
Microexon ID | Ps_NC_039364.1:11135218-11135226:+ |
Species | Papaver somniferum | Coordinates | NC_039364.1:11135218..11135226 |
Microexon Cluster ID | MEP22 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | Glyco_hydro_32N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | YSKYAMMGRACYGSYTWYCAYTTYCARCCYSMCAARAAYTGGATGAAYGATCCYAAYGGTCCAATGTWYTACAAGGGATKGTACCAYYTSTTCTAYCARTACAAYCCV |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | ATCCTAATG |
Microexon Amino Acid seq | DPNG |
Microexon-tag DNA Seq | CCATATAGAACTGGTTATCATTTCCAACCTTCAAACAATTGGATGAATGATCCTAATGGGCCTATGATTTACAATGGAATATACCATCTGTTCTATCAATGGAGAACT |
Microexon-tag Amino Acid Seq | PYRTGYHFQPSNNWMNDPNGPMIYNGIYHLFYQWRT |
Microexon-tag spanning region | 11134726-11135384 |
Microexon-tag prediction score | 0.9134 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | XM_026542515.1x |
Reference Transcript ID | XM_026542515.1 |
Gene ID | NA |
Gene Name | NA |
Transcript ID | XM_026542515.1 |
Protein ID | XP_026398300.1 |
Gene ID | LOC113294092 |
Gene Name | NA |
Pfam domain motif | Glyco_hydro_32N |
Motif E-value | 2.1e-86 |
Motif start | 34 |
Motif end | 345 |
Protein seq | >XP_026398300.1 MALNNTVNHHGVEASQPFPGNLTQNDQPYRTGYHFQPSNNWMNDPNGPMIYNGIYHLFYQWRTLTGLVWSKKVWAHATST DLVNWIHHKHAIVSSEPFDIESVWSGSTTFVQGKPIIQYTGIIKTVPWKYQVQNMAVPKDLSDPFLIEWIKPVEHNPVIK PDDGINSNAFRDPTTGWQGPDGIWRITIGSKVGNDFIHWIKAEQPLHSVKQTGMWECPDFFPVAIEGNEGVDTSVLGPSV EHVFKVSLEDTSHDYYTIGSYNPETDIYTPDEGSIDNDSGLRFDYGKFYASKTFFDNEKNRRLFRGWVNESSSVTDDVKK GWSGLQALPRTLWLLENGKQLKQWPVEEIKQLRTGRVSLPSKVLAGKSVMEVPGVTASQADVDVIFELPKLEDCDIMDLN WVAKPQLLCSSIPASVRGKSGPFGLLALASKNFEGQTAIFFRVFNHQNKYVVFMCSDQSRSSLEESNDKTTYGAFIDIVP DQDKLCLRSLIDHSIVESFGVEGKAVITARVYPKLATDNEARLYVFNNGTENVKMSSLEAWSMKKAEIKYLENLKISDAR LFFKMDKMGVMGKMGLSNEWDFGVVSGQLVNFIKSSVFFDVNVPPRFCGILSRILKVPHMQADEKHKGCFTNLMDKVQNR LSIHKGKTMSQHRKVTNAEVNDFKLIKRYSYLVGAYEFWFDIATSFSFALYVCPILMAKYNGNCVHEMISKYGCQPDVLN SETVACMSPNGGFTNIAWVLFGKISEREAWCLYGGGADLIFQLKIAKMSDKLIVDESLLVKTNFSRWIYDRGKVL* |
CDS seq | >XM_026542515.1 ATGGCCTTGAATAATACTGTTAATCATCATGGAGTTGAAGCTTCTCAACCTTTTCCTGGGAACCTTACTCAAAATGATCA ACCATATAGAACTGGTTATCATTTCCAACCTTCAAACAATTGGATGAATGATCCTAATGGGCCTATGATTTACAATGGAA TATACCATCTGTTCTATCAATGGAGAACTCTTACTGGTTTAGTTTGGAGTAAAAAAGTATGGGCTCATGCAACATCCACT GATCTCGTAAACTGGATTCACCATAAACATGCGATTGTGTCGTCTGAACCATTTGATATCGAAAGTGTTTGGTCAGGTTC AACAACATTTGTACAAGGAAAGCCGATTATACAGTACACAGGAATCATTAAAACTGTTCCATGGAAATACCAAGTTCAGA ATATGGCAGTGCCTAAGGACTTATCTGATCCTTTCCTTATCGAATGGATCAAACCAGTTGAACATAATCCTGTTATTAAG CCCGATGACGGTATAAATTCTAATGCATTTAGGGATCCTACTACTGGTTGGCAAGGTCCTGATGGAATCTGGAGAATTAC AATAGGAAGCAAAGTAGGCAATGATTTTATTCATTGGATTAAAGCTGAACAACCTCTTCACTCGGTGAAGCAAACTGGAA TGTGGGAATGCCCGGATTTCTTTCCAGTAGCAATTGAAGGTAATGAGGGTGTGGATACTTCAGTTCTTGGTCCTAGTGTT GAACATGTGTTCAAGGTGAGCTTGGAGGATACCAGTCATGATTACTATACTATTGGGTCTTATAACCCTGAAACAGATAT ATATACTCCTGATGAAGGATCCATCGATAATGATTCTGGTTTGAGGTTTGATTACGGGAAGTTTTACGCTTCAAAAACAT TCTTCGATAATGAAAAGAACAGGAGACTATTTCGGGGTTGGGTAAATGAATCTAGTAGTGTAACAGATGATGTGAAGAAA GGTTGGTCCGGACTACAGGCGCTTCCCCGAACTCTATGGCTCTTGGAAAATGGAAAGCAATTGAAGCAATGGCCTGTTGA AGAGATAAAACAACTTCGCACAGGACGAGTTTCTTTACCTAGCAAAGTTCTTGCAGGGAAGTCAGTAATGGAAGTTCCTG GTGTCACAGCTTCACAGGCAGATGTAGATGTAATATTTGAACTTCCAAAGTTAGAAGATTGTGATATCATGGACCTTAAT TGGGTCGCTAAACCGCAACTACTTTGTAGTTCAATACCAGCATCAGTACGTGGGAAATCAGGGCCATTTGGTTTGTTGGC TTTGGCTTCTAAGAACTTTGAAGGACAGACAGCCATTTTCTTCAGAGTATTCAATCATCAAAACAAATATGTTGTGTTCA TGTGCAGTGATCAGAGCCGGTCTTCTTTGGAAGAAAGCAACGACAAAACAACTTATGGAGCTTTTATTGATATTGTCCCT GATCAAGATAAGCTATGTCTAAGGAGCTTGATTGATCACTCAATCGTGGAGAGTTTTGGGGTCGAAGGAAAAGCTGTTAT AACAGCTAGAGTATATCCAAAATTGGCTACTGATAATGAAGCTCGGCTTTATGTATTCAATAATGGTACTGAAAATGTGA AGATGTCTAGTCTCGAGGCATGGAGTATGAAGAAAGCTGAAATCAAATATCTTGAAAACCTGAAAATTTCTGATGCAAGA TTATTTTTCAAGATGGACAAAATGGGTGTTATGGGTAAAATGGGCTTAAGCAATGAATGGGATTTTGGTGTTGTTTCTGG CCAATTGGTGAATTTCATAAAATCAAGTGTTTTCTTCGATGTTAATGTCCCACCAAGGTTTTGCGGAATCTTGTCTAGAA TATTAAAGGTGCCTCATATGCAAGCAGATGAAAAACATAAAGGATGTTTTACTAATCTTATGGATAAGGTGCAAAACAGA TTATCCATACACAAGGGTAAAACAATGTCACAACATAGAAAGGTTACAAATGCTGAGGTAAATGATTTCAAACTCATTAA GAGGTATTCCTATTTAGTTGGTGCATATGAATTCTGGTTTGATATAGCTACTTCCTTCTCGTTTGCACTATATGTATGTC CAATATTGATGGCCAAATACAATGGCAATTGTGTTCATGAGATGATTAGCAAATATGGATGTCAACCAGATGTGTTGAAT AGTGAAACAGTTGCTTGTATGTCACCTAATGGTGGTTTTACTAATATTGCTTGGGTGTTATTTGGTAAAATTTCTGAGAG AGAAGCTTGGTGTCTGTATGGTGGTGGAGCTGATTTAATCTTTCAACTTAAAATTGCTAAAATGAGTGACAAGTTGATCG TTGATGAAAGTCTGCTTGTTAAAACCAATTTTTCTCGTTGGATATACGATCGTGGCAAAGTGTTGTAA |
Ps_NC_039364.1:11135218-11135226:+ does not have available information here.