
Microexon ID | Ta_2A:508031213-508031221:+ |
Species | Triticum Aestivum | Coordinates | 2A:508031213..508031221 |
Microexon Cluster ID | MEP22 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | Glyco_hydro_32N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | YSKYAMMGRACYGSYTWYCAYTTYCARCCYSMCAARAAYTGGATGAAYGATCCYAAYGGTCCAATGTWYTACAAGGGATKGTACCAYYTSTTCTAYCARTACAAYCCV |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | ATCCCAACG |
Microexon Amino Acid seq | DPNA |
Microexon-tag DNA Seq | GAGCTGAGCACGGGGTACCACTTCCGGCCGATAAAGAACTGGATCAACGATCCCAACGCGCCCATGTTCTACAAGGGGTGGTACCATTTCTTCTATCAGTACAACCCC |
Microexon-tag Amino Acid Seq | ELSTGYHFRPIKNWINDPNAPMFYKGWYHFFYQYNP |
Microexon-tag spanning region | 508030609-508031601 |
Microexon-tag prediction score | 0.9538 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | TraesCS2A02G295400.1x |
Reference Transcript ID | TraesCS2A02G295400.1 |
Gene ID | TraesCS2A02G295400 |
Gene Name | NA |
Transcript ID | TraesCS2A02G295400.1 |
Protein ID | |
Gene ID | TraesCS2A02G295400 |
Gene Name | |
Pfam domain motif | Glyco_hydro_32N |
Motif E-value | 4.10E-102 |
Motif start | 129 |
Motif end | 448 |
Protein seq | >TraesCS2A02G295400.1 MPQEKSLFISEFVAFCLTLQTLNFQAFQRSNSPSATASHYKYDPPWPLLLHRHRSFSTCSSSHRRPLCPSVRAMVVLGGR VAWACSVLLLLQLAGASHVVYETHLLEAEAAAADVPPSILDPELSTGYHFRPIKNWINDPNAPMFYKGWYHFFYQYNPKG AVWGNIVWAHSVSRDLINWVALETAIQPSIKSDKYGCWSGSATILRDGTPAIMYTGIDRGDINYEVQNIAFPKNKSDPLL REWVKPKSNPIIVPEGGINATQFRDPTTAWYADGHWRLLIGALSGASRGVAYVYRSRDFMRWTRVRKPLHSAPTGMWECP DLYPVTVDGRQNGLDTSVTSSPKVKHVLKNSLDLRRYDYYTVGTYDRKTERYVPDNPAGDEHHLRYDYGNFYASKTFYDP VKRRRILWGWANESDTAVDDVAKGWAGIQAIPRKVWLDPSGRQLMQWPVEELEALRAKKPVSLKDRVVKRGEHVEVTGLR SSQADVEVSFEVPSLEGAEALDPALANDAQKLCSVRGADVEGGVGPFGLWVLASSKLEEKTAVFFQVFKAARNINSTKPV VLMCSDPTTSSLNPNLYKPTFAGFVDTDIAKGKISLRSLIDRSVIESFGAGGRTCILSRVYPTLALGKNAHLHVFNNGKA DIKVSQLTAWEMKKPALMNGA* |
CDS seq | >TraesCS2A02G295400.1 ATGCCCCAGGAAAAATCTCTCTTCATTTCTGAATTCGTGGCCTTTTGTCTCACCCTGCAAACTTTAAACTTTCAGGCTTT TCAGCGCTCGAATAGCCCCAGCGCTACGGCCTCGCACTATAAATATGACCCCCCCTGGCCTCTGCTTCTGCACAGACATC GATCTTTCTCTACTTGTTCTTCTTCCCATCGCCGGCCTCTGTGCCCCAGTGTGAGAGCAATGGTAGTTCTCGGGGGAAGA GTTGCATGGGCATGCTCGGTGCTGCTGCTGTTGCAGCTCGCCGGGGCGTCGCATGTCGTCTACGAGACCCACCTCCTGGA GGCGGAGGCGGCGGCGGCCGACGTGCCGCCTTCGATTCTTGACCCCGAGCTGAGCACGGGGTACCACTTCCGGCCGATAA AGAACTGGATCAACGATCCCAACGCGCCCATGTTCTACAAGGGGTGGTACCATTTCTTCTATCAGTACAACCCCAAGGGG GCGGTGTGGGGCAACATCGTGTGGGCGCACTCGGTGTCGCGCGACCTCATCAACTGGGTGGCGCTGGAGACGGCCATCCA GCCCAGCATCAAGTCCGACAAGTACGGCTGCTGGTCGGGCTCGGCCACCATCCTGCGCGACGGCACGCCGGCGATCATGT ACACGGGCATCGACCGCGGCGACATCAACTACGAGGTGCAGAACATCGCCTTCCCCAAGAACAAGTCGGACCCGCTGCTC CGCGAGTGGGTCAAGCCCAAGAGCAACCCGATCATCGTGCCGGAGGGCGGCATCAACGCCACCCAATTCCGGGACCCGAC CACCGCGTGGTACGCCGACGGCCACTGGCGGCTGCTCATCGGCGCCCTCTCTGGCGCGTCCCGCGGCGTGGCGTACGTGT ACCGGAGCCGCGACTTCATGCGGTGGACGCGGGTGAGGAAGCCGCTGCACTCGGCGCCCACGGGGATGTGGGAGTGCCCG GACCTGTACCCGGTCACGGTGGACGGCCGGCAGAACGGGCTCGACACCTCCGTCACGTCCAGCCCCAAGGTGAAGCACGT GCTGAAGAACAGCCTCGACCTGCGCCGCTACGACTACTACACCGTCGGCACCTACGACCGGAAGACGGAGCGGTACGTGC CGGACAACCCCGCCGGCGACGAGCACCACCTGCGGTACGACTACGGCAACTTCTACGCCTCCAAGACGTTCTACGACCCC GTCAAGCGCCGCCGCATCCTCTGGGGCTGGGCCAACGAGTCCGACACCGCCGTCGACGACGTCGCCAAGGGATGGGCCGG AATCCAGGCGATTCCGAGGAAGGTTTGGCTGGACCCGAGTGGGAGGCAGCTGATGCAGTGGCCCGTGGAGGAGCTTGAGG CGCTGAGGGCGAAAAAGCCGGTGAGTCTCAAGGACCGGGTGGTGAAGCGGGGAGAGCACGTCGAGGTCACCGGGCTACGA AGCTCACAGGCTGACGTCGAGGTGAGCTTTGAGGTGCCGAGCCTGGAGGGAGCGGAGGCGCTGGACCCGGCGCTAGCCAA CGACGCCCAGAAGCTGTGCAGCGTGAGGGGTGCCGACGTGGAAGGCGGCGTGGGCCCCTTCGGTCTGTGGGTGCTCGCCT CGTCCAAGCTGGAGGAGAAGACGGCGGTCTTCTTCCAGGTGTTCAAGGCCGCGCGCAACATCAACAGCACCAAGCCGGTG GTCCTCATGTGCTCCGACCCCACCACGTCATCTTTGAACCCGAACCTCTACAAGCCGACGTTCGCAGGCTTTGTTGATAC TGACATAGCGAAGGGCAAGATATCTCTGAGGAGCCTGATTGATCGGTCCGTCATCGAGAGCTTCGGGGCAGGAGGCAGGA CCTGCATCCTCTCCCGGGTTTATCCAACGCTCGCCCTAGGCAAGAACGCTCACCTTCATGTTTTCAACAACGGCAAGGCG GACATCAAGGTGTCACAGCTCACGGCGTGGGAGATGAAGAAGCCAGCGCTCATGAACGGTGCTTAG |
Ta_2A:508031213-508031221:+ does not have available information here.