
Microexon ID | Sl_3:55282840-55282848:- |
Species | Solanum Lycopersicum | Coordinates | 3:55282840..55282848 |
Microexon Cluster ID | MEP22 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | Glyco_hydro_32N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | YSKYAMMGRACYGSYTWYCAYTTYCARCCYSMCAARAAYTGGATGAAYGATCCYAAYGGTCCAATGTWYTACAAGGGATKGTACCAYYTSTTCTAYCARTACAAYCCV |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | ATCCTAATG |
Microexon Amino Acid seq | DPNG |
Microexon-tag DNA Seq | TGGCAAAGAACGGCTTACCATTTTCAACCTCAAAAAAATTGGATGAACGATCCTAATGGACCATTGTATCACAAGGGATGGTACCACCTTTTTTATCAATACAATCCA |
Microexon-tag Amino Acid Seq | WQRTAYHFQPQKNWMNDPNGPLYHKGWYHLFYQYNP |
Microexon-tag spanning region | 55281413-55283064 |
Microexon-tag prediction score | 0.9644 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | Solyc03g083910.3.1x |
Reference Transcript ID | Solyc03g083910.3.1 |
Gene ID | Solyc03g083910.3 |
Gene Name | NA |
Transcript ID | Solyc03g083910.3.1 |
Protein ID | |
Gene ID | Solyc03g083910.3 |
Gene Name | |
Pfam domain motif | Glyco_hydro_32N |
Motif E-value | 1.00E-103 |
Motif start | 152 |
Motif end | 471 |
Protein seq | >Solyc03g083910.3.1 NPKCTSNYKSPFVTQFRWSQSFSVFITYIYSSRLVASPIPLSSIMATQCYDPENSASRYTLLPDQPDSGHRKSLKIISGI FLSVFLLLSVAFFPILNNQSPDLQIDSRSPAPPSRGVSQGVSDKTFRDVAGASHVSYAWSNAMLSWQRTAYHFQPQKNWM NDPNGPLYHKGWYHLFYQYNPDSAIWGNITWGHAVSKDLIHWLYLPFAMVPDQWYDINGVWTGSATILPDGQIMMLYTGD TDDYVQVQNLAYPANLSDPLLLDWVKFKGNPVLVPPPGIGVKDFRDPTTAWTGPQNGQWLLTIGSKIGKTGVALVYETSN FTSFKLLDGVLHAVPGTGMWECVDFYPVSTKKTNGLDTSYNGPGVKHVLKASLDDNKQDHYAIGTYDLGKNKWTPDNPEL DCGIGLRLDYGKYYASKTFYDPKKERRVLWGWIGETDSESADLQKGWASVQSIPRTVLYDKKTGTHLLQWPVEEIESLRV GDPTVKQVDLQPGSIELLRVDSAAELDIEASFEVDKVALQGIIEADHVGFSCSTSGGAASRGILGPFGVIVIADQTLSEL TPVYFYISKGADGRAETHFCADQTRFAFLSGTINLSLSSEAPGVGKQVYGSSVPVLDGEKHSMRLLVDHSIVESFAQGGR TVITSRIYPTKAVNGAARLFVFNNATGASVTASVKIWSLESANIQSFPLQDL* |
CDS seq | >Solyc03g083910.3.1 AATCCCAAGTGTACCTCAAATTATAAAAGTCCTTTTGTTACTCAATTTCGTTGGTCCCAGTCATTTTCTGTGTTCATCAC CTATATATATAGCAGTAGACTAGTAGCTTCTCCCATTCCTCTATCTTCTATTATGGCCACTCAGTGTTATGACCCCGAAA ACTCCGCCTCTCGTTACACATTACTCCCGGATCAACCCGATTCCGGCCACCGGAAGTCCCTTAAAATCATCTCCGGCATT TTCCTCTCCGTTTTCCTTTTGCTTTCTGTAGCCTTCTTTCCGATCCTCAACAACCAGTCACCGGACTTGCAAATCGACTC CCGTTCGCCGGCGCCGCCGTCAAGAGGTGTTTCTCAGGGAGTCTCCGATAAAACTTTTCGAGATGTAGCCGGTGCTAGTC ACGTTTCTTATGCGTGGTCCAATGCTATGCTTAGCTGGCAAAGAACGGCTTACCATTTTCAACCTCAAAAAAATTGGATG AACGATCCTAATGGACCATTGTATCACAAGGGATGGTACCACCTTTTTTATCAATACAATCCAGATTCAGCTATTTGGGG AAATATCACATGGGGCCATGCTGTATCCAAGGACTTGATCCACTGGCTCTACTTGCCTTTTGCCATGGTTCCTGATCAAT GGTATGATATTAACGGTGTCTGGACAGGGTCCGCTACCATCCTACCCGATGGTCAGATCATGATGCTTTATACCGGTGAC ACTGATGATTATGTGCAAGTGCAAAATCTTGCGTACCCCGCCAACTTATCTGATCCTCTCCTTCTAGACTGGGTCAAGTT CAAAGGCAACCCGGTTCTGGTTCCTCCACCCGGCATTGGTGTCAAGGACTTTAGAGACCCGACTACTGCTTGGACCGGAC CACAAAATGGGCAATGGCTGTTAACAATCGGGTCTAAGATTGGTAAAACGGGTGTTGCACTTGTTTATGAAACTTCCAAC TTCACAAGCTTTAAGCTATTGGATGGAGTGCTGCATGCGGTTCCGGGTACGGGTATGTGGGAGTGTGTGGACTTTTACCC GGTATCTACTAAAAAAACAAACGGGTTGGACACATCATATAACGGGCCGGGTGTAAAGCATGTGTTAAAAGCAAGTTTAG ATGACAATAAGCAAGATCATTATGCTATTGGTACGTATGACTTGGGAAAGAACAAATGGACACCCGATAACCCGGAATTG GATTGTGGAATTGGGTTGAGACTAGACTATGGGAAATATTATGCATCAAAGACTTTTTATGACCCGAAGAAAGAACGAAG AGTACTGTGGGGATGGATTGGGGAAACTGACAGTGAATCTGCTGACCTGCAGAAGGGATGGGCATCTGTACAGAGTATTC CAAGGACAGTGCTTTACGACAAGAAGACAGGGACACATCTACTTCAGTGGCCAGTGGAAGAAATTGAAAGCTTAAGAGTG GGTGATCCTACTGTTAAGCAAGTCGATCTTCAACCAGGCTCAATTGAGCTACTCCGTGTTGACTCAGCTGCAGAGTTGGA TATAGAAGCCTCATTTGAAGTGGACAAAGTCGCGCTTCAGGGAATAATTGAAGCAGATCATGTAGGTTTCAGTTGCTCTA CTAGTGGAGGTGCTGCTAGCAGAGGCATTTTGGGACCATTTGGTGTCATAGTAATTGCTGATCAAACGCTATCTGAGCTA ACGCCAGTTTACTTTTACATTTCTAAAGGAGCTGATGGTCGTGCAGAGACTCACTTCTGTGCTGATCAAACTAGGTTTGC TTTTCTATCTGGCACAATTAATTTGTCCTTATCCTCTGAGGCTCCGGGAGTTGGTAAACAAGTTTATGGTAGTTCAGTAC CTGTGTTGGACGGTGAAAAACATTCAATGAGATTATTGGTGGATCACTCAATTGTGGAGAGCTTTGCTCAAGGAGGAAGA ACAGTCATAACATCGCGAATTTACCCAACAAAGGCAGTAAATGGAGCAGCACGACTCTTTGTTTTCAACAATGCCACAGG GGCTAGCGTTACTGCCTCCGTCAAGATTTGGTCACTTGAGTCAGCTAATATTCAATCCTTCCCTTTGCAAGACTTGTAA |
Sl_3:55282840-55282848:- does not have available information here.