
Microexon ID | Sb_6:51858478-51858486:+ |
Species | Sorghum Bicolor | Coordinates | 6:51858478..51858486 |
Microexon Cluster ID | MEP22 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | Glyco_hydro_32N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | YSKYAMMGRACYGSYTWYCAYTTYCARCCYSMCAARAAYTGGATGAAYGATCCYAAYGGTCCAATGTWYTACAAGGGATKGTACCAYYTSTTCTAYCARTACAAYCCV |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | ATCCGAACG |
Microexon Amino Acid seq | DPNG |
Microexon-tag DNA Seq | TGGCAGCGCACGGCGTTCCATTTCCAGCCCCCCAAGAACTGGATGAACGATCCGAACGGTCCTCTGTACCACAAGGGCTGGTACCACCTGTTCTACCAGTGGAACCCG |
Microexon-tag Amino Acid Seq | WQRTAFHFQPPKNWMNDPNGPLYHKGWYHLFYQWNP |
Microexon-tag spanning region | 51858277-51858770 |
Microexon-tag prediction score | 0.972 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | OQU82024x |
Reference Transcript ID | OQU82024 |
Gene ID | SORBI_3006G160700 |
Gene Name | NA |
Transcript ID | OQU82024 |
Protein ID | |
Gene ID | SORBI_3006G160700 |
Gene Name | |
Pfam domain motif | Glyco_hydro_32N |
Motif E-value | 1.50E-101 |
Motif start | 10 |
Motif end | 338 |
Protein seq | >OQU82024 MLAWQRTAFHFQPPKNWMNDPNGPLYHKGWYHLFYQWNPDSAVWGNITWGHAVSRDLLHWLHLPLAMVPDHPYDANGVWS GSATRLPDGRIVMLYTGSTAESVQVQNLAEPADASDPLLREWVKSDANPVLVPPPGIGATDFRDPTTAWRAANDDTNSKQ AWRVAIGSKDRDHAGLALVYRTEDFVRYDPVPALMHVVPGTGMWECVDFYPVAVAANNGDGLETSVPPGPGVKHVVKASL DDDKHDYYAIGTYDPATDTWTPDDAENDVGIGLRYDYGKYYASKTFYDPVLRRRVLWGWVGETDSERADILKGWASVQSI PRTVLLDTKTGSNLLQWPVVEVENLRMSGKRFDDVALHRGSVVPLDVGKATQLDIEAVFEVDAAAVEGVTEADVTFNCST SAGAAGRGLLGPFGLLVLADEDLSEQTAVYFYLVKGTDGSLQTFFCQDELRASKANDLVKRVYGSLVPVLDGENLSVRIL VDHSIVESFAQGGRTCITSRVYPTRAIYDSARVFLFNNATDVHVKAKSVKIWQLNSAYIRPYEASSL* |
CDS seq | >OQU82024 ATGCTGGCGTGGCAGCGCACGGCGTTCCATTTCCAGCCCCCCAAGAACTGGATGAACGATCCGAACGGTCCTCTGTACCA CAAGGGCTGGTACCACCTGTTCTACCAGTGGAACCCGGACTCGGCGGTGTGGGGCAACATCACCTGGGGCCACGCCGTGT CGCGCGACCTCCTCCACTGGCTGCACCTACCGCTGGCCATGGTGCCGGATCACCCGTACGACGCCAACGGCGTCTGGTCG GGATCCGCCACGCGGCTCCCGGACGGCCGGATCGTCATGCTCTACACGGGCTCCACGGCGGAGTCGGTGCAGGTGCAGAA CCTCGCGGAGCCCGCCGACGCGTCGGACCCGCTGCTGCGGGAGTGGGTCAAGTCGGACGCCAACCCGGTGCTGGTGCCGC CGCCGGGCATCGGGGCGACGGACTTCCGCGACCCGACGACGGCGTGGCGGGCGGCCAACGACGACACGAATTCGAAGCAG GCGTGGCGGGTCGCCATCGGGTCCAAGGACCGGGACCACGCCGGCCTGGCGCTGGTGTACCGGACGGAGGACTTCGTGCG GTACGACCCGGTGCCGGCGCTGATGCACGTCGTCCCCGGCACCGGCATGTGGGAGTGCGTCGACTTCTACCCGGTGGCCG TGGCGGCCAACAACGGGGACGGGCTGGAGACGTCCGTGCCGCCGGGGCCCGGCGTGAAGCACGTGGTCAAGGCCAGCCTC GACGACGACAAGCACGACTACTACGCCATCGGCACCTACGACCCGGCGACGGACACGTGGACGCCCGACGACGCGGAGAA CGACGTCGGGATCGGACTCCGGTACGACTACGGCAAGTACTACGCGTCCAAGACCTTCTACGACCCCGTGCTTCGCCGGC GGGTGCTCTGGGGGTGGGTCGGCGAGACCGACAGCGAGCGCGCTGACATCCTCAAGGGCTGGGCATCCGTGCAGTCAATC CCCAGGACGGTCCTCCTGGACACGAAGACGGGCAGCAACCTTCTCCAGTGGCCGGTGGTGGAGGTGGAGAACCTCCGGAT GAGCGGCAAGCGCTTCGACGACGTCGCGCTGCACCGCGGATCGGTCGTGCCCCTCGACGTCGGCAAGGCGACACAGTTGG ACATCGAGGCCGTGTTCGAGGTGGACGCGGCGGCCGTGGAGGGCGTGACGGAGGCCGACGTGACGTTCAACTGCAGCACC AGCGCCGGCGCGGCGGGGCGGGGCCTGCTCGGCCCGTTCGGCCTTCTCGTGCTGGCGGACGAGGACTTGTCCGAGCAGAC CGCCGTGTACTTCTACCTGGTCAAGGGCACGGACGGCAGCCTCCAAACGTTCTTCTGCCAAGACGAGCTCAGGGCATCCA AGGCGAACGATCTGGTTAAGAGAGTATACGGAAGCTTGGTCCCTGTGCTAGATGGGGAGAATCTTTCAGTCAGAATACTG GTTGACCACTCCATCGTGGAGAGCTTTGCTCAAGGCGGAAGGACGTGCATCACGTCGCGCGTGTACCCTACACGAGCCAT CTACGACTCCGCCCGCGTGTTCCTCTTCAACAACGCCACAGATGTGCACGTCAAAGCAAAATCCGTCAAGATCTGGCAGC TCAACTCCGCCTACATCCGGCCGTATGAAGCGAGTTCTCTATGA |
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