| Microexon ID | Pt_16:5836072-5836080:- |
| Species | Populus Trichocarpa | Coordinates | 16:5836072..5836080 |
| Microexon Cluster ID | MEP22 |
| Size | 9 |
| Phase | 1 |
| Pfam Domain Motif | Glyco_hydro_32N |
| Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
| Microexon location in the Microexon-tag | 2 |
| Microexon-tag DNA Seq | YSKYAMMGRACYGSYTWYCAYTTYCARCCYSMCAARAAYTGGATGAAYGATCCYAAYGGTCCAATGTWYTACAAGGGATKGTACCAYYTSTTCTAYCARTACAAYCCV |
| Logo of Microexon-tag DNA Seq |  |
| Alignment of exons |  |
| Microexon DNA seq | ATCCAAATG |
| Microexon Amino Acid seq | DPNA |
| Microexon-tag DNA Seq | GTCCATAGAACCGGGTATCACTTTCAGCCTCCTAGGAACTGGATCAACGATCCAAATGCACCTATGTACTACAAGGGGCTATACCATCTATTCTACCAATACAACCCC |
| Microexon-tag Amino Acid Seq | VHRTGYHFQPPRNWINDPNAPMYYKGLYHLFYQYNP |
| Microexon-tag spanning region | 5835905-5837433 |
| Microexon-tag prediction score | 0.9553 |
| Overlapped with the annotated transcript (%) | 100 |
| New Transcript ID | Potri.016G077500.1.v4.1x |
| Reference Transcript ID | Potri.016G077500.1.v4.1 |
| Gene ID | Potri.016G077500.v4.1 |
| Gene Name | NA |
| Transcript ID | Potri.016G077500.1.v4.1 |
| Protein ID | |
| Gene ID | Potri.016G077500.v4.1 |
| Gene Name | |
| Pfam domain motif | Glyco_hydro_32N |
| Motif E-value | 1.90E-106 |
| Motif start | 52 |
| Motif end | 369 |
| Protein seq | >Potri.016G077500.1.v4.1 MMAMPNTLSVLALFALFFVLSNNGAEASHKIYPQFQTLSVENVNQVHRTGYHFQPPRNWINDPNAPMYYKGLYHLFYQYN PKGAVWGNIVWAHSVSKDLINWESLEPALYPSKWFDNYGCWSGSATILPNGEPVIFYTGIADKNNSQIQNYAVPANLSDP YLREWVKPDDNPIVNPDVSVNGSAFRDPTTAWWADGHWRILIGSRRNHVGVAYLYRSRDLKKWAKTKHPLHSVQRTGMWE CPDFFPVSSFGENGLDPSVNGQNVKHALKVSLDLTRYEYYTLGTYDNKKEKYFPDEGLVDGWAGLRLDYGNFYASKTFFD PSTNRRILWGWVNESDAVQQDTNKGWAGILSIPRKVWLDPSGKQLLQWPVVELEKLRGHNVQLSNQKLNQGDHVQVKGIT VAQADVDVTFSFPSLDKAEPFDPKWAKLDALDVCAQKGSKAPGGLGPFGLLTLASENLEEFTPVFFKVFKAVDKHKVLLC SDARSSSLGEGLYKPSFAGFVDVDLTDKKLSLRSLIDHSVVESFGAGGRTAITSRVYPTIAVFEKAHLYVFNNGSETITV ENLNAWSMNLPVMNVPIKNRGGENPRNE* |
| CDS seq | >Potri.016G077500.1.v4.1 ATGATGGCTATGCCAAACACTCTCTCAGTTCTTGCTTTGTTTGCTTTGTTTTTTGTGCTAAGTAACAATGGAGCCGAGGC TTCTCATAAGATTTATCCTCAGTTTCAGACTCTTAGTGTTGAGAACGTGAATCAAGTCCATAGAACCGGGTATCACTTTC AGCCTCCTAGGAACTGGATCAACGATCCAAATGCACCTATGTACTACAAGGGGCTATACCATCTATTCTACCAATACAAC CCCAAAGGCGCAGTGTGGGGTAACATTGTTTGGGCTCATTCAGTTTCAAAGGATTTGATCAATTGGGAATCCCTTGAGCC TGCACTCTACCCTTCTAAATGGTTTGATAATTATGGATGTTGGTCTGGTTCAGCGACAATCCTTCCAAACGGTGAGCCTG TTATATTCTACACGGGTATTGCCGATAAAAATAACAGTCAGATCCAAAACTACGCAGTACCCGCAAACTTGTCGGATCCA TATCTTCGTGAATGGGTTAAGCCCGATGATAATCCGATAGTGAACCCGGATGTTAGTGTAAACGGTAGCGCGTTCCGTGA TCCGACCACTGCTTGGTGGGCTGATGGGCATTGGAGGATTTTGATAGGCAGCAGGAGGAACCATGTAGGGGTGGCATATT TGTACAGGAGTAGGGATTTGAAGAAATGGGCCAAGACCAAACACCCGTTACATTCAGTTCAGCGTACAGGTATGTGGGAA TGCCCAGATTTTTTCCCTGTTTCATCATTCGGTGAAAATGGGCTGGATCCTTCAGTTAATGGACAAAATGTGAAACATGC ATTGAAGGTTAGCTTAGACTTGACAAGATACGAGTACTATACACTGGGTACTTACGATAATAAGAAGGAAAAGTATTTTC CTGATGAGGGCTTAGTTGATGGTTGGGCTGGTCTTAGGTTAGATTATGGAAACTTTTATGCTTCTAAGACATTCTTTGAC CCAAGTACGAATAGGAGGATTTTGTGGGGCTGGGTTAATGAGTCTGATGCTGTTCAACAAGATACGAACAAAGGGTGGGC AGGAATTCTGTCGATTCCTAGGAAGGTATGGCTAGATCCAAGTGGAAAGCAATTGCTGCAGTGGCCTGTTGTAGAATTGG AGAAATTAAGAGGGCACAATGTTCAACTGAGCAATCAAAAGCTCAACCAAGGTGATCATGTTCAAGTTAAAGGCATCACT GTTGCTCAGGCTGATGTTGATGTAACCTTTTCTTTCCCAAGCTTGGACAAAGCTGAGCCTTTTGATCCAAAATGGGCTAA GCTTGATGCACTTGATGTATGTGCCCAAAAGGGTTCCAAAGCTCCTGGTGGACTTGGGCCATTTGGACTCCTGACATTAG CTTCAGAAAATCTTGAAGAATTCACTCCTGTCTTCTTTAAAGTATTTAAAGCAGTAGACAAGCATAAAGTTCTGTTGTGC TCTGATGCAAGGAGCTCTTCCCTAGGTGAAGGACTGTATAAACCATCTTTTGCTGGATTTGTTGATGTTGATTTAACTGA CAAGAAACTTTCGCTCAGAAGTTTGATTGATCACTCTGTTGTAGAGAGTTTTGGAGCTGGAGGAAGAACTGCCATCACAT CCAGGGTTTATCCAACCATTGCAGTCTTTGAAAAGGCTCACTTGTACGTGTTCAACAATGGCAGCGAGACCATCACAGTG GAGAATCTTAATGCTTGGAGTATGAACTTACCTGTGATGAATGTCCCTATAAAGAACCGAGGGGGAGAGAATCCACGCAA TGAATAA |
Pt_16:5836072-5836080:- does not have available information here.