
Microexon ID | Ps_NC_039368.1:101011332-101011340:+ |
Species | Papaver somniferum | Coordinates | NC_039368.1:101011332..101011340 |
Microexon Cluster ID | MEP22 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | Glyco_hydro_32N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | YSKYAMMGRACYGSYTWYCAYTTYCARCCYSMCAARAAYTGGATGAAYGATCCYAAYGGTCCAATGTWYTACAAGGGATKGTACCAYYTSTTCTAYCARTACAAYCCV |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | ATCCAAATG |
Microexon Amino Acid seq | DPNG |
Microexon-tag DNA Seq | CATCTAAGAACTGGTTTTCACTTCCAACCTCCCAAAAACTGGATCAACGATCCAAATGGACCAATGTATTATAATGGAATCTACCATCTTTTCTACCAATACAATCCT |
Microexon-tag Amino Acid Seq | HLRTGFHFQPPKNWINDPNGPMYYNGIYHLFYQYNP |
Microexon-tag spanning region | 101010590-101019194 |
Microexon-tag prediction score | 0.9575 |
Overlapped with the annotated transcript (%) | 3.2 |
New Transcript ID | XM_026570663.1x |
Reference Transcript ID | XM_026570663.1 |
Gene ID | NA |
Gene Name | NA |
Transcript ID | XM_026570663.1 |
Protein ID | XP_026426448.1 |
Gene ID | LOC113322556 |
Gene Name | NA |
Pfam domain motif | Glyco_hydro_32N |
Motif E-value | 4.6e-110 |
Motif start | 49 |
Motif end | 367 |
Protein seq | >XP_026426448.1 MAKFICWFTLLFLCFNLSVEALHKIYPHFQSLVAVKAPVKLGHLRTGFHFQPPKNWINDPNGPMYYKGVYHLFYQYNPKG AVWGNIVWAHSVSTDLINWFSLEHAIAPSKPFDINGCWSGSATILPGNKPVILYTGIDPDERQVQNIAVPKNLSDPFLRE WVKPDYNPIIKPSIGVNASAFRDPTTAWWSKDGHWRLVVGSKRDMRGTAVLYRSKDFIHWTKAKHLLHSSATTGMWECPD FYPVSLNGKQGLDTSSVGDGVKHVLKVSLDLTRFEYYTLGQYFTSKDRYVPDNTSVDDSTGLRYDYGNFYASKSFFDPSK NRRILWGWANESDRTPDDQIAKGWAGVQAIPRTVWLDRNEKQLLQWPIEEVNHLRSGHGRVEMTKIPLHKGSLIEIEGIT PAQADVEITFRIPSLEHAEPFDPKWVDAERLCGEKDASVSGGIGPFGLLTLASSDLQEYTAVFFRVFKSNDKHKVLMCSG GIRSSLTHDKMYKPSYGGFVDVDISNGKLSLRSLIDNSVVESFGAGGKTCILSRAYPTLAIGNNAHLYVFNNGTQAVKIG KLKAWSMNSPSMN* |
CDS seq | >XM_026570663.1 ATGGCGAAGTTCATTTGTTGGTTTACTCTTCTTTTCTTATGTTTCAATCTCAGTGTTGAAGCATTACATAAAATATATCC ACATTTTCAATCACTTGTGGCAGTGAAAGCACCGGTGAAACTAGGACATCTAAGAACTGGTTTTCACTTCCAACCTCCCA AAAACTGGATCAACGATCCAAATGGCCCAATGTATTATAAAGGCGTTTATCATCTTTTCTACCAGTATAATCCCAAAGGT GCTGTGTGGGGGAATATTGTATGGGCACACTCAGTATCCACTGATTTGATAAACTGGTTTTCCCTTGAACATGCAATTGC CCCTTCCAAACCATTTGACATAAATGGGTGCTGGTCAGGTTCTGCAACTATACTTCCTGGCAACAAACCTGTTATACTTT ACACTGGTATTGATCCAGACGAGAGACAAGTACAAAACATTGCAGTGCCGAAGAACTTGTCTGACCCATTCTTAAGAGAA TGGGTGAAGCCTGATTACAACCCAATAATCAAACCAAGCATTGGTGTGAATGCGAGTGCGTTTCGAGATCCCACAACTGC ATGGTGGAGTAAAGATGGGCACTGGAGATTAGTAGTTGGTAGCAAGAGAGATATGAGAGGAACCGCGGTGTTGTATAGAA GCAAGGATTTTATTCATTGGACTAAAGCCAAACATTTGTTACATTCTTCTGCTACTACTGGTATGTGGGAGTGCCCAGAT TTTTATCCAGTGTCGCTGAATGGGAAACAAGGATTAGACACTTCATCGGTTGGTGATGGTGTTAAACATGTGCTGAAAGT GAGCCTTGATCTTACAAGGTTCGAATATTACACTCTTGGTCAATATTTTACTAGCAAAGATCGATATGTACCAGACAACA CTTCAGTTGATGATAGTACAGGGTTAAGGTATGATTATGGAAATTTCTATGCATCCAAGTCGTTTTTCGATCCGTCAAAG AATAGAAGAATCTTGTGGGGATGGGCTAACGAATCCGATCGAACTCCAGATGATCAAATTGCTAAAGGCTGGGCTGGGGT TCAGGCAATTCCGAGGACAGTGTGGCTTGATAGAAATGAAAAACAACTCTTACAATGGCCTATTGAAGAGGTTAATCATT TACGAAGCGGTCACGGTCGAGTGGAGATGACCAAGATACCTCTTCATAAGGGAAGTCTCATTGAGATTGAAGGAATTACT CCTGCTCAGGCTGATGTTGAAATTACATTCCGTATACCAAGTTTGGAACATGCTGAACCATTTGATCCTAAATGGGTTGA TGCTGAAAGACTTTGCGGCGAAAAAGATGCTAGTGTCTCGGGTGGCATCGGACCTTTTGGATTGCTAACACTGGCGTCAA GTGACTTACAAGAGTATACTGCGGTATTTTTTAGGGTCTTCAAATCAAATGACAAACATAAAGTGCTTATGTGCTCTGGT GGTATTAGGTCTTCTTTAACACATGATAAGATGTACAAGCCATCTTACGGAGGTTTCGTAGATGTTGATATTAGTAATGG AAAGCTTTCCTTGAGAAGCTTGATCGATAATTCAGTCGTAGAGAGTTTTGGTGCTGGAGGAAAAACATGCATCTTATCAA GGGCTTATCCAACACTGGCTATTGGAAATAATGCTCATTTGTATGTTTTCAACAATGGAACTCAAGCGGTAAAGATTGGG AAGTTAAAAGCATGGTCAATGAATAGTCCCTCAATGAATTGA |
Ps_NC_039368.1:101011332-101011340:+ does not have available information here.