
Microexon ID | Sb_4:51653429-51653437:+ |
Species | Sorghum Bicolor | Coordinates | 4:51653429..51653437 |
Microexon Cluster ID | MEP22 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | Glyco_hydro_32N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | YSKYAMMGRACYGSYTWYCAYTTYCARCCYSMCAARAAYTGGATGAAYGATCCYAAYGGTCCAATGTWYTACAAGGGATKGTACCAYYTSTTCTAYCARTACAAYCCV |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | ACCCCAACG |
Microexon Amino Acid seq | DPNA |
Microexon-tag DNA Seq | CTGCTCAGGACAGGGTACCATTTCCAGCCGCCAATGAACTGGATCAACGACCCCAACGCTCCGATGTACTACAAGGGATGGTATCACCTGTTCTACCAGTACAACCCC |
Microexon-tag Amino Acid Seq | MLRTGYHFQPPMNWINDPNAPMYYKGWYHLFYQYNP |
Microexon-tag spanning region | 51652672-51654014 |
Microexon-tag prediction score | 0.9671 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | KXG30339x |
Reference Transcript ID | KXG30339 |
Gene ID | SORBI_3004G166700 |
Gene Name | NA |
Transcript ID | KXG30339 |
Protein ID | |
Gene ID | SORBI_3004G166700 |
Gene Name | |
Pfam domain motif | Glyco_hydro_32N |
Motif E-value | 6.40E-102 |
Motif start | 58 |
Motif end | 374 |
Protein seq | >KXG30339 MGTRQRVLAPWAVLLLTALQLAGASHVVVHRSLEAEAAAAPPSVPASIVSPLLRTGYHFQPPMNWINDPNAPMYYKGWYH LFYQYNPKGAVWGNIVWAHSISRDLINWIALEPAIYPSIPSDQYGCWSGSATMLQDGTPAILYTGINRPDINYQVQVLAF PKNASDPLLREWEKPAAYNPVAAPVGGINATQFRDPTTAWYADGHWRMLVGSVRDTRGMAIVYRSRDFRRWTKAKHPLHS ALTGMWECPDFFPVSGPALQDGVDTSDAGAKYVLKNSLDLTRYDYYTIGSYDKRKDRYYPDNPNGDYHRLRYDYGNFYAS KTFYDPAKRRRVLLGWANESDSVPDDKAKGWAGIHAIPRKIWLDPSGKQLLQWPIEEVEKLRGKAVTVGGKVVKPGEHFE VTGIATYQADVEVSFEISSLDKAEPFDPAYDNDAQKLCGVKGADVKGGVGPFGLWVLASADLQEKTAVFFRVFKDGYGKP KVLMCTDPTKSSLSPDLYKPTFAGFVDTDISSGKIALRSLIDRSVVESFGEKGRTCILSRVYPSIAIGKEAHLYVFNNGD VDVKVSSLTAWEMKKPLMNGA* |
CDS seq | >KXG30339 ATGGGGACTCGGCAACGGGTCCTCGCGCCATGGGCGGTGCTGCTGCTCACCGCGCTGCAGCTCGCCGGTGCCTCCCATGT TGTCGTCCACCGGAGCCTGGAGGCCGAGGCGGCGGCGGCACCGCCGTCGGTGCCGGCCTCCATTGTCAGCCCCCTGCTCA GGACAGGGTACCATTTCCAGCCGCCAATGAACTGGATCAACGACCCCAACGCTCCGATGTACTACAAGGGATGGTATCAC CTGTTCTACCAGTACAACCCCAAGGGCGCAGTATGGGGCAACATCGTGTGGGCTCACTCCATATCACGCGACCTCATCAA CTGGATCGCGCTGGAGCCCGCCATCTACCCGAGCATCCCCTCCGACCAGTACGGCTGCTGGTCGGGCTCGGCGACGATGC TGCAAGACGGCACGCCGGCGATCCTCTACACTGGGATCAACCGCCCGGACATCAACTACCAGGTGCAGGTGCTCGCCTTC CCCAAGAACGCGTCGGACCCGCTGCTCCGGGAGTGGGAGAAGCCGGCGGCGTACAACCCGGTGGCGGCGCCGGTGGGCGG CATCAACGCGACGCAGTTCCGCGACCCGACGACGGCGTGGTACGCCGACGGGCACTGGCGGATGCTGGTGGGCAGCGTGC GGGACACCCGGGGCATGGCGATCGTGTACCGGAGCCGGGACTTCCGGCGCTGGACGAAAGCCAAGCACCCGCTGCACTCG GCGCTGACGGGGATGTGGGAGTGCCCGGACTTCTTCCCGGTGTCCGGCCCGGCGCTCCAGGACGGGGTCGACACCTCCGA CGCCGGCGCCAAGTACGTGCTCAAGAACAGCCTCGACCTCACGCGGTACGACTACTACACCATCGGGTCGTATGATAAGA GGAAGGACCGGTACTACCCGGATAATCCGAACGGCGACTACCACCGGCTCCGGTACGACTACGGCAACTTCTACGCGTCC AAGACGTTCTATGATCCGGCGAAGCGGCGGCGGGTGCTCCTCGGGTGGGCTAACGAGTCCGACAGCGTCCCCGACGACAA GGCCAAGGGATGGGCCGGCATCCATGCGATCCCAAGGAAGATCTGGCTGGATCCCAGCGGGAAGCAGCTGCTGCAGTGGC CCATCGAGGAGGTCGAGAAGCTCAGAGGGAAGGCCGTCACTGTGGGCGGCAAGGTGGTGAAGCCCGGCGAGCATTTTGAG GTCACAGGCATCGCAACTTACCAGGCTGATGTGGAGGTGAGCTTCGAGATCTCGAGCTTGGACAAGGCGGAGCCCTTCGA CCCGGCGTACGACAACGACGCGCAGAAGCTGTGCGGCGTCAAGGGCGCCGACGTCAAGGGCGGCGTAGGGCCCTTCGGCC TGTGGGTGTTGGCCTCTGCCGACCTGCAGGAGAAGACGGCCGTCTTCTTCAGAGTCTTCAAGGACGGCTACGGCAAGCCC AAGGTGCTCATGTGCACCGACCCCACCAAGTCATCGCTTAGTCCAGATCTGTACAAGCCGACCTTCGCCGGCTTCGTCGA CACTGACATTTCAAGCGGGAAGATTGCTCTTAGAAGCTTGATCGATCGGTCCGTGGTCGAGAGCTTCGGCGAAAAAGGAA GGACTTGCATCCTGTCACGGGTCTACCCGTCCATCGCCATTGGAAAGGAGGCTCACCTCTACGTTTTCAACAACGGTGAC GTGGACGTCAAGGTGTCAAGCCTGACAGCATGGGAGATGAAGAAGCCGCTGATGAACGGCGCCTAA |
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