
Microexon ID | Sb_6:43307300-43307308:- |
Species | Sorghum Bicolor | Coordinates | 6:43307300..43307308 |
Microexon Cluster ID | MEP22 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | Glyco_hydro_32N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | YSKYAMMGRACYGSYTWYCAYTTYCARCCYSMCAARAAYTGGATGAAYGATCCYAAYGGTCCAATGTWYTACAAGGGATKGTACCAYYTSTTCTAYCARTACAAYCCV |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | ATCCCAACG |
Microexon Amino Acid seq | DPNA |
Microexon-tag DNA Seq | CTGCTGAGAACCGGCTACCACTTCCAGCCTCCCAAGAACTGGATCAATGATCCCAACGCTCCGTTCTACTACAAGGGGTGGTACCATTTCTTCTACCAGTACAACCCC |
Microexon-tag Amino Acid Seq | MLRTGYHFQPPKNWINDPNAPFYYKGWYHFFYQYNP |
Microexon-tag spanning region | 43306799-43307975 |
Microexon-tag prediction score | 0.9708 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | OQU81520x |
Reference Transcript ID | OQU81520 |
Gene ID | SORBI_3006G070298 |
Gene Name | NA |
Transcript ID | OQU81520 |
Protein ID | |
Gene ID | SORBI_3006G070298 |
Gene Name | |
Pfam domain motif | Glyco_hydro_32N |
Motif E-value | 4.70E-100 |
Motif start | 60 |
Motif end | 398 |
Protein seq | >OQU81520 MRALAGARLLAWSWLAVLLLPVVVQLAGASHVVYEEEKLAVEAAAVPPSIVHPLLRTGYHFQPPKNWINDPNAPFYYKGW YHFFYQYNPKGAVWGNIVWAHSVSRDLINWMALEPAIKPSIPSDKYGCWSGSATTMPDGTPVIMYTGIDRPNTNYQVQNV AYPRNKSDPLLREWVKPSYNPVIVPEGGINATQFRDPTTAWRATAGGDGHWRLLIGSVRTTTTTGATAPPRGVAYVYRSR DFRRWTRVRRPLHSAATGMWECPDFYPVSSDEDGRRRRVGLETSVPSGARVKHVLKNSLDLRRYDYYTVGTYDRDAERYV PDDPAGDDDGERRLRYDYGNFYASKTFYDPAKRRRILWGWANESDTAADDVAKGWAGIQAIPRTVWLDPSGKQLLQWPVE EVEALRGKAVTLKNRVIKPGQHVEVTGIQTAQADVEVSFEVSPSALAGAERLDPALADDAERLCGVKRADVKGGVGPFGL WVLASANLKERTAVFFRVFKAAAGSSNNKPVVLMCTDPTKSSLNPNLYRPTFAGFVDTDISNGKISLRSLIDRSVVESFG AGGKTCILSRVYPSLAIGNNARLYVFNNGKADVRVSRLTAWEMKKPLMNGA* |
CDS seq | >OQU81520 ATGAGAGCGCTAGCAGGAGCAAGGCTTCTTGCTTGGTCATGGCTGGCGGTACTGCTGCTGCCGGTGGTGGTGCAGCTGGC TGGAGCCTCCCATGTCGTCTACGAGGAAGAGAAGCTCGCGGTGGAGGCGGCGGCGGTGCCGCCGTCCATCGTCCACCCGC TGCTGAGAACCGGCTACCACTTCCAGCCTCCCAAGAACTGGATCAATGATCCCAACGCTCCGTTCTACTACAAGGGGTGG TACCATTTCTTCTACCAGTACAACCCCAAAGGCGCTGTATGGGGCAACATCGTATGGGCGCACTCGGTCTCACGCGACCT CATCAACTGGATGGCATTAGAGCCGGCGATCAAGCCCAGCATCCCCTCCGACAAGTACGGCTGCTGGTCGGGCTCGGCGA CGACCATGCCCGACGGCACGCCGGTGATCATGTACACCGGCATCGACCGCCCCAACACCAACTACCAGGTCCAGAACGTC GCCTACCCTCGGAACAAGTCCGACCCGCTGCTCCGGGAGTGGGTGAAGCCGTCCTACAACCCGGTCATCGTGCCGGAAGG CGGCATCAACGCGACGCAGTTCCGCGACCCGACCACGGCCTGGCGCGCCACCGCCGGCGGCGACGGCCACTGGCGGCTGC TCATCGGCAGCGTGAGGACGACGACGACGACGGGGGCCACGGCGCCGCCCCGGGGCGTGGCGTATGTGTACCGGAGCCGC GACTTCAGGCGGTGGACGCGGGTCCGGCGGCCGCTGCACTCGGCGGCGACGGGGATGTGGGAGTGCCCGGACTTCTACCC GGTGAGCAGCGACGAGGACGGCCGCCGCCGGCGCGTGGGGCTCGAGACGTCCGTGCCGTCGGGCGCAAGGGTGAAGCACG TGCTCAAGAACAGCCTCGACCTGCGGCGGTACGACTACTACACCGTCGGCACGTACGACCGGGACGCCGAGCGGTACGTG CCGGACGACCCCGCCGGCGACGACGACGGCGAGCGCCGCCTGCGGTACGACTACGGCAACTTCTACGCGTCCAAGACGTT CTACGACCCGGCGAAGCGGCGGCGGATCCTGTGGGGCTGGGCCAACGAGTCCGACACCGCCGCCGACGATGTCGCCAAAG GGTGGGCCGGGATTCAGGCGATTCCGAGGACGGTGTGGCTGGACCCCAGCGGGAAGCAGCTGCTGCAGTGGCCCGTCGAG GAGGTAGAGGCGCTCAGAGGCAAGGCGGTCACTCTCAAGAACAGGGTAATCAAGCCAGGACAGCACGTCGAGGTGACCGG GATACAAACAGCACAGGCTGACGTGGAGGTGAGCTTCGAGGTGTCGCCGTCGGCCCTGGCGGGAGCGGAGCGGCTGGACC CGGCGCTCGCCGACGACGCCGAGAGGCTGTGCGGCGTCAAGCGCGCCGACGTGAAGGGCGGCGTGGGTCCGTTCGGGCTG TGGGTGCTGGCCTCCGCCAACCTCAAGGAGAGAACCGCGGTGTTCTTCAGGGTGTTCAAGGCCGCCGCCGGCAGCAGCAA CAACAAGCCCGTCGTGCTCATGTGCACCGACCCTACCAAGTCGTCTCTGAACCCAAACCTGTACCGCCCGACATTTGCCG GTTTTGTTGACACGGACATTTCAAATGGGAAGATATCGCTGAGAAGCTTGATCGACCGCTCGGTGGTGGAGAGCTTTGGA GCCGGGGGCAAGACGTGCATCCTGTCCAGGGTCTACCCGTCGCTCGCCATCGGCAACAACGCGCGCCTCTACGTGTTCAA CAACGGGAAGGCGGACGTCAGGGTGTCCCGTCTCACTGCATGGGAGATGAAGAAGCCACTCATGAATGGCGCATGA |
Sb_6:43307300-43307308:- does not have available information here.