
Microexon ID | Os_9:4191204-4191212:+ |
Species | Oryza sativa | Coordinates | 9:4191204..4191212 |
Microexon Cluster ID | MEP22 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | Glyco_hydro_32N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | YSKYAMMGRACYGSYTWYCAYTTYCARCCYSMCAARAAYTGGATGAAYGATCCYAAYGGTCCAATGTWYTACAAGGGATKGTACCAYYTSTTCTAYCARTACAAYCCV |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | ATCCGAATG |
Microexon Amino Acid seq | DPNG |
Microexon-tag DNA Seq | GGCAGAAGAACTGCTTATCACTTCCAGCCTGCAAAGAACTGGCAGAATGATCCGAATGGGCCTTTGTACCATAACGGTATGTACCATTTGTTCTACAAGTACAACCCG |
Microexon-tag Amino Acid Seq | GRRTAYHFQPAKNWQNDPNGPLYHNGMYHLFYKYNP |
Microexon-tag spanning region | 4190997-4197307 |
Microexon-tag prediction score | 0.9397 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | Os09t0255300-00x |
Reference Transcript ID | Os09t0255300-00 |
Gene ID | Os09g0255300 |
Gene Name | NA |
Transcript ID | Os09t0255300-00 |
Protein ID | Os09t0255300-00 |
Gene ID | Os09g0255300 |
Gene Name | NA |
Pfam domain motif | Glyco_hydro_32N |
Motif E-value | 5.1e-80 |
Motif start | 44 |
Motif end | 323 |
Protein seq | >Os09t0255300-00 MARLGLAVCAVSFHLCLLLSSTSSLRLNPTTEDTANHGRRTAYHFQPAKNWQNDPNGPLYHNGMYHLFYKYNPHSALWDI GNLSWGHFVSGDLLNWAALDTALDPTSPFDANGCWSGSATILPGGLPAILYTGIDAGKEQVQNVAFAKNPSDPLLREWEK PAYNPVIALPPDVPGDNFRDPSTAWLGRDGLWRIAVSAEVDGVASTLVYRSEDFVRWERNAAPLHASRAAGMVECPDMFP VAENGEDGLDTSTNGAGGVRHVLKLSVMDTLQDYYMVGTYDDAADAFSPAEPERGDDCRRWRRLDYGHTFPRKMWIAKDG KQLLQWPIEEIETLRRKRAAGLRRGTRLGAGAVQEIVGVASSQADVEVIDHSVVESFGGGGRACITARVYPEHVATSSSH LYVFNNGSDDVKVAKLEAWDLATATVNVVVGDHHGLAAPALELEPTRTTQ* |
CDS seq | >Os09t0255300-00 ATGGCGAGATTAGGTCTTGCCGTGTGCGCCGTCTCCTTCCACCTCTGCCTTCTTCTGTCGTCGACCTCCTCGCTCCGGCT AAACCCCACGACGGAGGACACAGCCAACCATGGCAGAAGAACTGCTTATCACTTCCAGCCTGCAAAGAACTGGCAGAATG ATCCGAATGGGCCTTTGTACCATAACGGTATGTACCATTTGTTCTACAAGTACAACCCGCATAGCGCGCTCTGGGACATC GGCAACCTCTCCTGGGGCCACTTTGTCTCCGGCGACCTCCTCAACTGGGCCGCTCTCGACACCGCGCTCGACCCCACCTC GCCTTTTGACGCCAATGGCTGCTGGTCGGGCTCCGCCACCATCCTCCCCGGCGGCCTCCCGGCCATCCTCTACACCGGCA TTGACGCCGGCAAGGAGCAGGTGCAGAACGTCGCCTTCGCCAAGAACCCCTCCGATCCGCTCCTCCGTGAGTGGGAGAAG CCCGCGTACAATCCGGTCATCGCGCTCCCGCCCGACGTCCCCGGCGACAACTTCCGCGACCCCTCGACGGCGTGGCTCGG GCGCGATGGCCTGTGGCGGATCGCCGTCTCCGCCGAGGTGGACGGCGTGGCGTCCACGCTCGTCTACAGGAGCGAGGACT TCGTCCGGTGGGAGCGGAACGCCGCGCCGCTGCACGCGTCGCGCGCCGCCGGCATGGTGGAGTGCCCGGACATGTTCCCC GTGGCGGAGAACGGCGAGGATGGCCTCGACACGTCGACGAACGGCGCCGGCGGCGTGCGCCACGTCCTGAAGCTGAGCGT GATGGACACGCTCCAGGACTACTACATGGTCGGCACGTACGACGACGCGGCGGACGCCTTCTCGCCGGCGGAGCCCGAGC GCGGCGACGACTGCCGGAGATGGCGGCGGCTGGACTACGGCCACACGTTCCCGAGGAAGATGTGGATCGCCAAGGACGGC AAGCAGCTGCTGCAGTGGCCAATCGAGGAGATCGAGACGCTGAGGAGGAAGCGCGCCGCCGGTCTCCGGCGAGGCACCAG GCTAGGCGCCGGCGCGGTGCAGGAGATCGTCGGCGTGGCGAGCTCGCAGGCGGACGTGGAGGTGATTGACCATTCGGTGG TGGAGAGCTTCGGCGGCGGCGGGCGGGCGTGCATCACGGCGCGGGTTTACCCGGAGCACGTGGCGACGAGCAGCAGCCAT TTGTACGTGTTCAACAACGGGAGCGACGACGTTAAGGTGGCCAAGCTGGAGGCGTGGGACCTGGCGACGGCGACCGTCAA CGTTGTTGTTGGAGACCACCACGGCCTTGCTGCGCCGGCGTTGGAGTTGGAGCCGACACGTACGACGCAGTGA |
Os_9:4191204-4191212:+ does not have available information here.