Microexon ID Sl_3:55282840-55282848:-
Species Solanum   Lycopersicum
Coordinates 3:55282840..55282848
Microexon Cluster ID MEP22
Size 9
Phase 1
Pfam Domain Motif Glyco_hydro_32N
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 49,9,50
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq YSKYAMMGRACYGSYTWYCAYTTYCARCCYSMCAARAAYTGGATGAAYGATCCYAAYGGTCCAATGTWYTACAAGGGATKGTACCAYYTSTTCTAYCARTACAAYCCV
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq ATCCTAATG
Microexon Amino Acid seq DPNG
Microexon-tag DNA Seq TGGCAAAGAACGGCTTACCATTTTCAACCTCAAAAAAATTGGATGAACGATCCTAATGGACCATTGTATCACAAGGGATGGTACCACCTTTTTTATCAATACAATCCA
Microexon-tag Amino Acid Seq WQRTAYHFQPQKNWMNDPNGPLYHKGWYHLFYQYNP
Microexon-tag spanning region55281413-55283064
Microexon-tag prediction score0.9644
Overlapped with the annotated transcript (%) 100
New Transcript ID Solyc03g083910.3.1x
Reference Transcript ID Solyc03g083910.3.1
Gene ID Solyc03g083910.3
Gene Name NA
Transcript ID Solyc03g083910.3.1
Protein ID
Gene ID Solyc03g083910.3
Gene Name
Pfam domain motif Glyco_hydro_32N
Motif E-value 1.00E-103
Motif start 152
Motif end 471
Protein seq >Solyc03g083910.3.1
NPKCTSNYKSPFVTQFRWSQSFSVFITYIYSSRLVASPIPLSSIMATQCYDPENSASRYTLLPDQPDSGHRKSLKIISGI
FLSVFLLLSVAFFPILNNQSPDLQIDSRSPAPPSRGVSQGVSDKTFRDVAGASHVSYAWSNAMLSWQRTAYHFQPQKNWM
NDPNGPLYHKGWYHLFYQYNPDSAIWGNITWGHAVSKDLIHWLYLPFAMVPDQWYDINGVWTGSATILPDGQIMMLYTGD
TDDYVQVQNLAYPANLSDPLLLDWVKFKGNPVLVPPPGIGVKDFRDPTTAWTGPQNGQWLLTIGSKIGKTGVALVYETSN
FTSFKLLDGVLHAVPGTGMWECVDFYPVSTKKTNGLDTSYNGPGVKHVLKASLDDNKQDHYAIGTYDLGKNKWTPDNPEL
DCGIGLRLDYGKYYASKTFYDPKKERRVLWGWIGETDSESADLQKGWASVQSIPRTVLYDKKTGTHLLQWPVEEIESLRV
GDPTVKQVDLQPGSIELLRVDSAAELDIEASFEVDKVALQGIIEADHVGFSCSTSGGAASRGILGPFGVIVIADQTLSEL
TPVYFYISKGADGRAETHFCADQTRFAFLSGTINLSLSSEAPGVGKQVYGSSVPVLDGEKHSMRLLVDHSIVESFAQGGR
TVITSRIYPTKAVNGAARLFVFNNATGASVTASVKIWSLESANIQSFPLQDL*
CDS seq >Solyc03g083910.3.1
AATCCCAAGTGTACCTCAAATTATAAAAGTCCTTTTGTTACTCAATTTCGTTGGTCCCAGTCATTTTCTGTGTTCATCAC
CTATATATATAGCAGTAGACTAGTAGCTTCTCCCATTCCTCTATCTTCTATTATGGCCACTCAGTGTTATGACCCCGAAA
ACTCCGCCTCTCGTTACACATTACTCCCGGATCAACCCGATTCCGGCCACCGGAAGTCCCTTAAAATCATCTCCGGCATT
TTCCTCTCCGTTTTCCTTTTGCTTTCTGTAGCCTTCTTTCCGATCCTCAACAACCAGTCACCGGACTTGCAAATCGACTC
CCGTTCGCCGGCGCCGCCGTCAAGAGGTGTTTCTCAGGGAGTCTCCGATAAAACTTTTCGAGATGTAGCCGGTGCTAGTC
ACGTTTCTTATGCGTGGTCCAATGCTATGCTTAGCTGGCAAAGAACGGCTTACCATTTTCAACCTCAAAAAAATTGGATG
AACGATCCTAATGGACCATTGTATCACAAGGGATGGTACCACCTTTTTTATCAATACAATCCAGATTCAGCTATTTGGGG
AAATATCACATGGGGCCATGCTGTATCCAAGGACTTGATCCACTGGCTCTACTTGCCTTTTGCCATGGTTCCTGATCAAT
GGTATGATATTAACGGTGTCTGGACAGGGTCCGCTACCATCCTACCCGATGGTCAGATCATGATGCTTTATACCGGTGAC
ACTGATGATTATGTGCAAGTGCAAAATCTTGCGTACCCCGCCAACTTATCTGATCCTCTCCTTCTAGACTGGGTCAAGTT
CAAAGGCAACCCGGTTCTGGTTCCTCCACCCGGCATTGGTGTCAAGGACTTTAGAGACCCGACTACTGCTTGGACCGGAC
CACAAAATGGGCAATGGCTGTTAACAATCGGGTCTAAGATTGGTAAAACGGGTGTTGCACTTGTTTATGAAACTTCCAAC
TTCACAAGCTTTAAGCTATTGGATGGAGTGCTGCATGCGGTTCCGGGTACGGGTATGTGGGAGTGTGTGGACTTTTACCC
GGTATCTACTAAAAAAACAAACGGGTTGGACACATCATATAACGGGCCGGGTGTAAAGCATGTGTTAAAAGCAAGTTTAG
ATGACAATAAGCAAGATCATTATGCTATTGGTACGTATGACTTGGGAAAGAACAAATGGACACCCGATAACCCGGAATTG
GATTGTGGAATTGGGTTGAGACTAGACTATGGGAAATATTATGCATCAAAGACTTTTTATGACCCGAAGAAAGAACGAAG
AGTACTGTGGGGATGGATTGGGGAAACTGACAGTGAATCTGCTGACCTGCAGAAGGGATGGGCATCTGTACAGAGTATTC
CAAGGACAGTGCTTTACGACAAGAAGACAGGGACACATCTACTTCAGTGGCCAGTGGAAGAAATTGAAAGCTTAAGAGTG
GGTGATCCTACTGTTAAGCAAGTCGATCTTCAACCAGGCTCAATTGAGCTACTCCGTGTTGACTCAGCTGCAGAGTTGGA
TATAGAAGCCTCATTTGAAGTGGACAAAGTCGCGCTTCAGGGAATAATTGAAGCAGATCATGTAGGTTTCAGTTGCTCTA
CTAGTGGAGGTGCTGCTAGCAGAGGCATTTTGGGACCATTTGGTGTCATAGTAATTGCTGATCAAACGCTATCTGAGCTA
ACGCCAGTTTACTTTTACATTTCTAAAGGAGCTGATGGTCGTGCAGAGACTCACTTCTGTGCTGATCAAACTAGGTTTGC
TTTTCTATCTGGCACAATTAATTTGTCCTTATCCTCTGAGGCTCCGGGAGTTGGTAAACAAGTTTATGGTAGTTCAGTAC
CTGTGTTGGACGGTGAAAAACATTCAATGAGATTATTGGTGGATCACTCAATTGTGGAGAGCTTTGCTCAAGGAGGAAGA
ACAGTCATAACATCGCGAATTTACCCAACAAAGGCAGTAAATGGAGCAGCACGACTCTTTGTTTTCAACAATGCCACAGG
GGCTAGCGTTACTGCCTCCGTCAAGATTTGGTCACTTGAGTCAGCTAATATTCAATCCTTCCCTTTGCAAGACTTGTAA
Sl_3:55282840-55282848:- does not have available information here.