
Microexon ID | Ps_NC_039364.1:11162155-11162163:+ |
Species | Papaver somniferum | Coordinates | NC_039364.1:11162155..11162163 |
Microexon Cluster ID | MEP22 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | Glyco_hydro_32N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | YSKYAMMGRACYGSYTWYCAYTTYCARCCYSMCAARAAYTGGATGAAYGATCCYAAYGGTCCAATGTWYTACAAGGGATKGTACCAYYTSTTCTAYCARTACAAYCCV |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | ATCCTGATG |
Microexon Amino Acid seq | DPDA |
Microexon-tag DNA Seq | CCTTACAGAACTGGTTATCATTTCCAACCTTCCAAGAATTATATGAATGATCCTGATGCGCCTATGATTTACAATGGAATATACCATCTATTCTATCAATGGAGCACT |
Microexon-tag Amino Acid Seq | PYRTGYHFQPSKNYMNDPDAPMIYNGIYHLFYQWST |
Microexon-tag spanning region | 11161733-11162325 |
Microexon-tag prediction score | 0.9124 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | XM_026549709.1x |
Reference Transcript ID | XM_026549709.1 |
Gene ID | NA |
Gene Name | NA |
Transcript ID | XM_026549709.1 |
Protein ID | XP_026405494.1 |
Gene ID | LOC113300508 |
Gene Name | NA |
Pfam domain motif | Glyco_hydro_32N |
Motif E-value | 6.1e-96 |
Motif start | 50 |
Motif end | 370 |
Protein seq | >XP_026405494.1 MNTVLWLIGLCCCSVFISHGVEASHPYYRNFQSFQSSSIPTYQPYRTGYHFQPSKNYMNDPDAPMIYNGIYHLFYQWSTL GAVWGDVVWAHATSTDLVNWIHHKHAIFPSEPFDIEGVWSGSATFVQGKPIIQYTGIIKSNQWNYQVQDMAVPKNLSDPY LVEWVKPVEYNPVIKPTGIINASAFRDPTTGWKGPDGVWRVTIGSKLGNNGISFLFRSDDFIHWTKAEHGLHWAKDTGMW ECPDFFPVAVDGKQGLDTSVLGPKVKHVFKVSLDDTKHDYYTIGTYNLEKDKYTPDKGSIDNDSGLRFDYGKFYASKTFF DNEKNRRVLWGWANESSCVADDIKKGWAGLQAVPRTVWLAENGKQLKQWPVVEIERLRTKKVSLQSQVLKRCSIMEVPGL TASQADVDVKFKLPKLKDVEIMDPSWVNPQLLCSSKPASVQGKSGPFGLLALASNNLEEQTAIFFRVFNHQNKYAVLMCS DQRRSSLEKTNDKTTYGAFIDVDLPHDHMLSLRSLIDRSIVESYGVDGKAVITARVYPKLAIGDEARLYVFNNGTENVKM SSLKAWSMKKAEIKYLKDLEFSDI* |
CDS seq | >XM_026549709.1 ATGAATACTGTTCTATGGTTGATTGGATTGTGTTGTTGTTCTGTTTTCATTAGTCATGGAGTTGAAGCTTCTCATCCCTA TTACAGAAACTTTCAATCTTTTCAATCTAGTAGTATCCCCACTTATCAGCCTTACAGAACTGGTTATCATTTCCAACCTT CCAAGAATTATATGAATGATCCTGATGCGCCTATGATTTACAATGGAATATACCATCTATTCTATCAATGGAGCACTTTA GGTGCAGTTTGGGGTGACGTAGTGTGGGCTCATGCAACATCCACCGATCTCGTAAACTGGATTCATCATAAACACGCGAT TTTCCCATCCGAACCATTTGATATCGAAGGTGTTTGGTCAGGTTCAGCAACATTTGTACAAGGAAAGCCGATTATTCAGT ACACCGGAATTATTAAGTCGAATCAATGGAACTATCAAGTTCAGGACATGGCAGTGCCTAAGAACTTGTCCGATCCTTAC CTTGTGGAATGGGTTAAACCAGTTGAATATAATCCTGTAATCAAACCCACTGGCATTATCAATGCTAGCGCATTTAGGGA TCCGACTACTGGTTGGAAAGGTCCTGATGGAGTCTGGAGAGTGACAATAGGAAGCAAACTAGGCAACAATGGAATATCAT TTTTATTTCGAAGTGATGATTTTATTCATTGGACTAAAGCAGAACATGGTCTTCATTGGGCGAAGGACACTGGAATGTGG GAATGCCCGGATTTTTTTCCAGTAGCAGTTGATGGAAAACAGGGTCTGGATACTTCAGTTCTCGGTCCTAAAGTTAAACA TGTGTTCAAGGTGAGTTTGGATGACACCAAACATGACTATTATACTATTGGGACTTACAACCTGGAAAAGGATAAGTATA CTCCTGACAAGGGATCCATCGACAATGATTCTGGTTTGAGGTTTGATTATGGGAAGTTTTACGCTTCGAAAACATTCTTT GATAATGAAAAGAATCGGAGAGTACTATGGGGTTGGGCAAATGAATCTAGTTGTGTAGCAGATGATATCAAGAAAGGTTG GGCTGGATTACAAGCGGTTCCTCGAACAGTATGGCTTGCGGAAAATGGCAAGCAATTGAAGCAATGGCCTGTTGTAGAAA TTGAACGACTCCGCACCAAAAAAGTTTCTTTACAAAGTCAAGTTCTTAAAAGATGTTCGATAATGGAAGTTCCTGGTCTA ACAGCTTCGCAGGCGGATGTAGATGTTAAATTTAAACTGCCGAAGCTGAAAGATGTAGAAATCATGGACCCTAGTTGGGT TAACCCACAACTACTTTGTAGTTCAAAGCCAGCATCAGTGCAAGGGAAATCAGGGCCATTTGGTTTGCTGGCTTTGGCTT CTAATAACCTTGAAGAACAAACAGCTATTTTCTTCAGAGTATTCAATCATCAAAACAAATATGCTGTGCTCATGTGTAGT GATCAGAGAAGGTCATCTTTGGAAAAAACTAATGACAAAACCACATATGGAGCTTTTATTGATGTTGATCTTCCTCATGA TCACATGCTATCTCTAAGGAGCTTGATTGATCGCTCAATAGTGGAGAGTTATGGTGTTGACGGAAAAGCTGTTATAACAG CTAGAGTGTATCCAAAATTAGCTATTGGTGATGAAGCTCGGCTTTATGTATTCAATAACGGAACTGAAAATGTGAAAATG TCAAGTCTGAAGGCATGGAGTATGAAGAAAGCTGAAATCAAGTATCTTAAAGATTTGGAATTCTCAGATATCTAA |
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