Microexon ID Sb_6:43307300-43307308:-
Species Sorghum   Bicolor
Coordinates 6:43307300..43307308
Microexon Cluster ID MEP22
Size 9
Phase 1
Pfam Domain Motif Glyco_hydro_32N
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 49,9,50
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq YSKYAMMGRACYGSYTWYCAYTTYCARCCYSMCAARAAYTGGATGAAYGATCCYAAYGGTCCAATGTWYTACAAGGGATKGTACCAYYTSTTCTAYCARTACAAYCCV
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq ATCCCAACG
Microexon Amino Acid seq DPNA
Microexon-tag DNA Seq CTGCTGAGAACCGGCTACCACTTCCAGCCTCCCAAGAACTGGATCAATGATCCCAACGCTCCGTTCTACTACAAGGGGTGGTACCATTTCTTCTACCAGTACAACCCC
Microexon-tag Amino Acid Seq MLRTGYHFQPPKNWINDPNAPFYYKGWYHFFYQYNP
Microexon-tag spanning region43306799-43307975
Microexon-tag prediction score0.9708
Overlapped with the annotated transcript (%) 100
New Transcript ID OQU81520x
Reference Transcript ID OQU81520
Gene ID SORBI_3006G070298
Gene Name NA
Transcript ID OQU81520
Protein ID
Gene ID SORBI_3006G070298
Gene Name
Pfam domain motif Glyco_hydro_32N
Motif E-value 4.70E-100
Motif start 60
Motif end 398
Protein seq >OQU81520
MRALAGARLLAWSWLAVLLLPVVVQLAGASHVVYEEEKLAVEAAAVPPSIVHPLLRTGYHFQPPKNWINDPNAPFYYKGW
YHFFYQYNPKGAVWGNIVWAHSVSRDLINWMALEPAIKPSIPSDKYGCWSGSATTMPDGTPVIMYTGIDRPNTNYQVQNV
AYPRNKSDPLLREWVKPSYNPVIVPEGGINATQFRDPTTAWRATAGGDGHWRLLIGSVRTTTTTGATAPPRGVAYVYRSR
DFRRWTRVRRPLHSAATGMWECPDFYPVSSDEDGRRRRVGLETSVPSGARVKHVLKNSLDLRRYDYYTVGTYDRDAERYV
PDDPAGDDDGERRLRYDYGNFYASKTFYDPAKRRRILWGWANESDTAADDVAKGWAGIQAIPRTVWLDPSGKQLLQWPVE
EVEALRGKAVTLKNRVIKPGQHVEVTGIQTAQADVEVSFEVSPSALAGAERLDPALADDAERLCGVKRADVKGGVGPFGL
WVLASANLKERTAVFFRVFKAAAGSSNNKPVVLMCTDPTKSSLNPNLYRPTFAGFVDTDISNGKISLRSLIDRSVVESFG
AGGKTCILSRVYPSLAIGNNARLYVFNNGKADVRVSRLTAWEMKKPLMNGA*
CDS seq >OQU81520
ATGAGAGCGCTAGCAGGAGCAAGGCTTCTTGCTTGGTCATGGCTGGCGGTACTGCTGCTGCCGGTGGTGGTGCAGCTGGC
TGGAGCCTCCCATGTCGTCTACGAGGAAGAGAAGCTCGCGGTGGAGGCGGCGGCGGTGCCGCCGTCCATCGTCCACCCGC
TGCTGAGAACCGGCTACCACTTCCAGCCTCCCAAGAACTGGATCAATGATCCCAACGCTCCGTTCTACTACAAGGGGTGG
TACCATTTCTTCTACCAGTACAACCCCAAAGGCGCTGTATGGGGCAACATCGTATGGGCGCACTCGGTCTCACGCGACCT
CATCAACTGGATGGCATTAGAGCCGGCGATCAAGCCCAGCATCCCCTCCGACAAGTACGGCTGCTGGTCGGGCTCGGCGA
CGACCATGCCCGACGGCACGCCGGTGATCATGTACACCGGCATCGACCGCCCCAACACCAACTACCAGGTCCAGAACGTC
GCCTACCCTCGGAACAAGTCCGACCCGCTGCTCCGGGAGTGGGTGAAGCCGTCCTACAACCCGGTCATCGTGCCGGAAGG
CGGCATCAACGCGACGCAGTTCCGCGACCCGACCACGGCCTGGCGCGCCACCGCCGGCGGCGACGGCCACTGGCGGCTGC
TCATCGGCAGCGTGAGGACGACGACGACGACGGGGGCCACGGCGCCGCCCCGGGGCGTGGCGTATGTGTACCGGAGCCGC
GACTTCAGGCGGTGGACGCGGGTCCGGCGGCCGCTGCACTCGGCGGCGACGGGGATGTGGGAGTGCCCGGACTTCTACCC
GGTGAGCAGCGACGAGGACGGCCGCCGCCGGCGCGTGGGGCTCGAGACGTCCGTGCCGTCGGGCGCAAGGGTGAAGCACG
TGCTCAAGAACAGCCTCGACCTGCGGCGGTACGACTACTACACCGTCGGCACGTACGACCGGGACGCCGAGCGGTACGTG
CCGGACGACCCCGCCGGCGACGACGACGGCGAGCGCCGCCTGCGGTACGACTACGGCAACTTCTACGCGTCCAAGACGTT
CTACGACCCGGCGAAGCGGCGGCGGATCCTGTGGGGCTGGGCCAACGAGTCCGACACCGCCGCCGACGATGTCGCCAAAG
GGTGGGCCGGGATTCAGGCGATTCCGAGGACGGTGTGGCTGGACCCCAGCGGGAAGCAGCTGCTGCAGTGGCCCGTCGAG
GAGGTAGAGGCGCTCAGAGGCAAGGCGGTCACTCTCAAGAACAGGGTAATCAAGCCAGGACAGCACGTCGAGGTGACCGG
GATACAAACAGCACAGGCTGACGTGGAGGTGAGCTTCGAGGTGTCGCCGTCGGCCCTGGCGGGAGCGGAGCGGCTGGACC
CGGCGCTCGCCGACGACGCCGAGAGGCTGTGCGGCGTCAAGCGCGCCGACGTGAAGGGCGGCGTGGGTCCGTTCGGGCTG
TGGGTGCTGGCCTCCGCCAACCTCAAGGAGAGAACCGCGGTGTTCTTCAGGGTGTTCAAGGCCGCCGCCGGCAGCAGCAA
CAACAAGCCCGTCGTGCTCATGTGCACCGACCCTACCAAGTCGTCTCTGAACCCAAACCTGTACCGCCCGACATTTGCCG
GTTTTGTTGACACGGACATTTCAAATGGGAAGATATCGCTGAGAAGCTTGATCGACCGCTCGGTGGTGGAGAGCTTTGGA
GCCGGGGGCAAGACGTGCATCCTGTCCAGGGTCTACCCGTCGCTCGCCATCGGCAACAACGCGCGCCTCTACGTGTTCAA
CAACGGGAAGGCGGACGTCAGGGTGTCCCGTCTCACTGCATGGGAGATGAAGAAGCCACTCATGAATGGCGCATGA
Sb_6:43307300-43307308:- does not have available information here.