Microexon ID Sb_6:59281659-59281667:-
Species Sorghum   Bicolor
Coordinates 6:59281659..59281667
Microexon Cluster ID MEP22
Size 9
Phase 1
Pfam Domain Motif Glyco_hydro_32N
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 49,9,50
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq YSKYAMMGRACYGSYTWYCAYTTYCARCCYSMCAARAAYTGGATGAAYGATCCYAAYGGTCCAATGTWYTACAAGGGATKGTACCAYYTSTTCTAYCARTACAAYCCV
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq ATCCAAATG
Microexon Amino Acid seq DPNG
Microexon-tag DNA Seq CATGGCCGAACAGCGTACCACTTCCAGCCTGCCAAGAACTGGATGAACGATCCAAATGGGCCCGTGTACTACAACGGCATGTACCACCTGTTCTACCAGTACAACCCG
Microexon-tag Amino Acid Seq HGRTAYHFQPAKNWMNDPNGPVYYNGMYHLFYQYNP
Microexon-tag spanning region59277577-59281856
Microexon-tag prediction score0.9712
Overlapped with the annotated transcript (%) 15.34
New Transcript ID EES13037x
Reference Transcript ID EES13037
Gene ID SORBI_3006G255400
Gene Name NA
Transcript ID EES13040
Protein ID
Gene ID SORBI_3006G255500
Gene Name
Pfam domain motif Glyco_hydro_32N
Motif E-value 1.20E-94
Motif start 15
Motif end 335
Protein seq >EES13040
MNGKQSLRHGRTAYHFQPAKNWMNDPNGPLYHKGMYHLFFQYNPHGPLFGTGKLSWGHSVSGDLVNWAFLGTALDPTSPF
DAEGCWSGSTTTLADGRPAILYTGRDANDVQVQNVAFPKNPSDPLLREWHKPSCNPVVPQPADVTRNNFRDPTTAWLGRD
GLWRFAVVAEVGGVGSTVVYRSADFVHWERNAAPLHASPDVPVWECPDLFPVAERGTEGLDTSVSAGPGVRHVLKLSKAA
DEDYYVVGRYDDETDTFAPVDDGDHDVRNWRRIDHGHLFGAKTFFDARKKRRVLWAWVDETDSRSDDVGKDWTGIQTFPR
ALWLDADGKQLVQWPVEEIETLRRERVALVGAEIGSGGLHEIAGVDALQADVEVVFDLPSLEDAEELDPKWLQDPQKLCV
YAEKKDASSPGPGGVGPFGLVVMASGDMREQTTVFFRVFRHGGTYKVLMCADLTRSSTKEGVHKPVYAGFVDVDVEKDRS
ISLRTLIDHSVIESFGGGGRTCITARVYPEHVVAGGSSHLYLFNNGAHPVTVSKLEAWELGTASVNVEEDYRVGTL*
CDS seq >EES13040
ATGAACGGGAAGCAGAGCCTACGCCATGGCCGAACAGCGTACCACTTCCAGCCTGCCAAGAACTGGATGAACGATCCAAA
TGGGCCTTTGTACCACAAGGGCATGTACCACCTGTTCTTCCAGTACAACCCGCACGGCCCACTGTTCGGCACCGGTAAGC
TCTCCTGGGGCCACTCCGTCTCCGGCGACCTCGTGAACTGGGCCTTCCTGGGCACAGCGCTGGACCCGACGTCGCCGTTC
GACGCCGAGGGCTGCTGGTCGGGTTCCACCACCACGCTCGCCGATGGCCGCCCGGCCATCCTCTACACCGGGCGCGACGC
CAACGACGTGCAGGTGCAGAACGTGGCGTTCCCCAAGAACCCGTCGGACCCGCTCCTCCGGGAGTGGCACAAGCCCAGCT
GCAACCCGGTCGTCCCGCAGCCCGCCGACGTGACGCGCAACAACTTCCGGGACCCCACCACGGCGTGGCTGGGCCGCGAC
GGGCTCTGGCGGTTCGCCGTCGTGGCCGAGGTCGGCGGCGTCGGCTCCACCGTGGTGTACCGCAGCGCGGACTTCGTCCA
CTGGGAGCGGAACGCCGCGCCGCTGCACGCGTCCCCCGACGTGCCTGTCTGGGAGTGCCCCGACCTGTTCCCGGTGGCAG
AGCGCGGCACGGAGGGGCTCGACACGTCGGTGAGCGCCGGGCCCGGGGTGAGGCACGTCCTCAAGCTCAGCAAGGCCGCC
GACGAGGACTACTACGTGGTCGGCCGGTACGACGATGAGACCGACACGTTCGCGCCGGTGGACGACGGCGACCACGACGT
CCGGAACTGGCGCCGGATCGACCACGGCCACCTGTTCGGGGCCAAGACGTTCTTCGACGCGCGGAAGAAGCGGCGCGTGC
TGTGGGCGTGGGTGGACGAGACGGACAGCCGCTCCGACGACGTCGGCAAGGACTGGACGGGCATCCAGACGTTCCCGAGG
GCGCTGTGGCTGGACGCCGACGGGAAGCAGCTGGTGCAGTGGCCGGTGGAGGAGATCGAGACGCTGCGGAGGGAGCGAGT
CGCGCTGGTTGGGGCGGAGATCGGCTCCGGCGGCCTTCACGAGATCGCCGGCGTCGATGCCCTGCAGGCGGACGTGGAGG
TCGTGTTCGACCTCCCGAGCCTGGAGGACGCCGAGGAGCTGGACCCCAAGTGGCTGCAAGATCCCCAGAAGCTGTGTGTG
TATGCGGAGAAGAAGGACGCTTCCTCACCGGGCCCTGGCGGCGTCGGGCCGTTCGGGCTCGTCGTGATGGCGTCCGGCGA
CATGCGGGAGCAGACCACCGTGTTCTTCAGGGTGTTCAGGCACGGTGGCACGTACAAGGTCCTCATGTGCGCCGACCTGA
CAAGGTCATCGACAAAAGAGGGGGTGCACAAGCCAGTCTACGCAGGATTTGTTGACGTGGACGTGGAGAAGGACAGGAGC
ATATCGCTAAGAACACTGATTGACCACTCTGTCATCGAGAGCTTCGGAGGCGGGGGCCGGACGTGCATCACGGCCCGAGT
GTACCCTGAGCACGTGGTAGCAGGAGGCAGTAGCCACCTGTACCTGTTCAACAACGGAGCTCACCCAGTGACTGTGTCCA
AGCTGGAGGCCTGGGAGCTAGGGACGGCAAGCGTCAACGTTGAAGAAGACTACCGTGTGGGCACACTGTAA
Sb_6:59281659-59281667:- does not have available information here.