| Microexon ID | Pt_3:13502311-13502319:+ |
| Species | Populus Trichocarpa | Coordinates | 3:13502311..13502319 |
| Microexon Cluster ID | MEP22 |
| Size | 9 |
| Phase | 1 |
| Pfam Domain Motif | Glyco_hydro_32N |
| Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
| Microexon location in the Microexon-tag | 2 |
| Microexon-tag DNA Seq | YSKYAMMGRACYGSYTWYCAYTTYCARCCYSMCAARAAYTGGATGAAYGATCCYAAYGGTCCAATGTWYTACAAGGGATKGTACCAYYTSTTCTAYCARTACAAYCCV |
| Logo of Microexon-tag DNA Seq |  |
| Alignment of exons |  |
| Microexon DNA seq | ATCCCAACG |
| Microexon Amino Acid seq | DPNG |
| Microexon-tag DNA Seq | TGGCAAAGAACTGCTTTCCATTTTCAACCTGAAGAGAATTGGATGAACGATCCCAACGGTCCATTGTATTACAAAGGCTGGTACCACTTCTTCTACCAATACAATCCA |
| Microexon-tag Amino Acid Seq | WQRTAFHFQPEENWMNDPNGPLYYKGWYHFFYQYNP |
| Microexon-tag spanning region | 13500884-13503193 |
| Microexon-tag prediction score | 0.9655 |
| Overlapped with the annotated transcript (%) | 100 |
| New Transcript ID | Potri.003G112600.1.v4.1x |
| Reference Transcript ID | Potri.003G112600.1.v4.1 |
| Gene ID | Potri.003G112600.v4.1 |
| Gene Name | NA |
| Transcript ID | Potri.003G112600.1.v4.1 |
| Protein ID | |
| Gene ID | Potri.003G112600.v4.1 |
| Gene Name | |
| Pfam domain motif | Glyco_hydro_32N |
| Motif E-value | 2.20E-105 |
| Motif start | 136 |
| Motif end | 454 |
| Protein seq | >Potri.003G112600.1.v4.1 MADPSPLLPVSNSLEPSYSPAPEGAVSAGCPATHLRRSKKVLIAVFSGLLVVSLILATINNNNGGRHVQYHSQEDEDASL ATPKEMAKPETLLPAGYSRGVSAGVSEKANVNLKGAQVKDYPWNNSMLSWQRTAFHFQPEENWMNDPNGPLYYKGWYHFF YQYNPHAAVWGDIVWGHAVSKDLIHWLHLPLAMVADKWYDKNGVWTGSATILPDGKIVMLYTGSTNESVQVQNLAYPADH DDPLLLKWVKYSGNPVLVPPPGIGAKDFRDPTTAWKTSEGKWRIIIGSKINKTGIALVYDTEDFINYELLSGILHGVPKT GMWECVDFYPVSKTGQNGLDTSVNGPQVKHVIKTSLDDDRHDYYALGTYADKVGKWYPDNPEIDVGIGIRYDYGIFYASK TFYDQSKGRRVLWGWIGESDSEVADVKKGWASLQGIPRTVVLDTKTGSNLLQWPVEEVESLRLKSKNFNNIEVKAGSAVP LELDGATQLDIVAEFELDRKAIERTAESNVEFSCSTNGGASHRGALGPFGLLVLADDDLTEYTPVYFFVAKGNNGSLKTF FCTDQSRSSVANDVRKEIYGSYVPVLEGEKLSVRILVDHSIIESFAQGGRTCITSRVYPTRAIYGSARLFLFNNATEAGV TSSLKIWNMNSAFIRPYSNEQQ* |
| CDS seq | >Potri.003G112600.1.v4.1 ATGGCGGACCCAAGTCCATTGCTTCCAGTTTCCAATTCCTTAGAACCCAGCTATAGTCCTGCCCCAGAAGGGGCCGTCTC AGCCGGATGTCCGGCGACCCATCTCCGACGATCCAAGAAAGTACTCATCGCGGTCTTCTCTGGGTTGCTTGTTGTTTCTT TGATTTTAGCTACAATTAATAATAACAATGGAGGTCGACATGTCCAATATCATTCACAAGAAGACGAAGATGCGTCCTTG GCTACGCCAAAAGAAATGGCGAAACCCGAGACTTTGTTGCCAGCAGGATATTCACGTGGGGTATCTGCCGGTGTGTCAGA GAAGGCCAACGTGAATTTGAAGGGAGCTCAGGTGAAAGATTATCCGTGGAACAATAGCATGTTATCATGGCAAAGAACTG CTTTCCATTTTCAACCTGAAGAGAATTGGATGAACGATCCCAACGGTCCATTGTATTACAAAGGCTGGTACCACTTCTTC TACCAATACAATCCACATGCTGCCGTGTGGGGCGACATAGTCTGGGGCCATGCTGTATCAAAAGACTTGATCCATTGGCT CCACCTCCCATTGGCGATGGTTGCCGATAAATGGTACGACAAGAATGGTGTCTGGACTGGCTCTGCCACAATCCTCCCTG ATGGTAAGATCGTCATGCTATACACTGGATCCACTAATGAGTCAGTCCAGGTACAAAATCTTGCATATCCAGCAGACCAC GATGATCCTCTCCTCCTCAAGTGGGTCAAATACTCTGGCAATCCTGTTTTAGTCCCGCCACCAGGTATTGGTGCCAAGGA CTTCCGTGACCCCACAACAGCCTGGAAAACTTCTGAAGGGAAGTGGCGCATTATAATAGGATCCAAAATTAATAAAACTG GCATAGCTTTAGTCTATGATACTGAAGACTTCATAAATTATGAGTTGTTAAGTGGAATCCTTCACGGTGTCCCTAAAACT GGCATGTGGGAATGTGTGGACTTTTACCCTGTGTCGAAAACAGGTCAGAATGGATTGGATACATCTGTTAATGGTCCTCA AGTGAAGCATGTGATCAAGACAAGCCTGGATGATGATAGGCATGATTACTATGCACTTGGGACTTATGCTGACAAGGTTG GAAAATGGTATCCAGATAATCCAGAGATCGATGTTGGTATTGGTATCAGGTACGATTATGGCATATTCTATGCCTCCAAG ACATTTTATGATCAGAGTAAAGGAAGGAGAGTGTTGTGGGGCTGGATTGGAGAGTCTGATAGTGAAGTCGCCGATGTAAA GAAAGGATGGGCATCTCTTCAGGGCATTCCAAGGACAGTTGTGTTGGATACAAAGACAGGTAGCAATCTGCTTCAATGGC CAGTTGAAGAGGTAGAGAGCTTGAGATTAAAAAGCAAGAATTTTAACAACATAGAGGTTAAGGCAGGGTCAGCTGTACCG CTTGAACTCGATGGAGCCACACAGCTAGACATCGTTGCTGAGTTTGAGTTAGACAGGAAGGCTATAGAGAGAACAGCCGA ATCCAATGTGGAGTTCAGCTGCAGCACCAATGGTGGGGCTTCTCACCGCGGTGCATTGGGACCATTTGGCCTTCTAGTTC TTGCAGATGACGATCTCACCGAGTATACTCCCGTATACTTTTTTGTTGCCAAAGGAAATAATGGCAGCCTCAAAACTTTC TTCTGCACTGACCAGTCAAGGTCTTCTGTGGCCAACGACGTTAGAAAAGAAATTTATGGGAGCTATGTTCCTGTATTAGA GGGTGAAAAGTTATCAGTTAGGATATTGGTGGATCATTCGATAATTGAAAGTTTTGCTCAAGGTGGTAGGACGTGCATCA CTTCCCGGGTTTATCCGACGAGGGCAATCTATGGTTCTGCTAGGCTGTTTTTGTTCAACAATGCTACTGAGGCTGGTGTC ACTTCTTCACTCAAGATATGGAATATGAATTCAGCATTCATACGCCCATATTCTAATGAACAACAGTAG |
Pt_3:13502311-13502319:+ does not have available information here.