
Microexon ID | Ta_2B:711724113-711724121:+ |
Species | Triticum Aestivum | Coordinates | 2B:711724113..711724121 |
Microexon Cluster ID | MEP22 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | Glyco_hydro_32N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | YSKYAMMGRACYGSYTWYCAYTTYCARCCYSMCAARAAYTGGATGAAYGATCCYAAYGGTCCAATGTWYTACAAGGGATKGTACCAYYTSTTCTAYCARTACAAYCCV |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | ATCCCAATG |
Microexon Amino Acid seq | DPNG |
Microexon-tag DNA Seq | GGCAGCAGGACCGCCTACCACTTCCAGCCCGCCAAGAACTGGATGAACGATCCCAATGGTCCCATGTACCACAACGGCCTGTACCACTTCTTCTACCAGTACAACCCC |
Microexon-tag Amino Acid Seq | GSRTAYHFQPAKNWMNDPNGPMYHNGLYHFFYQYNP |
Microexon-tag spanning region | 711718145-711726172 |
Microexon-tag prediction score | 0.9694 |
Overlapped with the annotated transcript (%) | 20.21 |
New Transcript ID | TraesCS2B02G516700.2x |
Reference Transcript ID | TraesCS2B02G516700.2 |
Gene ID | TraesCS2B02G516700 |
Gene Name | NA |
Transcript ID | TraesCS2B02G516700.2 |
Protein ID | |
Gene ID | TraesCS2B02G516700 |
Gene Name | |
Pfam domain motif | Glyco_hydro_32N |
Motif E-value | 1.60E-101 |
Motif start | 52 |
Motif end | 370 |
Protein seq | >TraesCS2B02G516700.2 MARLSLAACAVALHLCLLISSSASLRWLSDKSAAVTTAGHGLGHVRTRSAYHFQPAKNWQNDPNGPMYHNGLYHFFYQYN PDGVTWGNGNLSWGHSVSVDLVNWFALDAALQPSRSFDANGCWSGSATILPDGSPVMLYTGIDARGDQVQNVAFPKNASD PLLVEWVKPEYNPVIPVPADIKRDDFRDPSTAWLGADGLWRIAVAARVHDVGGATLIYRSKDFLRWERNADPLYLAHAAG MVECPDLFPVSEPGVEVGLPASGAGARHVLKMSVMDTVQDYYVVGSYDDTADTFVPEDDDDCRSWRRLDYGHVYASKSFF DPSKNRRVLWGWANESDSVADDLVRGWSGVQTVPRKIWLDEDGKQLRQWPVEEIETLRSKRVNLLIPEVNAGGVNEIIGI VGEQADVEVVFEIPALEHADVLEPNWLLDPQSLCGEKGASVPGSVGPFGLLVMASGDMQEHTAVFFRVFRQNDKYKVLMC TDLSRSSTRDGVYKPPYGAFVDMDIEAHGGIISLRTLVDHSVVESFGGGGRTCITARVYPDHVVNGNSHLYVFNNGTGAV KVSSLDAWEMATATVNVLPDGLIAASSVSRAQAY* |
CDS seq | >TraesCS2B02G516700.2 ATGGCCCGGCTCTCTCTCGCGGCGTGCGCCGTCGCCTTGCACCTCTGCCTCCTCATCTCCTCCTCCGCCTCCCTCCGCTG GCTCTCCGACAAATCGGCGGCGGTGACCACGGCCGGCCATGGCCTTGGCCATGTCAGGACCAGGTCCGCCTACCACTTCC AGCCCGCCAAGAACTGGCAGAACGATCCCAATGGTCCCATGTACCACAACGGCCTGTACCACTTCTTCTACCAGTACAAC CCCGACGGCGTGACGTGGGGCAACGGCAACCTGTCGTGGGGCCACTCCGTGTCCGTCGACCTTGTGAACTGGTTCGCCCT GGACGCGGCGCTCCAGCCCAGCCGCTCGTTCGACGCCAACGGCTGCTGGTCGGGCTCCGCCACCATCCTCCCCGACGGCA GCCCCGTCATGCTCTACACCGGCATCGACGCCCGCGGTGACCAGGTCCAGAACGTCGCCTTCCCCAAGAACGCCTCCGAC CCGCTCCTCGTCGAGTGGGTGAAGCCCGAGTACAACCCCGTCATCCCCGTCCCCGCGGACATCAAGCGCGACGACTTCCG TGACCCCTCCACGGCGTGGCTCGGCGCCGACGGCCTGTGGCGCATCGCCGTCGCGGCCCGCGTCCATGATGTTGGGGGCG CCACGCTCATCTACCGGAGCAAGGACTTCCTGCGCTGGGAGCGCAACGCTGACCCGCTTTATTTGGCCCACGCCGCCGGC ATGGTGGAGTGCCCGGACCTGTTCCCGGTGTCTGAGCCCGGAGTGGAGGTTGGGCTCCCGGCGAGCGGCGCCGGGGCGAG GCACGTGCTCAAGATGAGCGTCATGGACACGGTCCAGGACTACTACGTGGTCGGGAGCTACGACGACACGGCGGACACCT TCGTGCCGGAGGACGACGACGACTGCCGGAGCTGGCGCCGCCTGGACTACGGCCACGTGTACGCGTCCAAGTCCTTCTTC GACCCGAGCAAGAACCGGCGCGTCCTCTGGGGCTGGGCCAACGAGTCCGACAGCGTGGCCGACGACCTCGTCAGGGGATG GTCCGGTGTTCAGACTGTTCCGAGGAAGATATGGCTGGACGAAGACGGCAAGCAGCTGCGGCAGTGGCCGGTCGAGGAGA TCGAGACGCTGAGGAGCAAGCGAGTGAACCTGCTGATACCGGAGGTGAACGCCGGCGGCGTGAACGAGATCATCGGCATC GTGGGCGAGCAGGCGGACGTGGAGGTCGTGTTCGAGATCCCGGCCCTGGAGCACGCCGACGTCCTGGAGCCCAACTGGCT GCTGGACCCGCAGAGCCTGTGCGGGGAGAAGGGCGCGTCGGTGCCGGGCAGCGTCGGCCCGTTCGGGCTGCTCGTCATGG CCTCCGGCGACATGCAGGAGCACACCGCCGTCTTCTTCAGGGTGTTCAGGCAGAACGACAAGTACAAGGTCCTCATGTGC ACCGACCTGTCAAGGTCGAGCACCAGAGACGGCGTGTACAAGCCGCCGTACGGGGCCTTCGTGGACATGGACATCGAGGC GCACGGCGGGATCATCTCCCTCAGAACACTGGTTGACCACTCGGTGGTGGAGAGCTTCGGCGGCGGCGGCAGGACGTGCA TCACGGCGAGGGTGTACCCGGACCACGTCGTGAACGGGAACAGCCACCTATATGTGTTCAACAACGGCACCGGCGCCGTC AAGGTGTCCAGCCTCGACGCGTGGGAGATGGCCACGGCGACCGTGAACGTCCTCCCCGACGGGCTGATCGCGGCGAGCTC GGTGAGCAGAGCTCAGGCCTATTAG |
Ta_2B:711724113-711724121:+ does not have available information here.