTTGCTGGTCAGGCTCCGCCACAATCCTCCCTGGCGGCATCCCGGCCTTGATGT ACACCGGCCGCATCGACGCCGGCAAGGAGGCGCAGGTGCAGAACGTCGCCTTCCCCAAGAACCTTGCCGACCCGCTTCTC CGCGAGTGGGTCAAGCCCGCATACAACCCTGTGATATCACTCCCAGCCGACGTCCCCGGAGACAGGTTCCGTGACCCAAC CACGGCATGGGTGGGCCACGACAGCTTGTGGCGTATCGCCGTTGCGGCCAAGGTCGGCGGCCCTAGTGGCATTGCCTCCA CGCTCATCTACCGGAGTAAGGACTTTCGACACTGGAAGCGGAACACCTTGCCATTGTACACATCGCGTGCTGCCGGCATG GTCGAGTGCCCGGACCTATTCCCGGTGGCGGAGCCTGGCGTGGAGGAGGGGCGCCTCGGCTACACGCCTGGAATGGCGAG TGGTGTTGTGAGGCATGTGCTGAAGCTGAGCGTGATGAACACGACCGAGGACTACTACATGGTTGGGAGTTACGATGATG CGGCCGACACCTTCGTGCCCGAGCTGGACAACGAGCGCAGCCTCGACGACTGCCGCACCTGGCGCCGCTTTGACTACGGC CATGTGTATGCGTCAAAGTCATTCTTTGACGTGCGCAAGAACAGACGTGTGCTATGGGCATGGGCCACTGAGTCGGACAA CATGGACGACGACATCGCCAAGGGCTGGTCCGGCGTTCAGACGGTTCCGAGGAAGGTGTGGTTGGACGGAGACGGTAAAC AGCTACGGCAGTGGCCCATCGAGGAGATCGAGACGTTGAGGAGTAAACAAGTCGTCGGCTTGCTTGGAGCGCAGGTGAAT GCCGGTGGCGTGAACAAGATCTTTGGCGCGGGTGCGCAGGTTGATGTAGAGGCCATCTTTGAGATCCCATACCTAGAAGA CGCTGAGACTTTGGAGCCCAACTGGCAGTTGGACCCGCAGAAGCTATGCGAGGAGAAGAGTGCGTCCGTGTCGGGTGGGG TCGGCCCGTTCGGGCTACTCGTCATGGCATCCGGCGACCTGCAGGAGCACACCGCTGTCTTCTTTAGAGTGTTTAGACAC AACCAGAACTATAAAGTTCTCATGTGCACCGACCTCACACGATCGAATGGGAGGGACAAGATCTACAAGCCGCCGTATGG AGGGTTTGTGGACATAGACATCGAGCAACACCGGAAGAGCATATCTCTTAGAACTTTGATTGACCATTCGGTGGTGGAGA GCTTTGGAGGAGGGGGGCGGACGTGCATCACGGCCCGGGTGTACCCTGAGCATGCGGAGAACAACAATAGCCATGTGTTC GTGTTCAATAATGGGACCGGCGTCGTGAAGGTGTCTAGGCTCGAGGCATGGAGGATGGCAAGGGCTACCGTAAATGTTGT ACATGGCAGGTGA |
Ta_2B:779179568-779179576:+ does not have available information here.