
Microexon ID | Pp_23:10744713-10744721:- |
Species | Physcomitrium patens | Coordinates | 23:10744713..10744721 |
Microexon Cluster ID | MEP22 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | Glyco_hydro_32N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | YSKYAMMGRACYGSYTWYCAYTTYCARCCYSMCAARAAYTGGATGAAYGATCCYAAYGGTCCAATGTWYTACAAGGGATKGTACCAYYTSTTCTAYCARTACAAYCCV |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | ACCCAAATG |
Microexon Amino Acid seq | DPNG |
Microexon-tag DNA Seq | CCTTACCGGTCATCATATCATTTCCAACCTCCCAAAAACTGGATGAATGACCCAAATGGACCAATGTACTACGAAGGCTTTTATCACTTATTCTACCAGTACAATCCC |
Microexon-tag Amino Acid Seq | PYRSSYHFQPPKNWMNDPNGPMYYEGFYHLFYQYNP |
Microexon-tag spanning region | 10744502-10745057 |
Microexon-tag prediction score | 0.9456 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | Pp3c23_16290V3.2x |
Reference Transcript ID | Pp3c23_16290V3.2 |
Gene ID | Pp3c23_16290 |
Gene Name | NA |
Transcript ID | Pp3c23_16290V3.2 |
Protein ID | Pp3c23_16290V3.2 |
Gene ID | Pp3c23_16290 |
Gene Name | NA |
Pfam domain motif | Glyco_hydro_32N |
Motif E-value | 2.3e-103 |
Motif start | 114 |
Motif end | 432 |
Protein seq | >Pp3c23_16290V3.2 MYLPCSTKSQFNAVHYHAQREDNSCNLVSVPMLDETSQEGYGLYREVFASRNKKKSAIAFLTIMLIAVVLYTSKIVAPKW LELFQREKQYLVRDIVRNSAITSCHSQPYRSSYHFQPPKNWMNDPNGPMYYEGFYHLFYQYNPGGAVWGNLTWGHAVSTD LIHWRDLEPALKPDEWYDNGGVWSGSVTICPDGSPLILYTGVADDLEQSQNLAVPEDLADPLLRKWVKSRENPILRHPVG IDKEDFRDPTTAWQVNDGTWRILVGAKMGRDGMALLYKSEDLRHWELDENVLHTVPGSGMWECLDFFPIAPFGREGLDTS VNGPHVKHVLKASMYDDQHDHYAVGTYNLSTESFTPINHALDIQHGLHYDYGKFYASKSFYDPVKKRRIVWGWSNESDSA AQDIARGWASLQAIPRVLWLDTALGDSLIQAPIEEVDDLRVGKVSKTDVDLEAGSVIKIEGSSGGQVVLLDIEVIFEYPN VSNVIVQDYGFLNGPFDCGNGGSAQRGVYGPFGLLVLTDDAYQEQTAVFFYIAQDANQRWVTHFCSDQSRSSLLHDIDTT AFWSDVRVLPTENFLSLRVLVDHSIVESFVQGGRMAITSRVYPKEAVDEKAHVFLFNNSTTQITVRSINVWQMRSITVLP LA* |
CDS seq | >Pp3c23_16290V3.2 ATGTACTTACCATGTAGCACGAAGTCGCAATTCAACGCGGTGCATTATCATGCTCAGAGGGAAGATAATTCTTGCAATTT GGTCTCCGTTCCGATGTTAGATGAAACATCGCAGGAGGGCTATGGCTTGTACCGGGAAGTTTTTGCATCCAGGAACAAGA AAAAGAGTGCAATTGCTTTCCTCACAATTATGTTGATAGCAGTAGTATTGTACACGAGCAAAATTGTTGCTCCCAAATGG CTGGAGCTCTTCCAAAGGGAGAAACAGTATCTTGTACGTGATATTGTCAGAAACAGTGCTATTACGAGCTGTCATTCTCA GCCTTACCGGTCATCATATCATTTCCAACCTCCCAAAAACTGGATGAATGACCCAAATGGACCAATGTACTACGAAGGCT TTTATCACTTATTCTACCAGTACAATCCCGGAGGAGCTGTGTGGGGCAACCTTACTTGGGGTCATGCCGTCTCCACAGAC CTTATCCATTGGCGTGATCTTGAGCCTGCCTTGAAACCTGACGAATGGTATGACAATGGAGGCGTATGGTCTGGTTCAGT CACTATCTGTCCAGACGGATCACCGTTGATTCTATACACAGGTGTAGCAGATGATCTTGAGCAGTCACAGAACTTGGCGG TACCCGAAGATCTTGCTGATCCTCTTCTTCGCAAGTGGGTGAAAAGTCGAGAGAATCCAATTCTTCGACACCCTGTTGGA ATTGATAAAGAGGACTTCAGGGATCCAACAACAGCTTGGCAGGTAAATGATGGCACGTGGAGAATACTAGTTGGAGCCAA AATGGGGAGAGATGGAATGGCGTTGCTTTATAAGAGCGAAGACCTACGTCATTGGGAGCTAGATGAAAATGTGCTGCACA CAGTTCCTGGCTCGGGAATGTGGGAATGCTTGGACTTCTTTCCTATTGCACCGTTTGGACGAGAAGGGTTGGACACGTCA GTCAATGGGCCTCATGTCAAACATGTCTTGAAAGCGAGCATGTATGATGATCAGCACGATCATTATGCAGTGGGTACTTA TAATTTGTCTACAGAATCGTTCACACCTATCAATCATGCTTTGGACATCCAGCACGGCTTGCATTATGACTACGGGAAGT TTTATGCTTCGAAGTCTTTCTATGACCCAGTGAAGAAGCGTCGCATCGTGTGGGGTTGGTCTAATGAATCCGACAGTGCA GCTCAAGATATTGCTAGAGGATGGGCATCACTCCAGGCAATACCGAGGGTGTTGTGGTTGGACACTGCATTAGGAGACAG CTTAATACAGGCACCTATCGAGGAGGTCGATGATTTGAGGGTCGGCAAGGTTTCCAAAACAGATGTGGATTTGGAGGCAG GCAGTGTCATCAAAATCGAGGGATCCTCTGGAGGCCAGGTGGTTTTGCTGGATATTGAAGTCATATTTGAGTACCCCAAT GTCTCCAACGTGATAGTTCAAGATTATGGTTTCCTGAATGGACCATTTGACTGTGGTAATGGAGGATCAGCCCAGCGAGG TGTATATGGCCCATTTGGATTGCTGGTGCTCACAGATGACGCTTACCAAGAGCAAACTGCTGTATTTTTCTACATCGCCC AGGACGCCAATCAGCGTTGGGTCACGCACTTTTGCAGTGATCAGAGCAGATCTTCTCTTTTGCATGATATTGACACAACT GCGTTTTGGAGTGATGTTCGCGTCTTGCCTACTGAGAACTTTCTGTCTCTGCGTGTCCTGGTGGATCACTCTATCGTTGA AAGTTTTGTTCAAGGTGGACGAATGGCTATAACATCGCGTGTTTATCCTAAAGAAGCGGTGGACGAGAAAGCTCATGTAT TCCTCTTCAACAACAGCACAACGCAGATTACAGTTCGCAGCATCAATGTCTGGCAGATGCGGAGTATTACCGTACTCCCC CTTGCATGA |
Microexon DNA seq | ACCCAAATG |
Microexon Amino Acid seq | DPNG |
Microexon-tag DNA Seq | CCTTACCGGTCATCATATCATTTCCAACCTCCCAAAAACTGGATGAATGACCCAAATGGACCAATGTACTACGAAGGCTTTTATCACTTATTCTACCAGTACAATCCC |
Microexon-tag Amino Acid seq | PYRSSYHFQPPKNWMNDPNGPMYYEGFYHLFYQYNP |
Transcript ID | Pp.15272.1 |
Gene ID | Pp.15272 |
Gene Name | NA |
Pfam domain motif | Glyco_hydro_32N |
Motif E-value | 2.3e-103 |
Motif start | 114 |
Motif end | 432 |
Protein seq | >Pp.15272.1 MYLPCSTKSQFNAVHYHAQREDNSCNLVSVPMLDETSQEGYGLYREVFASRNKKKSAIAFLTIMLIAVVLYTSKIVAPKW LELFQREKQYLVRDIVRNSAITSCHSQPYRSSYHFQPPKNWMNDPNGPMYYEGFYHLFYQYNPGGAVWGNLTWGHAVSTD LIHWRDLEPALKPDEWYDNGGVWSGSVTICPDGSPLILYTGVADDLEQSQNLAVPEDLADPLLRKWVKSRENPILRHPVG IDKEDFRDPTTAWQVNDGTWRILVGAKMGRDGMALLYKSEDLRHWELDENVLHTVPGSGMWECLDFFPIAPFGREGLDTS VNGPHVKHVLKASMYDDQHDHYAVGTYNLSTESFTPINHALDIQHGLHYDYGKFYASKSFYDPVKKRRIVWGWSNESDSA AQDIARGWASLQAIPRVLWLDTALGDSLIQAPIEEVDDLRVGKVSKTDVDLEAGSVIKIEGSSGGQLDIEVIFEYPNVSN VIVQDYGFLNGPFDCGNGGSAQRGVYGPFGLLVLTDDAYQEQTAVFFYIAQDANQRWVTHFCSDQSRSSLLHDIDTTAFW SDVRVLPTENFLSLRVLVDHSIVESFVQGGRMAITSRVYPKEAVDEKAHVFLFNNSTTQITVRSINVWQMRSITVLPLA* |
CDS seq | >Pp.15272.1 ATGTACTTACCATGTAGCACGAAGTCGCAATTCAACGCGGTGCATTATCATGCTCAGAGGGAAGATAATTCTTGCAATTT GGTCTCCGTTCCGATGTTAGATGAAACATCGCAGGAGGGCTATGGCTTGTACCGGGAAGTTTTTGCATCCAGGAACAAGA AAAAGAGTGCAATTGCTTTCCTCACAATTATGTTGATAGCAGTAGTATTGTACACGAGCAAAATTGTTGCTCCCAAATGG CTGGAGCTCTTCCAAAGGGAGAAACAGTATCTTGTACGTGATATTGTCAGAAACAGTGCTATTACGAGCTGTCATTCTCA GCCTTACCGGTCATCATATCATTTCCAACCTCCCAAAAACTGGATGAATGACCCAAATGGACCAATGTACTACGAAGGCT TTTATCACTTATTCTACCAGTACAATCCCGGAGGAGCTGTGTGGGGCAACCTTACTTGGGGTCATGCCGTCTCCACAGAC CTTATCCATTGGCGTGATCTTGAGCCTGCCTTGAAACCTGACGAATGGTATGACAATGGAGGCGTATGGTCTGGTTCAGT CACTATCTGTCCAGACGGATCACCGTTGATTCTATACACAGGTGTAGCAGATGATCTTGAGCAGTCACAGAACTTGGCGG TACCCGAAGATCTTGCTGATCCTCTTCTTCGCAAGTGGGTGAAAAGTCGAGAGAATCCAATTCTTCGACACCCTGTTGGA ATTGATAAAGAGGACTTCAGGGATCCAACAACAGCTTGGCAGGTAAATGATGGCACGTGGAGAATACTAGTTGGAGCCAA AATGGGGAGAGATGGAATGGCGTTGCTTTATAAGAGCGAAGACCTACGTCATTGGGAGCTAGATGAAAATGTGCTGCACA CAGTTCCTGGCTCGGGAATGTGGGAATGCTTGGACTTCTTTCCTATTGCACCGTTTGGACGAGAAGGGTTGGACACGTCA GTCAATGGGCCTCATGTCAAACATGTCTTGAAAGCGAGCATGTATGATGATCAGCACGATCATTATGCAGTGGGTACTTA TAATTTGTCTACAGAATCGTTCACACCTATCAATCATGCTTTGGACATCCAGCACGGCTTGCATTATGACTACGGGAAGT TTTATGCTTCGAAGTCTTTCTATGACCCAGTGAAGAAGCGTCGCATCGTGTGGGGTTGGTCTAATGAATCCGACAGTGCA GCTCAAGATATTGCTAGAGGATGGGCATCACTCCAGGCAATACCGAGGGTGTTGTGGTTGGACACTGCATTAGGAGACAG CTTAATACAGGCACCTATCGAGGAGGTCGATGATTTGAGGGTCGGCAAGGTTTCCAAAACAGATGTGGATTTGGAGGCAG GCAGTGTCATCAAAATCGAGGGATCCTCTGGAGGCCAGCTGGATATTGAAGTCATATTTGAGTACCCCAATGTCTCCAAC GTGATAGTTCAAGATTATGGTTTCCTGAATGGACCATTTGACTGTGGTAATGGAGGATCAGCCCAGCGAGGTGTATATGG CCCATTTGGATTGCTGGTGCTCACAGATGACGCTTACCAAGAGCAAACTGCTGTATTTTTCTACATCGCCCAGGACGCCA ATCAGCGTTGGGTCACGCACTTTTGCAGTGATCAGAGCAGATCTTCTCTTTTGCATGATATTGACACAACTGCGTTTTGG AGTGATGTTCGCGTCTTGCCTACTGAGAACTTTCTGTCTCTGCGTGTCCTGGTGGATCACTCTATCGTTGAAAGTTTTGT TCAAGGTGGACGAATGGCTATAACATCGCGTGTTTATCCTAAAGAAGCGGTGGACGAGAAAGCTCATGTATTCCTCTTCA ACAACAGCACAACGCAGATTACAGTTCGCAGCATCAATGTCTGGCAGATGCGGAGTATTACCGTACTCCCCCTTGCATGA |