
Microexon ID | Sb_6:59281659-59281667:- |
Species | Sorghum Bicolor | Coordinates | 6:59281659..59281667 |
Microexon Cluster ID | MEP22 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | Glyco_hydro_32N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | YSKYAMMGRACYGSYTWYCAYTTYCARCCYSMCAARAAYTGGATGAAYGATCCYAAYGGTCCAATGTWYTACAAGGGATKGTACCAYYTSTTCTAYCARTACAAYCCV |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | ATCCAAATG |
Microexon Amino Acid seq | DPNG |
Microexon-tag DNA Seq | CATGGCCGAACAGCGTACCACTTCCAGCCTGCCAAGAACTGGATGAACGATCCAAATGGGCCCGTGTACTACAACGGCATGTACCACCTGTTCTACCAGTACAACCCG |
Microexon-tag Amino Acid Seq | HGRTAYHFQPAKNWMNDPNGPVYYNGMYHLFYQYNP |
Microexon-tag spanning region | 59277577-59281856 |
Microexon-tag prediction score | 0.9712 |
Overlapped with the annotated transcript (%) | 15.34 |
New Transcript ID | EES13037x |
Reference Transcript ID | EES13037 |
Gene ID | SORBI_3006G255400 |
Gene Name | NA |
Transcript ID | EES13040 |
Protein ID | |
Gene ID | SORBI_3006G255500 |
Gene Name | |
Pfam domain motif | Glyco_hydro_32N |
Motif E-value | 1.20E-94 |
Motif start | 15 |
Motif end | 335 |
Protein seq | >EES13040 MNGKQSLRHGRTAYHFQPAKNWMNDPNGPLYHKGMYHLFFQYNPHGPLFGTGKLSWGHSVSGDLVNWAFLGTALDPTSPF DAEGCWSGSTTTLADGRPAILYTGRDANDVQVQNVAFPKNPSDPLLREWHKPSCNPVVPQPADVTRNNFRDPTTAWLGRD GLWRFAVVAEVGGVGSTVVYRSADFVHWERNAAPLHASPDVPVWECPDLFPVAERGTEGLDTSVSAGPGVRHVLKLSKAA DEDYYVVGRYDDETDTFAPVDDGDHDVRNWRRIDHGHLFGAKTFFDARKKRRVLWAWVDETDSRSDDVGKDWTGIQTFPR ALWLDADGKQLVQWPVEEIETLRRERVALVGAEIGSGGLHEIAGVDALQADVEVVFDLPSLEDAEELDPKWLQDPQKLCV YAEKKDASSPGPGGVGPFGLVVMASGDMREQTTVFFRVFRHGGTYKVLMCADLTRSSTKEGVHKPVYAGFVDVDVEKDRS ISLRTLIDHSVIESFGGGGRTCITARVYPEHVVAGGSSHLYLFNNGAHPVTVSKLEAWELGTASVNVEEDYRVGTL* |
CDS seq | >EES13040 ATGAACGGGAAGCAGAGCCTACGCCATGGCCGAACAGCGTACCACTTCCAGCCTGCCAAGAACTGGATGAACGATCCAAA TGGGCCTTTGTACCACAAGGGCATGTACCACCTGTTCTTCCAGTACAACCCGCACGGCCCACTGTTCGGCACCGGTAAGC TCTCCTGGGGCCACTCCGTCTCCGGCGACCTCGTGAACTGGGCCTTCCTGGGCACAGCGCTGGACCCGACGTCGCCGTTC GACGCCGAGGGCTGCTGGTCGGGTTCCACCACCACGCTCGCCGATGGCCGCCCGGCCATCCTCTACACCGGGCGCGACGC CAACGACGTGCAGGTGCAGAACGTGGCGTTCCCCAAGAACCCGTCGGACCCGCTCCTCCGGGAGTGGCACAAGCCCAGCT GCAACCCGGTCGTCCCGCAGCCCGCCGACGTGACGCGCAACAACTTCCGGGACCCCACCACGGCGTGGCTGGGCCGCGAC GGGCTCTGGCGGTTCGCCGTCGTGGCCGAGGTCGGCGGCGTCGGCTCCACCGTGGTGTACCGCAGCGCGGACTTCGTCCA CTGGGAGCGGAACGCCGCGCCGCTGCACGCGTCCCCCGACGTGCCTGTCTGGGAGTGCCCCGACCTGTTCCCGGTGGCAG AGCGCGGCACGGAGGGGCTCGACACGTCGGTGAGCGCCGGGCCCGGGGTGAGGCACGTCCTCAAGCTCAGCAAGGCCGCC GACGAGGACTACTACGTGGTCGGCCGGTACGACGATGAGACCGACACGTTCGCGCCGGTGGACGACGGCGACCACGACGT CCGGAACTGGCGCCGGATCGACCACGGCCACCTGTTCGGGGCCAAGACGTTCTTCGACGCGCGGAAGAAGCGGCGCGTGC TGTGGGCGTGGGTGGACGAGACGGACAGCCGCTCCGACGACGTCGGCAAGGACTGGACGGGCATCCAGACGTTCCCGAGG GCGCTGTGGCTGGACGCCGACGGGAAGCAGCTGGTGCAGTGGCCGGTGGAGGAGATCGAGACGCTGCGGAGGGAGCGAGT CGCGCTGGTTGGGGCGGAGATCGGCTCCGGCGGCCTTCACGAGATCGCCGGCGTCGATGCCCTGCAGGCGGACGTGGAGG TCGTGTTCGACCTCCCGAGCCTGGAGGACGCCGAGGAGCTGGACCCCAAGTGGCTGCAAGATCCCCAGAAGCTGTGTGTG TATGCGGAGAAGAAGGACGCTTCCTCACCGGGCCCTGGCGGCGTCGGGCCGTTCGGGCTCGTCGTGATGGCGTCCGGCGA CATGCGGGAGCAGACCACCGTGTTCTTCAGGGTGTTCAGGCACGGTGGCACGTACAAGGTCCTCATGTGCGCCGACCTGA CAAGGTCATCGACAAAAGAGGGGGTGCACAAGCCAGTCTACGCAGGATTTGTTGACGTGGACGTGGAGAAGGACAGGAGC ATATCGCTAAGAACACTGATTGACCACTCTGTCATCGAGAGCTTCGGAGGCGGGGGCCGGACGTGCATCACGGCCCGAGT GTACCCTGAGCACGTGGTAGCAGGAGGCAGTAGCCACCTGTACCTGTTCAACAACGGAGCTCACCCAGTGACTGTGTCCA AGCTGGAGGCCTGGGAGCTAGGGACGGCAAGCGTCAACGTTGAAGAAGACTACCGTGTGGGCACACTGTAA |
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