
Microexon ID | Ps_NC_039366.1:139148674-139148682:- |
Species | Papaver somniferum | Coordinates | NC_039366.1:139148674..139148682 |
Microexon Cluster ID | MEP22 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | Glyco_hydro_32N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | YSKYAMMGRACYGSYTWYCAYTTYCARCCYSMCAARAAYTGGATGAAYGATCCYAAYGGTCCAATGTWYTACAAGGGATKGTACCAYYTSTTCTAYCARTACAAYCCV |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Ps_NC_039366.1:139148674-139148682:- does not have available information here.
Transcript ID | XM_026559627.1 |
Protein ID | XP_026415412.1 |
Gene ID | LOC113310830 |
Gene Name | NA |
Pfam domain motif | Glyco_hydro_32N |
Motif E-value | 7.5e-104 |
Motif start | 18 |
Motif end | 341 |
Protein seq | >XP_026415412.1 MSETGSSDGLGINRTGYHFQSPKNWINDPNGPMYYNGIYHLFYQYNPKAVIWESALSWGHSVSKDMVNWFRLDVAMSPTE TYDINGCWSGSATILPGNKLVMLYTGIDINNGQVQNIAVPKDLSDPLLVEWEKLDQNPVILRPDDITPDKFRDPTTAWLG EDGHWRILIGSEKNNKVAALLFKSNDFMTWTESEDAFHSAEPHTGMWECLDFFPMSLKGKEALDTSAKGDDIKYVFKVSI QDTFTDFYTVGNYFVNNGEYYIPENTVGDPYSPVTGLRLDYGKFYASKTFFDEAKNRRILWGWVNEPDSNADAIARGWAG IQSIPRTLWLDKNERQLLQWPITELETLRTNEVEYTKKLLTEGKHFEVENVTAAQADIEVTFRIPNLENAEVFDPSWVDA QQLSGEKGATGKGGIGPFGLLTLASKDLEEYTAVFFRVFRAQDKYVVLMGSGGSRSSLRGEGLLHKPTYGAFVDVDLVDG EISLRCLIDHSVVESFGAGGKACITTRTYPTLAVGKEAHLYAFNYGSETVEIAKLNAWTMKTPEMNLNDGKALLRE* |
CDS seq | >XM_026559627.1 ATGTCAGAAACTGGATCATCAGACGGGTTAGGAATTAACAGAACAGGTTATCACTTTCAGTCCCCAAAAAACTGGATTAA CGACCCAAATGGACCTATGTATTATAACGGCATCTACCATCTTTTTTACCAATATAATCCCAAAGCTGTTATTTGGGAAA GTGCACTTTCATGGGGCCATTCTGTATCAAAAGATATGGTCAACTGGTTTCGCCTTGATGTTGCAATGTCACCTACGGAA ACGTATGATATCAACGGGTGTTGGTCAGGCTCTGCCACTATCCTCCCTGGTAACAAGCTGGTGATGCTTTACACAGGCAT TGATATAAACAACGGACAAGTTCAGAACATTGCCGTACCAAAGGATTTATCAGATCCCTTACTCGTAGAATGGGAAAAGC TAGACCAAAATCCTGTTATCTTGAGACCGGATGACATTACTCCGGATAAGTTTCGAGACCCGACTACTGCATGGTTAGGT GAAGATGGGCATTGGAGAATTCTGATAGGAAGCGAGAAAAACAACAAAGTGGCGGCTTTGTTGTTTAAAAGTAATGACTT CATGACATGGACAGAATCTGAAGATGCATTTCATTCTGCTGAACCCCATACCGGTATGTGGGAATGCTTGGATTTTTTTC CAATGTCACTGAAAGGGAAAGAAGCATTAGACACTTCTGCAAAGGGAGACGATATTAAGTATGTCTTTAAGGTGAGCATT CAGGATACATTTACCGATTTTTATACAGTGGGGAACTATTTTGTGAACAATGGTGAGTACTATATACCTGAGAACACAGT AGGCGATCCGTATTCGCCAGTTACTGGTCTAAGATTAGATTATGGCAAATTCTATGCATCTAAAACATTCTTTGATGAGG CGAAAAACAGAAGGATATTGTGGGGATGGGTCAATGAGCCGGATTCCAATGCAGATGCCATTGCTAGAGGATGGGCTGGT ATTCAGTCAATTCCGAGGACACTGTGGCTGGATAAAAATGAAAGACAACTCCTACAATGGCCAATCACGGAACTGGAAAC CTTGAGAACAAATGAAGTGGAGTACACTAAAAAACTTCTGACCGAGGGAAAACACTTTGAAGTTGAAAACGTAACAGCAG CGCAGGCCGATATCGAAGTTACATTTCGTATACCGAATTTAGAAAATGCAGAAGTATTTGATCCTTCATGGGTTGACGCC CAACAGCTCAGTGGTGAGAAAGGTGCTACTGGTAAGGGTGGGATTGGACCATTTGGATTGTTAACCTTAGCTTCTAAAGA CTTAGAAGAATACACAGCAGTATTCTTTAGAGTTTTCAGAGCTCAAGACAAGTATGTGGTGCTCATGGGTTCTGGTGGCA GCAGGTCATCCTTAAGAGGAGAAGGACTACTACATAAACCCACATATGGAGCATTTGTGGATGTTGATTTGGTTGATGGG GAAATTTCTCTAAGATGCCTGATCGATCACTCAGTGGTGGAAAGCTTCGGTGCCGGAGGAAAAGCTTGTATCACAACTAG GACTTATCCGACGCTTGCAGTAGGAAAAGAAGCCCATCTATATGCATTCAACTACGGATCAGAGACTGTTGAGATTGCAA AATTAAATGCCTGGACAATGAAAACACCTGAAATGAATCTCAATGACGGGAAAGCCTTGCTGCGCGAATGA |
Microexon DNA seq | ACCCAAATG |
Microexon Amino Acid seq | DPNG |
Microexon-tag DNA Seq | ATTAACAGAACAGGTTATCACTTTCAGTCCCCAAAAAACTGGATTAACGACCCAAATGGACCTATGTATTATAACGGCATCTACCATCTTTTTTACCAATATAATCCC |
Microexon-tag Amino Acid seq | INRTGYHFQSPKNWINDPNGPMYYNGIYHLFYQYNP |
Transcript ID | XM_026559627.1 |
Gene ID | Ps.57556 |
Gene Name | NA |
Pfam domain motif | Glyco_hydro_32N |
Motif E-value | 7.5e-104 |
Motif start | 18 |
Motif end | 341 |
Protein seq | >XM_026559627.1 MSETGSSDGLGINRTGYHFQSPKNWINDPNGPMYYNGIYHLFYQYNPKAVIWESALSWGHSVSKDMVNWFRLDVAMSPTE TYDINGCWSGSATILPGNKLVMLYTGIDINNGQVQNIAVPKDLSDPLLVEWEKLDQNPVILRPDDITPDKFRDPTTAWLG EDGHWRILIGSEKNNKVAALLFKSNDFMTWTESEDAFHSAEPHTGMWECLDFFPMSLKGKEALDTSAKGDDIKYVFKVSI QDTFTDFYTVGNYFVNNGEYYIPENTVGDPYSPVTGLRLDYGKFYASKTFFDEAKNRRILWGWVNEPDSNADAIARGWAG IQSIPRTLWLDKNERQLLQWPITELETLRTNEVEYTKKLLTEGKHFEVENVTAAQADIEVTFRIPNLENAEVFDPSWVDA QQLSGEKGATGKGGIGPFGLLTLASKDLEEYTAVFFRVFRAQDKYVVLMGSGGSRSSLRGEGLLHKPTYGAFVDVDLVDG EISLRCLIDHSVVESFGAGGKACITTRTYPTLAVGKEAHLYAFNYGSETVEIAKLNAWTMKTPEMNLNDGKALLRE* |
CDS seq | >XM_026559627.1 ATGTCAGAAACTGGATCATCAGACGGGTTAGGAATTAACAGAACAGGTTATCACTTTCAGTCCCCAAAAAACTGGATTAA CGACCCAAATGGACCTATGTATTATAACGGCATCTACCATCTTTTTTACCAATATAATCCCAAAGCTGTTATTTGGGAAA GTGCACTTTCATGGGGCCATTCTGTATCAAAAGATATGGTCAACTGGTTTCGCCTTGATGTTGCAATGTCACCTACGGAA ACGTATGATATCAACGGGTGTTGGTCAGGCTCTGCCACTATCCTCCCTGGTAACAAGCTGGTGATGCTTTACACAGGCAT TGATATAAACAACGGACAAGTTCAGAACATTGCCGTACCAAAGGATTTATCAGATCCCTTACTCGTAGAATGGGAAAAGC TAGACCAAAATCCTGTTATCTTGAGACCGGATGACATTACTCCGGATAAGTTTCGAGACCCGACTACTGCATGGTTAGGT GAAGATGGGCATTGGAGAATTCTGATAGGAAGCGAGAAAAACAACAAAGTGGCGGCTTTGTTGTTTAAAAGTAATGACTT CATGACATGGACAGAATCTGAAGATGCATTTCATTCTGCTGAACCCCATACCGGTATGTGGGAATGCTTGGATTTTTTTC CAATGTCACTGAAAGGGAAAGAAGCATTAGACACTTCTGCAAAGGGAGACGATATTAAGTATGTCTTTAAGGTGAGCATT CAGGATACATTTACCGATTTTTATACAGTGGGGAACTATTTTGTGAACAATGGTGAGTACTATATACCTGAGAACACAGT AGGCGATCCGTATTCGCCAGTTACTGGTCTAAGATTAGATTATGGCAAATTCTATGCATCTAAAACATTCTTTGATGAGG CGAAAAACAGAAGGATATTGTGGGGATGGGTCAATGAGCCGGATTCCAATGCAGATGCCATTGCTAGAGGATGGGCTGGT ATTCAGTCAATTCCGAGGACACTGTGGCTGGATAAAAATGAAAGACAACTCCTACAATGGCCAATCACGGAACTGGAAAC CTTGAGAACAAATGAAGTGGAGTACACTAAAAAACTTCTGACCGAGGGAAAACACTTTGAAGTTGAAAACGTAACAGCAG CGCAGGCCGATATCGAAGTTACATTTCGTATACCGAATTTAGAAAATGCAGAAGTATTTGATCCTTCATGGGTTGACGCC CAACAGCTCAGTGGTGAGAAAGGTGCTACTGGTAAGGGTGGGATTGGACCATTTGGATTGTTAACCTTAGCTTCTAAAGA CTTAGAAGAATACACAGCAGTATTCTTTAGAGTTTTCAGAGCTCAAGACAAGTATGTGGTGCTCATGGGTTCTGGTGGCA GCAGGTCATCCTTAAGAGGAGAAGGACTACTACATAAACCCACATATGGAGCATTTGTGGATGTTGATTTGGTTGATGGG GAAATTTCTCTAAGATGCCTGATCGATCACTCAGTGGTGGAAAGCTTCGGTGCCGGAGGAAAAGCTTGTATCACAACTAG GACTTATCCGACGCTTGCAGTAGGAAAAGAAGCCCATCTATATGCATTCAACTACGGATCAGAGACTGTTGAGATTGCAA AATTAAATGCCTGGACAATGAAAACACCTGAAATGAATCTCAATGACGGGAAAGCCTTGCTGCGCGAATGA |