
Microexon ID | Ta_2A:723061282-723061290:+ |
Species | Triticum Aestivum | Coordinates | 2A:723061282..723061290 |
Microexon Cluster ID | MEP22 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | Glyco_hydro_32N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | YSKYAMMGRACYGSYTWYCAYTTYCARCCYSMCAARAAYTGGATGAAYGATCCYAAYGGTCCAATGTWYTACAAGGGATKGTACCAYYTSTTCTAYCARTACAAYCCV |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | ATCCGAATG |
Microexon Amino Acid seq | DPNG |
Microexon-tag DNA Seq | CATGGCCGGACCGCCTACCACTTCCAGCCCGCCAAGAACTGGCAGAACGATCCGAATGGGCCAATGTACCACAACGGCGTGTACCACTTGTTCTACCAGTACAACCCG |
Microexon-tag Amino Acid Seq | HGRTAYHFQPAKNWQNDPNGPMYHNGVYHLFYQYNP |
Microexon-tag spanning region | 723061125-723061510 |
Microexon-tag prediction score | 0.9632 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | TraesCS2A02G489000.1x |
Reference Transcript ID | TraesCS2A02G489000.1 |
Gene ID | TraesCS2A02G489000 |
Gene Name | NA |
Transcript ID | TraesCS2A02G489000.1 |
Protein ID | |
Gene ID | TraesCS2A02G489000 |
Gene Name | |
Pfam domain motif | Glyco_hydro_32N |
Motif E-value | 2.80E-100 |
Motif start | 46 |
Motif end | 369 |
Protein seq | >TraesCS2A02G489000.1 MAVLSLAACVASFHLLLLFSSSSSLRVAPEAAESSGSARHGRTAYHFQPAKNWQNDPNGPMYHNGVYHLFYQYNPHGATW GVGNLSWGHSVSGDLVNWAALDAALEPTSPFDANGCWSGSATILPGGVPAILYTGIRADGEQVQNVAFPKNASDPLLREW VKPSYNPVIPLPADVPADFFRDPSTAWLGRDGLWRLAVSAKVGNAVGSTLIYRSKDFRLWERNAAPLQESRAAGMVECPD LFPVAEPGAEEGLDHAPRTGTGVKHVLKLSATDTTFQDYYAVGRYNDTTDTFVPEDDGDDCQSWRRLDYGHIYASKSFFD ARKNRRVLWSWANETDSQADDVAKGWSGVQIFPRKVWLDNDGKQLRQWPIEEIETLRSRKAGLLGTVVNSGGVNEIVGIA GTQADVEVIFEIPALEGAERFEPNWLLDPQRLCGEKGASVQGGVGPFGLLLMASGDMQEHTAVFFRVFRHHDKYKVLMCT DLSRSTTRAGVYKPPYGAFVEMDIEEHGRIISLRTLVDHSVVESFGGGGRTCITARVYPEHAENGDSHLYVFNNGTGAVK VAKLDAYELATATVNVGDDGLIQPSSMRRGEA* |
CDS seq | >TraesCS2A02G489000.1 ATGGCTGTGCTCTCTCTCGCCGCGTGCGTCGCCTCCTTCCATCTCCTCCTCCTCTTCTCTTCGTCTTCCTCTCTCCGGGT AGCCCCCGAAGCGGCGGAGAGCTCGGGATCGGCGCGCCATGGCCGGACCGCCTACCACTTCCAGCCCGCCAAGAACTGGC AGAACGATCCGAATGGGCCAATGTACCACAACGGCGTGTACCACTTGTTCTACCAGTACAACCCGCACGGCGCCACCTGG GGCGTCGGCAACCTCTCCTGGGGCCACTCCGTCTCCGGCGACCTCGTGAACTGGGCCGCCCTCGACGCCGCGCTCGAGCC GACCTCGCCGTTCGACGCCAACGGCTGCTGGTCCGGCTCCGCCACCATCCTCCCCGGCGGCGTCCCGGCCATCCTATACA CCGGCATCCGCGCCGACGGCGAGCAGGTCCAGAACGTGGCCTTCCCCAAGAACGCGTCCGACCCGCTCCTCCGCGAGTGG GTGAAGCCGAGCTACAACCCCGTCATCCCGCTCCCCGCTGACGTCCCTGCGGATTTCTTCCGCGACCCTTCCACGGCGTG GCTCGGCCGCGACGGTCTGTGGCGCCTCGCCGTCTCGGCCAAGGTCGGCAACGCCGTGGGGTCTACGCTCATCTACCGAA GCAAGGACTTCCGGCTGTGGGAGCGGAATGCCGCGCCGCTGCAAGAGTCACGCGCCGCCGGCATGGTGGAGTGCCCGGAC CTGTTCCCCGTGGCGGAGCCCGGCGCGGAGGAGGGGCTCGACCACGCGCCGAGGACCGGCACCGGGGTGAAGCACGTGCT GAAGCTGAGCGCGACGGACACGACGTTCCAGGACTACTACGCGGTCGGGCGTTACAACGACACGACGGACACCTTTGTAC CGGAAGACGACGGCGACGACTGCCAGAGCTGGCGCCGCCTCGACTACGGCCACATCTACGCGTCCAAGTCCTTCTTCGAC GCGCGCAAGAACCGGCGCGTGCTCTGGTCATGGGCCAACGAGACCGACAGCCAGGCCGACGACGTCGCCAAGGGTTGGTC CGGCGTCCAGATCTTCCCACGGAAAGTTTGGCTGGACAACGACGGGAAGCAGCTGAGGCAATGGCCAATCGAGGAGATCG AGACGCTGAGGAGCAGAAAGGCCGGGCTGCTGGGAACGGTGGTGAACTCCGGCGGCGTGAACGAGATCGTCGGCATCGCG GGCACGCAGGCGGACGTGGAGGTGATCTTCGAGATCCCGGCCCTGGAGGGCGCCGAGAGGTTCGAGCCCAACTGGCTGCT GGATCCGCAGAGGCTGTGCGGGGAGAAGGGCGCGTCCGTGCAGGGCGGGGTCGGCCCGTTCGGGCTGCTCCTCATGGCCT CCGGCGACATGCAGGAGCACACCGCCGTCTTCTTCAGGGTGTTCAGGCACCATGACAAGTACAAGGTCCTCATGTGCACC GACCTGAGCAGGTCGACTACGAGAGCCGGGGTGTACAAGCCGCCGTACGGGGCTTTCGTGGAGATGGACATCGAGGAGCA CGGGAGAATCATATCACTCAGAACACTGGTCGACCACTCCGTGGTGGAGAGCTTCGGCGGTGGAGGCCGGACGTGCATCA CGGCGAGGGTGTACCCGGAGCACGCCGAGAACGGCGACAGCCACCTGTACGTGTTCAACAACGGGACAGGTGCGGTGAAA GTGGCCAAGCTCGACGCGTACGAGCTGGCGACGGCGACCGTGAACGTTGGGGACGACGGGTTGATTCAGCCGAGCTCCAT GCGCAGAGGCGAAGCGTAG |
Ta_2A:723061282-723061290:+ does not have available information here.