
Microexon ID | Ta_1B:645548855-645548863:+ |
Species | Triticum Aestivum | Coordinates | 1B:645548855..645548863 |
Microexon Cluster ID | MEP22 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | Glyco_hydro_32N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | YSKYAMMGRACYGSYTWYCAYTTYCARCCYSMCAARAAYTGGATGAAYGATCCYAAYGGTCCAATGTWYTACAAGGGATKGTACCAYYTSTTCTAYCARTACAAYCCV |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | ATCCAAATG |
Microexon Amino Acid seq | DPNG |
Microexon-tag DNA Seq | TTGCTCAGGACAGGGTATCACTTCCAGCCGCCCAAAAACTGGATTAACGATCCAAATGGGCCACTATACTACAAGGGATGGTACCACTTGTTTTACCAGTACAACCCC |
Microexon-tag Amino Acid Seq | MLRTGYHFQPPKNWINDPNGPLYYKGWYHLFYQYNP |
Microexon-tag spanning region | 645548218-645550514 |
Microexon-tag prediction score | 0.9688 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | TraesCS1B02G422700.1x |
Reference Transcript ID | TraesCS1B02G422700.1 |
Gene ID | TraesCS1B02G422700 |
Gene Name | NA |
Transcript ID | TraesCS1B02G422700.1 |
Protein ID | |
Gene ID | TraesCS1B02G422700 |
Gene Name | |
Pfam domain motif | Glyco_hydro_32N |
Motif E-value | 8.70E-98 |
Motif start | 47 |
Motif end | 363 |
Protein seq | >TraesCS1B02G422700.1 MWNPLWVLGPWLLLLLLQLADGSMEAVAPSPSVPSFVTNPLLRTGYHFQPPKNWINDPNGPLYYKGWYHLFYQYNPKGAD WVNTLWAHSVSRDLINWNVLGLALEPSIRSDHYGVWSGSATILLDGTPVLVYTGINRADTPYQVQNVAIPKNKSDPLLRE WVKPDYNPIIVPDSGMNVTQFRDPSTAWHIDGQWRILVGGEKGSQGQAYVYWSTDFKHWVRAKHPLHSAINGMWECLDFF PVLVQGKKGLDTSEHSGRVKYVLKSSLEKARYDYYTIGTYNNRTERYVPDDLNGDYHRLRYDYGKFYASKTFFDPAKQRR VLVGWANESDTIPDDIAKGWSGIHAIPRKIWLDPGGKQLVQWPIEEVEQLRRKSVGVTNKVVKPRNHFEVKGLETYQADV EVSFEIPSLERAEPFDHAFSNDAQKLCRMKGADKKGGVGPFGLWVLASANLEEKTAVFFRIFRDGHGKPVVLMCTDPTKS SLGRDLDKPTYAGFVNVNVSSSGEISLRSLIDHSVVESFGAGGRTCIISRVYPSIAIGQNAHLYVFNNGDVDVKVSRLKA WEMQSSKMINSA* |
CDS seq | >TraesCS1B02G422700.1 ATGTGGAATCCGCTATGGGTCCTCGGGCCATGGTTGCTACTGCTCCTTCTGCAGCTCGCCGACGGCAGCATGGAGGCCGT GGCGCCCTCGCCGTCAGTGCCTAGCTTCGTGACCAACCCCTTGCTCAGGACAGGGTATCACTTCCAGCCGCCCAAAAACT GGATTAACGATCCAAATGGGCCACTATACTACAAGGGATGGTACCACTTGTTTTACCAGTACAACCCCAAAGGTGCCGAT TGGGTGAATACACTTTGGGCTCACTCGGTTTCACGCGACCTCATCAACTGGAATGTTCTTGGTTTAGCCCTCGAGCCAAG CATCCGATCTGACCACTATGGCGTTTGGTCCGGCTCCGCAACAATCCTCCTTGATGGCACACCAGTGTTGGTGTACACAG GGATCAACAGGGCAGACACTCCCTACCAGGTGCAGAACGTTGCCATCCCCAAGAACAAGTCGGACCCACTACTTAGGGAG TGGGTCAAACCAGACTACAATCCGATCATAGTGCCAGATTCGGGCATGAACGTGACACAATTTCGTGACCCGAGCACGGC TTGGCACATAGATGGCCAATGGCGCATACTCGTAGGTGGAGAGAAGGGCTCCCAGGGTCAGGCATATGTGTATTGGAGCA CCGACTTCAAGCATTGGGTTCGAGCCAAGCACCCACTTCACTCCGCAATCAACGGTATGTGGGAGTGCCTCGACTTCTTT CCGGTGCTCGTGCAAGGGAAGAAAGGTCTCGACACATCCGAGCATAGTGGCAGAGTCAAGTATGTGCTCAAGAGTAGCCT CGAGAAGGCTCGGTATGACTACTACACCATCGGAACCTATAATAATAGGACTGAGCGTTATGTGCCCGATGATCTAAATG GTGACTACCACCGCCTCCGCTACGACTATGGGAAATTCTATGCGTCCAAGACATTCTTCGACCCCGCAAAGCAGAGACGG GTCCTTGTAGGATGGGCCAATGAGTCAGACACCATTCCAGACGACATCGCCAAGGGTTGGTCCGGCATTCATGCAATCCC AAGGAAGATATGGCTTGACCCCGGTGGCAAGCAGCTCGTGCAGTGGCCCATTGAGGAGGTCGAGCAGCTGAGGCGTAAGT CTGTTGGTGTGACAAACAAGGTCGTGAAGCCTAGGAATCATTTTGAGGTTAAAGGCCTGGAGACTTACCAGGCTGATGTG GAGGTGAGTTTCGAGATACCAAGCCTGGAAAGGGCCGAGCCGTTCGATCATGCATTCTCGAACGATGCTCAGAAGCTGTG TAGAATGAAGGGTGCGGATAAGAAGGGCGGAGTAGGTCCCTTTGGTTTGTGGGTGCTAGCATCTGCCAACTTGGAGGAGA AGACCGCGGTTTTCTTCAGGATTTTCAGGGATGGTCATGGCAAGCCAGTGGTCCTGATGTGCACTGACCCTACCAAGTCA TCTCTCGGTCGTGATCTTGACAAGCCAACTTATGCCGGGTTTGTCAACGTCAATGTTTCATCATCCGGCGAGATCTCTTT GAGAAGCTTGATTGATCATTCAGTCGTTGAGAGCTTTGGTGCTGGAGGCAGGACCTGCATCATATCAAGGGTGTACCCAT CCATCGCCATAGGGCAAAACGCTCATCTTTACGTCTTCAACAATGGAGATGTGGATGTCAAGGTGTCGCGCCTCAAGGCC TGGGAAATGCAGAGTTCCAAGATGATTAATAGTGCTTAA |
Ta_1B:645548855-645548863:+ does not have available information here.