
Microexon ID | Ta_2A:777626934-777626942:- |
Species | Triticum Aestivum | Coordinates | 2A:777626934..777626942 |
Microexon Cluster ID | MEP22 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | Glyco_hydro_32N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | YSKYAMMGRACYGSYTWYCAYTTYCARCCYSMCAARAAYTGGATGAAYGATCCYAAYGGTCCAATGTWYTACAAGGGATKGTACCAYYTSTTCTAYCARTACAAYCCV |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | ATCCGAACG |
Microexon Amino Acid seq | DPNG |
Microexon-tag DNA Seq | GGCATCAGGCCCGCCTACCACTTCCTGCCCGCCAAGAACTGGCAGAACGATCCGAACGGGCCAATGTACCACAATGGCGTCTACCACATGTTCTACCAGTACAATCCG |
Microexon-tag Amino Acid Seq | GIRPAYHFLPAKNWQNDPNGPMYHNGVYHMFYQYNP |
Microexon-tag spanning region | 777624780-777627159 |
Microexon-tag prediction score | 0.9426 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | TraesCS2A02G588300.1x |
Reference Transcript ID | TraesCS2A02G588300.1 |
Gene ID | TraesCS2A02G588300 |
Gene Name | NA |
Transcript ID | TraesCS2A02G588300.1 |
Protein ID | |
Gene ID | TraesCS2A02G588300 |
Gene Name | |
Pfam domain motif | Glyco_hydro_32N |
Motif E-value | 3.00E-97 |
Motif start | 48 |
Motif end | 380 |
Protein seq | >TraesCS2A02G588300.1 MAARLPLAACVVAFHLCLLLSPSTALRRLSEAESSLVRHGVGIRPAYHFLPAKNWQNDPNGPMYHNGVYHMFYQYNPLGA MWQPGNLSWGHSVSRDLVNWDALDTALDPTAPFDYNGCWSGSATILPGGIPALLYTGRIDADKEVQVQNVAFPKNPADPL LREWVKPAYNPVIPLPADVPGDNFRDPTTAWVGRDGLWRIAVAAKVGGPNGIASTLIYRSKDFRHWKRNASPLYTSRAAG MVECPDLFPVAEPGVEEGRLGYASGPASGAVRHVLKLSVMNTTQDYYAVGRYDDVADTFVPEVDVERNADDCRTWRRFDY GHVYASKSFFDSSKNRRVLWAWANESDSQDNDIARGWSGVQTVPRKVWLDEDGKQVRQWPIEEIETLRSKRVVGLLGAQV NAGGVNKITGVGAQADVEAIFEIPSLEEAETFQPNWLLDPQKLCEENGASVPGKVGPFGLLVMASSNMQEHTAIFFRVFR HNQKYKVLMCTDLTRSTGRDNVYKPSYGGFVDIDIEQQGRTISLRTLIDHSVVESFGGGGRTCITARVYPEHAENKNSHV FVFNNGTGLVKVSKLEAWRLAMASVNVVHGR* |
CDS seq | >TraesCS2A02G588300.1 ATGGCCGCCAGACTCCCTCTCGCCGCGTGCGTCGTCGCCTTCCACCTCTGCCTTCTCCTCTCGCCGTCCACCGCACTCCG CCGGCTCTCGGAAGCGGAGAGCTCGCTAGTCCGCCATGGCGTGGGCATCAGGCCCGCCTACCACTTCCTGCCCGCCAAGA ACTGGCAGAACGATCCGAACGGGCCAATGTACCACAATGGCGTCTACCACATGTTCTACCAGTACAATCCGCTGGGCGCA ATGTGGCAGCCCGGCAACCTCTCATGGGGTCATTCCGTCTCCCGCGACCTCGTGAACTGGGACGCTCTTGACACCGCGCT CGACCCCACCGCCCCCTTCGACTATAATGGCTGTTGGTCAGGCTCCGCCACAATCCTCCCAGGCGGCATCCCGGCCTTGC TGTACACCGGCCGCATCGACGCCGACAAGGAGGTGCAGGTGCAAAATGTTGCCTTCCCCAAGAACCCTGCCGACCCGCTC CTCCGCGAGTGGGTCAAGCCTGCCTACAACCCCGTCATACCACTCCCAGCCGACGTCCCTGGAGACAACTTCCGCGACCC GACCACGGCGTGGGTAGGCCGCGACGGCCTATGGCGTATCGCCGTTGCAGCCAAGGTCGGCGGCCCCAATGGCATTGCCT CCACGCTCATCTACCGGAGTAAGGACTTTCGGCACTGGAAGCGGAATGCCTCGCCATTGTACACATCGCGTGCTGCGGGC ATGGTCGAATGCCCGGACTTATTCCCGGTGGCGGAGCCTGGCGTGGAGGAGGGGCGACTTGGCTACGCGTCCGGACCAGC GAGCGGTGCTGTGAGGCACGTGCTGAAGTTGAGTGTGATGAACACAACCCAAGACTACTACGCGGTCGGCAGGTATGATG ACGTGGCGGACACCTTTGTGCCGGAGGTGGATGTAGAGCGCAACGCCGACGATTGCCGGACCTGGCGCCGCTTCGACTAC GGGCACGTGTATGCATCAAAGTCCTTCTTCGACTCAAGCAAGAACCGGCGCGTGCTATGGGCATGGGCCAATGAGTCCGA CAGCCAGGACAACGACATCGCCAGGGGCTGGTCCGGCGTTCAGACGGTTCCGAGGAAGGTGTGGCTGGACGAAGACGGTA AGCAGGTAAGGCAGTGGCCGATCGAGGAGATCGAGACATTGAGGAGCAAACGAGTTGTCGGCTTGCTAGGAGCGCAGGTG AATGCCGGTGGCGTGAACAAGATCACTGGTGTGGGCGCGCAGGCTGACGTGGAGGCCATCTTCGAGATCCCATCCCTAGA AGAGGCTGAGACTTTCCAGCCCAACTGGCTACTGGACCCCCAAAAGCTATGCGAGGAGAATGGTGCGTCCGTGCCAGGCA AGGTCGGCCCATTCGGGCTGCTCGTCATGGCCTCCAGCAACATGCAGGAGCACACGGCTATCTTCTTCAGAGTGTTCAGA CACAACCAGAAGTACAAAGTTCTCATGTGCACCGACCTCACAAGATCGACTGGGAGGGACAACGTGTACAAGCCGTCATA TGGAGGGTTTGTGGACATAGACATCGAGCAGCAAGGGAGGACCATATCTCTTAGAACATTGATTGACCATTCGGTAGTGG AAAGCTTTGGAGGTGGGGGCCGGACATGCATCACGGCACGGGTGTACCCTGAGCACGCGGAGAACAAAAATAGCCATGTG TTCGTGTTCAATAATGGGACCGGACTCGTGAAGGTGTCCAAGCTCGAGGCATGGAGGCTGGCGATGGCTTCTGTAAACGT TGTGCATGGCAGGTGA |
Ta_2A:777626934-777626942:- does not have available information here.