Microexon ID Sb_6:43323214-43323222:-
Species Sorghum   Bicolor
Coordinates 6:43323214..43323222
Microexon Cluster ID MEP22
Size 9
Phase 1
Pfam Domain Motif Glyco_hydro_32N
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 49,9,50
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq YSKYAMMGRACYGSYTWYCAYTTYCARCCYSMCAARAAYTGGATGAAYGATCCYAAYGGTCCAATGTWYTACAAGGGATKGTACCAYYTSTTCTAYCARTACAAYCCV
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq ATCCCAACG
Microexon Amino Acid seq DPNA
Microexon-tag DNA Seq CTGCTGAGGACAGGGTACCATTTCCAGCCTCGCAAGAACTGGATCAATGATCCCAACGCTCCATTGTACTACAAGGGGTGGTACCACATCTTCTACCAATACAACCCC
Microexon-tag Amino Acid Seq MLRTGYHFQPRKNWINDPNAPLYYKGWYHIFYQYNP
Microexon-tag spanning region43322689-43323930
Microexon-tag prediction score0.9674
Overlapped with the annotated transcript (%) 100
New Transcript ID EES10748x
Reference Transcript ID EES10748
Gene ID SORBI_3006G070564
Gene Name NA
Transcript ID EES10748
Protein ID
Gene ID SORBI_3006G070564
Gene Name
Pfam domain motif Glyco_hydro_32N
Motif E-value 8.40E-102
Motif start 54
Motif end 384
Protein seq >EES10748
MRVVGMVAWACIWLLLLQLAGASHVVYDENLEVEAAAAAVPPSIVDPLLRTGYHFQPRKNWINDPNAPLYYKGWYHIFYQ
YNPKGAVWGNIVWGHSVSRDLINWVALKPAIEPSIPSDKYGCWSGSATTLPDGTPAIMYTGVNRPDVNYQVQNIAYPRNK
SDPLLREWVKPSHNPIIVPKAGVNATQFRDPTTAWRHADGGGHWRLLIGSLEGAARGVAYVYRSRDFKRWTRVRRPLHSA
ATGMWECPDFYPLSTAGRRMGVETSSSSAAAAGSRRRQANKYVLKNSLDLRRYDYYTIGTYDPAAERYVPDDPAGDERHL
RYDYGNFYASKTFYDPAKRRRILWGWANESDTAADDVAKGWAGIQAIPRTVWLDPSGKQLLQWPIEEVEALRGKSVTLKN
RVIKPGQHVEVTGIQTAQADVEVSFEVPSLAGAEALDDPALAGDAQRLCGARGAAVEGGVGPFGLWVLASANREERTAVF
FRVFRPARGGGKPVVLMCTDPCKSSLDPNLYQPTFAGFVDTDISNGKISLRSLIDRSVVESFGAGGKTCILSRVYPSLAI
GKNARLYVFNNGKADVKVSSLTAWEMKKPLMNGA*
CDS seq >EES10748
ATGAGGGTGGTTGGAATGGTTGCTTGGGCATGCATATGGCTGCTGCTCCTGCAGCTCGCCGGGGCTTCTCATGTCGTCTA
CGATGAGAACCTCGAGGTGGAGGCGGCGGCAGCCGCCGTGCCGCCCTCCATTGTCGACCCCCTGCTGAGGACAGGGTACC
ATTTCCAGCCTCGCAAGAACTGGATCAATGATCCCAACGCTCCATTGTACTACAAGGGGTGGTACCACATCTTCTACCAA
TACAACCCCAAAGGCGCCGTGTGGGGCAACATCGTGTGGGGCCACTCGGTGTCGCGAGACCTCATCAACTGGGTGGCCCT
GAAGCCGGCGATCGAGCCCAGCATCCCGTCCGACAAGTACGGCTGCTGGTCAGGGTCGGCGACCACGCTCCCCGACGGCA
CGCCGGCGATCATGTACACGGGCGTGAACCGTCCCGACGTGAACTACCAGGTGCAGAACATCGCGTACCCTCGGAACAAG
TCGGACCCGCTGCTCCGGGAGTGGGTGAAGCCCTCGCACAACCCGATCATCGTCCCCAAGGCCGGCGTCAACGCGACGCA
GTTCCGGGACCCCACCACGGCGTGGCGCCACGCCGACGGCGGCGGCCACTGGCGGCTGCTCATCGGCAGCCTGGAGGGCG
CCGCCCGCGGCGTGGCGTACGTGTACCGGAGCCGCGACTTCAAGCGGTGGACGCGGGTCCGGCGGCCGCTGCACTCGGCG
GCCACGGGGATGTGGGAGTGCCCGGACTTCTACCCGCTCAGCACGGCCGGCCGGCGCATGGGTGTCGAGACGTCGTCGTC
GTCGGCGGCGGCGGCGGGCTCTCGCCGTCGTCAGGCGAACAAGTACGTGCTGAAGAACAGCCTGGACCTGCGGCGGTACG
ACTACTACACCATCGGCACGTACGACCCGGCGGCGGAGCGGTACGTGCCGGACGACCCCGCCGGCGACGAGCGCCACCTG
CGGTACGACTACGGCAACTTCTACGCGTCCAAGACGTTCTACGACCCGGCGAAGCGGCGGCGGATCCTGTGGGGCTGGGC
CAACGAGTCCGACACCGCCGCCGACGACGTCGCCAAAGGGTGGGCTGGGATTCAGGCGATTCCGAGGACGGTGTGGCTGG
ATCCCAGCGGGAAGCAGCTGCTGCAGTGGCCTATCGAGGAAGTGGAGGCGCTCAGAGGCAAGTCGGTCACTCTCAAGAAC
AGGGTGATCAAGCCAGGACAGCACGTCGAGGTGACCGGGATACAAACGGCACAGGCTGACGTGGAGGTGAGCTTCGAGGT
GCCGAGCCTGGCGGGAGCGGAGGCGCTGGACGACCCGGCGCTCGCCGGCGACGCGCAGCGGCTGTGCGGCGCCAGGGGCG
CCGCCGTGGAGGGCGGCGTCGGACCGTTCGGGCTCTGGGTGCTGGCCTCCGCCAACCGGGAGGAGAGGACCGCCGTGTTC
TTCAGGGTGTTCAGGCCCGCGCGCGGCGGCGGCAAGCCGGTGGTGCTCATGTGCACCGACCCCTGCAAGTCATCTCTGGA
CCCGAACCTGTACCAGCCGACGTTTGCAGGTTTTGTGGACACAGACATTTCTAACGGCAAGATCTCTCTGAGAAGCCTGA
TCGACCGGTCGGTTGTTGAGAGCTTTGGAGCCGGGGGCAAGACGTGCATCCTCTCCAGGGTCTACCCGTCGCTCGCCATC
GGCAAGAACGCCCGCCTCTACGTGTTCAACAACGGGAAGGCGGACGTCAAGGTGTCCAGTCTCACCGCATGGGAGATGAA
GAAGCCACTCATGAATGGAGCTTGA
Sb_6:43323214-43323222:- does not have available information here.