
Microexon ID | Ta_2A:778798319-778798327:+ |
Species | Triticum Aestivum | Coordinates | 2A:778798319..778798327 |
Microexon Cluster ID | MEP22 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | Glyco_hydro_32N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | YSKYAMMGRACYGSYTWYCAYTTYCARCCYSMCAARAAYTGGATGAAYGATCCYAAYGGTCCAATGTWYTACAAGGGATKGTACCAYYTSTTCTAYCARTACAAYCCV |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | ATCCGAATG |
Microexon Amino Acid seq | DPNG |
Microexon-tag DNA Seq | AGTAGGACGACAGGCTACCATTTCCAGCCCGCCAAGAACTGGCAGAACGATCCGAATGGGCCGATGTACCACAACGGAGTGTACCACCTCTTCTACCAGTACAACCCA |
Microexon-tag Amino Acid Seq | SRTTGYHFQPAKNWQNDPNGPMYHNGVYHLFYQYNP |
Microexon-tag spanning region | 778798145-778799568 |
Microexon-tag prediction score | 0.9552 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | TraesCS2A02G590900.1x |
Reference Transcript ID | TraesCS2A02G590900.1 |
Gene ID | TraesCS2A02G590900 |
Gene Name | NA |
Transcript ID | TraesCS2A02G590900.1 |
Protein ID | |
Gene ID | TraesCS2A02G590900 |
Gene Name | |
Pfam domain motif | Glyco_hydro_32N |
Motif E-value | 6.20E-98 |
Motif start | 75 |
Motif end | 406 |
Protein seq | >TraesCS2A02G590900.1 MARARLPLAACVVAFHLCLLLCPTSSLRRLPEAESVAARHGGSSRTAYHFQPAKPWQNESVAVRHGGSSRTTGYHFQPAK NWQNDPNGPMYHNGVYHLFYQYNPLGATWGKGNLSWGHSVSQDLVNWAALETAIDPTAPFDANGCWSGSATILPGGVPAM LYTGGDADRVQVQNIAFAKNPADPLLREWVKPAYNPVIPHPADVLFNQFRDPSTAWVGSDGMWRILVAAQVGSNNTGIAS TLVYRSKDFRHWERNASPLYTSRAAGMVECPDLFPVAEPGMDEGRLDYAAGTASGAMRHVLKLSVMNTTEDYYAVGQYDN VADTFTPEVDGERIIEDCRTWRRFDYGHVYASKSFFDARKNRRVLWAWVNESDSEDDDIARGWSGLQIVPRKVWLDGDGK QLRQWPVDEIETLRTKRVGHQLVGLHVNTGGVKEITGAGAQAAVEVVFQIPDLEGAETFEPKWLLDPQKLCEERGVSVPG GVGPFGLLVMASGDLREHTSVFFRVFRRSDNYRILMCTDLTRSTRRDKVYKLAYGGFVDMDMEEQGSTISLRTLVDYSVV ESFGGGGRTCMTARVYPEHAEKSNSHVFVFNNGTGGVKVTRLDAWRLKTATVNVVPLRG* |
CDS seq | >TraesCS2A02G590900.1 ATGGCCAGAGCCAGACTCCCTCTTGCCGCTTGCGTCGTCGCGTTCCACCTCTGCCTTCTCCTCTGTCCGACCTCCTCTCT CCGCCGGCTCCCCGAAGCAGAGAGCGTGGCGGCCCGCCATGGCGGGAGCAGCAGGACGGCCTACCACTTCCAGCCAGCCA AGCCCTGGCAGAACGAGAGCGTGGCAGTCCGCCATGGCGGGAGCAGTAGGACGACAGGCTACCATTTCCAGCCCGCCAAG AACTGGCAGAACGATCCGAATGGGCCGATGTACCACAACGGAGTGTACCACCTCTTCTACCAGTACAACCCACTGGGTGC GACATGGGGCAAGGGCAACCTCTCTTGGGGGCATTCGGTCTCCCAGGACCTTGTAAACTGGGCCGCCCTCGAAACTGCGA TTGACCCTACCGCCCCCTTTGACGCCAATGGTTGTTGGTCAGGCTCGGCCACAATTCTCCCTGGGGGCGTCCCAGCCATG CTCTACACCGGCGGCGACGCCGACCGCGTGCAGGTGCAGAATATCGCCTTCGCCAAGAACCCCGCCGACCCGCTGCTCCG CGAGTGGGTGAAGCCCGCCTACAACCCCGTCATCCCGCACCCGGCTGACGTCCTCTTCAACCAGTTCCGCGACCCTAGCA CTGCATGGGTAGGCAGCGATGGCATGTGGCGCATCCTCGTCGCGGCCCAGGTCGGCAGCAACAACACGGGCATTGCCTCC ACGCTCGTCTACCGGAGCAAGGACTTCCGGCATTGGGAGCGGAACGCCTCACCGTTGTACACATCGCGCGCCGCCGGCAT GGTCGAGTGCCCAGACCTGTTTCCGGTGGCGGAGCCCGGCATGGACGAGGGACGCCTCGACTACGCGGCCGGTACGGCGA GTGGTGCCATGAGGCACGTGCTGAAGCTGAGCGTGATGAACACGACCGAGGACTACTACGCGGTTGGGCAGTACGACAAC GTGGCAGACACCTTCACGCCGGAGGTGGACGGCGAGCGCATCATCGAGGACTGCCGGACGTGGCGCCGCTTCGACTACGG CCATGTGTACGCATCCAAGTCCTTCTTCGACGCGCGCAAGAACCGGCGTGTGCTGTGGGCGTGGGTGAACGAGTCCGACA GCGAGGACGACGACATCGCCAGAGGCTGGTCCGGCCTTCAGATTGTTCCAAGGAAGGTGTGGCTTGACGGTGACGGGAAG CAGCTGCGCCAGTGGCCGGTTGATGAGATAGAGACACTGAGGACCAAAAGGGTCGGCCATCAGTTGGTTGGACTGCACGT CAACACCGGTGGGGTGAAGGAGATCACCGGCGCGGGCGCACAGGCGGCCGTGGAGGTCGTCTTCCAGATCCCAGACTTGG AAGGGGCCGAGACCTTCGAGCCCAAGTGGCTGCTGGACCCTCAGAAGCTGTGTGAGGAGAGAGGCGTGTCCGTGCCAGGC GGGGTCGGCCCGTTCGGGCTGCTCGTCATGGCCTCCGGCGACCTGCGGGAGCACACGTCTGTATTCTTCAGGGTGTTCAG ACGCAGCGACAACTACAGAATCCTCATGTGCACCGACCTCACAAGATCCACTCGGAGAGACAAAGTGTACAAGCTGGCGT ATGGAGGATTTGTAGACATGGACATGGAGGAGCAAGGGAGCACCATATCTCTCAGAACACTGGTTGACTATTCGGTGGTG GAAAGTTTCGGAGGCGGGGGGCGGACATGCATGACTGCAAGGGTGTACCCTGAGCACGCAGAGAAGAGCAACAGTCACGT GTTCGTTTTCAACAATGGAACCGGCGGCGTGAAGGTGACCAGGCTTGACGCTTGGAGGCTGAAGACAGCGACCGTGAACG TGGTGCCATTACGCGGATGA |
Ta_2A:778798319-778798327:+ does not have available information here.