
Microexon ID | Sm_GL377684:264957-264965:- |
Species | Selaginella moellendorffii | Coordinates | GL377684:264957..264965 |
Microexon Cluster ID | MEP22 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | Glyco_hydro_32N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | YSKYAMMGRACYGSYTWYCAYTTYCARCCYSMCAARAAYTGGATGAAYGATCCYAAYGGTCCAATGTWYTACAAGGGATKGTACCAYYTSTTCTAYCARTACAAYCCV |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | ATCCAAATG |
Microexon Amino Acid seq | DPNG |
Microexon-tag DNA Seq | TGGCAGCGCACGGGATTCCACTTCCAGCCAGTGAAGAACTGGATGAACGATCCAAATGGACCGATGCTCTACAAAGGATTGTATCACCTCTTCTTCCAGTACAATCCC |
Microexon-tag Amino Acid Seq | WQRTGFHFQPVKNWMNDPNGPMLYKGLYHLFFQYNP |
Microexon-tag spanning region | 255284-265115 |
Microexon-tag prediction score | 0.9607 |
Overlapped with the annotated transcript (%) | 41.67 |
New Transcript ID | EFJ07564x |
Reference Transcript ID | EFJ07564 |
Gene ID | SELMODRAFT_429742 |
Gene Name | NA |
Sm_GL377684:264957-264965:- does not have available information here.
Microexon DNA seq | ATCCAAATG |
Microexon Amino Acid seq | DPNG |
Microexon-tag DNA Seq | TGGCAGCGCACGGGATTCCACTTCCAGCCAGTGAAGAACTGGATGAACGATCCAAATGGTCCCCTGTTTTACAAAGGCGTGTATCATCTCTTCTATCAATGGAACCCC |
Microexon-tag Amino Acid seq | WQRTGFHFQPVKNWMNDPNGPLFYKGVYHLFYQWNP |
Transcript ID | Sm.29659.1 |
Gene ID | Sm.29659 |
Gene Name | NA |
Pfam domain motif | Glyco_hydro_32N |
Motif E-value | 6e-100 |
Motif start | 58 |
Motif end | 380 |
Protein seq | >Sm.29659.1 MAPLPSSLVPFSLLFFALLPSILSLPDRYDVQTLAAIDQSPDSQRNDLDWEWQRTGFHFQPVKNWMNDPNGPLFYKGVYH LFYQWNPYAAVWGNITWGHAVSTDLIHWKYVKELALVPDRWYDIKGVWSGSATIVNGKPILLYTGWTNSSTQVQNKAVPK NSSDPLLREWIKVDAENPFAVPPPGINTSDFRDPTTAWIGQDGLWRTAVGSKYRANDTGIILQYRSKDFAKWELLDESLH AVNGTGMWECPDFFPVAVHGQQGSENYLGEENAIQKFVIKVSLDETRFDTYVVGDYDPASEKFLPSFEALDIGTALRYDY GIYYASKSFYDPHKKRRVLLGWINEADKPTSDIRKGWASVQAIPRVVWLDENQHSLRQWPVPEINSLRKHPIRHTDLLLK QGEVFKVNGSQGSQLDIEVTFQIPKAHANDESDEFNFASSRVEGIPNNTLIYCNGSFPEAEQIIGPFGVHVLASEDLRER TSVFFKFLKFKGSWKTMVCNDLTSSSLASDATKGVYGGLVSLSSYKNRQALTMRILVDHSIVETFAQGGRTCITARSYPL LGSDNNAHIFVFNNGSLPVKATHLAVWKMDKIRYTTV* |
CDS seq | >Sm.29659.1 ATGGCTCCTCTTCCCTCCTCCTTGGTCCCCTTTTCCTTGCTGTTCTTCGCCCTTCTCCCTTCGATTCTGTCCCTCCCCGA TCGATACGACGTGCAGACGCTCGCGGCGATCGATCAATCCCCGGATTCACAGAGGAACGATCTCGATTGGGAATGGCAGC GCACGGGATTCCACTTCCAGCCAGTGAAGAACTGGATGAACGATCCAAATGGTCCCCTGTTTTACAAAGGCGTGTATCAT CTCTTCTATCAATGGAACCCCTACGCTGCCGTGTGGGGGAACATCACTTGGGGCCACGCTGTCTCCACGGATCTAATCCA CTGGAAGTACGTGAAGGAGCTAGCTCTCGTGCCGGATCGATGGTATGACATCAAGGGCGTGTGGTCGGGATCCGCGACGA TCGTCAATGGCAAGCCCATTCTTCTCTATACTGGATGGACAAATTCCTCCACGCAAGTCCAAAACAAGGCTGTGCCCAAG AACTCCTCCGATCCGCTACTGCGCGAATGGATCAAAGTCGACGCGGAGAATCCTTTCGCGGTGCCGCCGCCGGGGATCAA TACCAGCGATTTCCGGGACCCGACGACGGCGTGGATTGGGCAAGATGGGCTATGGCGTACTGCAGTGGGATCCAAGTATC GCGCCAACGACACAGGGATCATCCTGCAGTACCGCAGCAAGGATTTCGCGAAATGGGAGCTCCTGGATGAATCGCTCCAC GCGGTGAATGGGACGGGGATGTGGGAGTGCCCGGATTTCTTCCCGGTTGCGGTCCATGGCCAGCAGGGCTCGGAGAACTA TCTTGGCGAGGAGAATGCGATCCAGAAGTTCGTGATCAAGGTCAGCCTGGATGAGACGCGATTTGACACGTATGTGGTGG GCGATTACGACCCGGCGTCGGAGAAGTTCTTGCCCAGCTTCGAGGCGCTCGATATTGGAACGGCGCTGCGCTATGACTAT GGGATTTACTACGCGTCCAAGTCGTTCTATGATCCTCACAAGAAGAGGAGAGTTTTGCTAGGATGGATCAACGAGGCCGA CAAGCCCACGTCGGACATTCGCAAGGGATGGGCTTCTGTCCAGGCAATTCCCAGAGTTGTATGGCTCGACGAAAACCAGC ATTCCCTTCGGCAGTGGCCCGTGCCAGAGATCAATTCTCTAAGAAAGCATCCAATTCGTCATACAGATTTGCTCTTGAAG CAGGGAGAAGTTTTCAAAGTAAATGGCTCTCAAGGATCGCAGCTCGATATCGAGGTGACTTTCCAAATCCCAAAGGCTCA CGCCAACGATGAGAGCGATGAATTTAACTTTGCATCGTCCAGAGTCGAGGGAATTCCAAACAACACTCTCATATACTGCA ATGGCAGCTTTCCAGAGGCCGAGCAGATAATCGGCCCGTTCGGAGTCCACGTCCTTGCGTCGGAGGATCTACGTGAGAGA ACTTCCGTGTTCTTTAAGTTCCTCAAGTTCAAAGGTTCCTGGAAAACTATGGTTTGCAACGATCTCACAAGCTCTTCCCT GGCATCTGATGCTACAAAAGGCGTCTACGGTGGACTAGTAAGCCTCTCGAGCTACAAGAATCGTCAGGCTTTGACAATGA GAATCTTGGTGGATCATTCCATCGTCGAAACGTTTGCTCAAGGCGGCAGGACGTGCATCACTGCTCGATCCTATCCTCTT CTCGGGAGCGACAACAACGCTCATATATTCGTGTTCAACAATGGAAGTCTTCCAGTCAAGGCAACACACTTGGCTGTGTG GAAGATGGATAAGATTCGCTACACCACAGTCTAG |