
Microexon ID | Sb_6:43323214-43323222:- |
Species | Sorghum Bicolor | Coordinates | 6:43323214..43323222 |
Microexon Cluster ID | MEP22 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | Glyco_hydro_32N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | YSKYAMMGRACYGSYTWYCAYTTYCARCCYSMCAARAAYTGGATGAAYGATCCYAAYGGTCCAATGTWYTACAAGGGATKGTACCAYYTSTTCTAYCARTACAAYCCV |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | ATCCCAACG |
Microexon Amino Acid seq | DPNA |
Microexon-tag DNA Seq | CTGCTGAGGACAGGGTACCATTTCCAGCCTCGCAAGAACTGGATCAATGATCCCAACGCTCCATTGTACTACAAGGGGTGGTACCACATCTTCTACCAATACAACCCC |
Microexon-tag Amino Acid Seq | MLRTGYHFQPRKNWINDPNAPLYYKGWYHIFYQYNP |
Microexon-tag spanning region | 43322689-43323930 |
Microexon-tag prediction score | 0.9674 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | EES10748x |
Reference Transcript ID | EES10748 |
Gene ID | SORBI_3006G070564 |
Gene Name | NA |
Transcript ID | EES10748 |
Protein ID | |
Gene ID | SORBI_3006G070564 |
Gene Name | |
Pfam domain motif | Glyco_hydro_32N |
Motif E-value | 8.40E-102 |
Motif start | 54 |
Motif end | 384 |
Protein seq | >EES10748 MRVVGMVAWACIWLLLLQLAGASHVVYDENLEVEAAAAAVPPSIVDPLLRTGYHFQPRKNWINDPNAPLYYKGWYHIFYQ YNPKGAVWGNIVWGHSVSRDLINWVALKPAIEPSIPSDKYGCWSGSATTLPDGTPAIMYTGVNRPDVNYQVQNIAYPRNK SDPLLREWVKPSHNPIIVPKAGVNATQFRDPTTAWRHADGGGHWRLLIGSLEGAARGVAYVYRSRDFKRWTRVRRPLHSA ATGMWECPDFYPLSTAGRRMGVETSSSSAAAAGSRRRQANKYVLKNSLDLRRYDYYTIGTYDPAAERYVPDDPAGDERHL RYDYGNFYASKTFYDPAKRRRILWGWANESDTAADDVAKGWAGIQAIPRTVWLDPSGKQLLQWPIEEVEALRGKSVTLKN RVIKPGQHVEVTGIQTAQADVEVSFEVPSLAGAEALDDPALAGDAQRLCGARGAAVEGGVGPFGLWVLASANREERTAVF FRVFRPARGGGKPVVLMCTDPCKSSLDPNLYQPTFAGFVDTDISNGKISLRSLIDRSVVESFGAGGKTCILSRVYPSLAI GKNARLYVFNNGKADVKVSSLTAWEMKKPLMNGA* |
CDS seq | >EES10748 ATGAGGGTGGTTGGAATGGTTGCTTGGGCATGCATATGGCTGCTGCTCCTGCAGCTCGCCGGGGCTTCTCATGTCGTCTA CGATGAGAACCTCGAGGTGGAGGCGGCGGCAGCCGCCGTGCCGCCCTCCATTGTCGACCCCCTGCTGAGGACAGGGTACC ATTTCCAGCCTCGCAAGAACTGGATCAATGATCCCAACGCTCCATTGTACTACAAGGGGTGGTACCACATCTTCTACCAA TACAACCCCAAAGGCGCCGTGTGGGGCAACATCGTGTGGGGCCACTCGGTGTCGCGAGACCTCATCAACTGGGTGGCCCT GAAGCCGGCGATCGAGCCCAGCATCCCGTCCGACAAGTACGGCTGCTGGTCAGGGTCGGCGACCACGCTCCCCGACGGCA CGCCGGCGATCATGTACACGGGCGTGAACCGTCCCGACGTGAACTACCAGGTGCAGAACATCGCGTACCCTCGGAACAAG TCGGACCCGCTGCTCCGGGAGTGGGTGAAGCCCTCGCACAACCCGATCATCGTCCCCAAGGCCGGCGTCAACGCGACGCA GTTCCGGGACCCCACCACGGCGTGGCGCCACGCCGACGGCGGCGGCCACTGGCGGCTGCTCATCGGCAGCCTGGAGGGCG CCGCCCGCGGCGTGGCGTACGTGTACCGGAGCCGCGACTTCAAGCGGTGGACGCGGGTCCGGCGGCCGCTGCACTCGGCG GCCACGGGGATGTGGGAGTGCCCGGACTTCTACCCGCTCAGCACGGCCGGCCGGCGCATGGGTGTCGAGACGTCGTCGTC GTCGGCGGCGGCGGCGGGCTCTCGCCGTCGTCAGGCGAACAAGTACGTGCTGAAGAACAGCCTGGACCTGCGGCGGTACG ACTACTACACCATCGGCACGTACGACCCGGCGGCGGAGCGGTACGTGCCGGACGACCCCGCCGGCGACGAGCGCCACCTG CGGTACGACTACGGCAACTTCTACGCGTCCAAGACGTTCTACGACCCGGCGAAGCGGCGGCGGATCCTGTGGGGCTGGGC CAACGAGTCCGACACCGCCGCCGACGACGTCGCCAAAGGGTGGGCTGGGATTCAGGCGATTCCGAGGACGGTGTGGCTGG ATCCCAGCGGGAAGCAGCTGCTGCAGTGGCCTATCGAGGAAGTGGAGGCGCTCAGAGGCAAGTCGGTCACTCTCAAGAAC AGGGTGATCAAGCCAGGACAGCACGTCGAGGTGACCGGGATACAAACGGCACAGGCTGACGTGGAGGTGAGCTTCGAGGT GCCGAGCCTGGCGGGAGCGGAGGCGCTGGACGACCCGGCGCTCGCCGGCGACGCGCAGCGGCTGTGCGGCGCCAGGGGCG CCGCCGTGGAGGGCGGCGTCGGACCGTTCGGGCTCTGGGTGCTGGCCTCCGCCAACCGGGAGGAGAGGACCGCCGTGTTC TTCAGGGTGTTCAGGCCCGCGCGCGGCGGCGGCAAGCCGGTGGTGCTCATGTGCACCGACCCCTGCAAGTCATCTCTGGA CCCGAACCTGTACCAGCCGACGTTTGCAGGTTTTGTGGACACAGACATTTCTAACGGCAAGATCTCTCTGAGAAGCCTGA TCGACCGGTCGGTTGTTGAGAGCTTTGGAGCCGGGGGCAAGACGTGCATCCTCTCCAGGGTCTACCCGTCGCTCGCCATC GGCAAGAACGCCCGCCTCTACGTGTTCAACAACGGGAAGGCGGACGTCAAGGTGTCCAGTCTCACCGCATGGGAGATGAA GAAGCCACTCATGAATGGAGCTTGA |
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