
Microexon ID | Os_4:33943054-33943062:- |
Species | Oryza sativa | Coordinates | 4:33943054..33943062 |
Microexon Cluster ID | MEP22 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | Glyco_hydro_32N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | YSKYAMMGRACYGSYTWYCAYTTYCARCCYSMCAARAAYTGGATGAAYGATCCYAAYGGTCCAATGTWYTACAAGGGATKGTACCAYYTSTTCTAYCARTACAAYCCV |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | ATCCGAATG |
Microexon Amino Acid seq | DPNG |
Microexon-tag DNA Seq | CGTGACCGAACGGCGTACCACTTCCAACCCGCCAAGAACTGGCAGAACGATCCGAATGGGCCTGTGTACTACAATGGCATGTACCACCTCTTCTACCAGTACAACCCG |
Microexon-tag Amino Acid Seq | RDRTAYHFQPAKNWQNDPNGPVYYNGMYHLFYQYNP |
Microexon-tag spanning region | 33942892-33943256 |
Microexon-tag prediction score | 0.9698 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | Os04t0664800-00x |
Reference Transcript ID | Os04t0664800-00 |
Gene ID | Os04g0664800 |
Gene Name | OsCIN6 |
Transcript ID | Os04t0664800-00 |
Protein ID | Os04t0664800-00 |
Gene ID | Os04g0664800 |
Gene Name | OsCIN6 |
Pfam domain motif | Glyco_hydro_32N |
Motif E-value | 2.1e-101 |
Motif start | 42 |
Motif end | 371 |
Protein seq | >Os04t0664800-00 MALAGLPLSVFAIAVHFCLVFSSSSSPPVCPANGHRDRTAYHFQPAKNWQNDPNGPVYYNGMYHLFYQYNPHGALWDVGN LSWGHSVSGDLVNWAALDNALDPTAPFDANGCASGSVTILPDGVPVVMYSGIDARRRQVQNVAFPKNPRDPLLREWTKPG YNPVIPVPADVSPDNFRDPTTAWLGSDGLWRFAISAVADGVGATLVYRSADFLRWERNAAPLHASRDAVMAECPDLFPVA EHGEDGLDLDASAIGGAGAGVRHVLKVSMPDTLEDYYMVGRYDDADDTFTVPPEDLEAHGDDYRRWRRIDHGHLYASKTF YDAGKKRRVLWAWVNESDSEADDVTKGWSGLQSFPRAVWLDEGGRQLVQWPVEEIETLRRKRGVLLGGNEVEAGGLREIG GIAGSQADVEVAFEIASLAGADRLEPDHLRDPDALCGENGAAVHGGIGPFGLLVMASGDLRERTAVFFRVFRLSHGYTVL MCTDLTRSTSRAGVYKPSHGGFVDIDIEKDRAISLRTLIDHSIVESFGGGGRTCMTARVYPEHVATGSSHLYVFNNASDA VKVSKLEAWELATASVNAGDDGLISYGGPVCAAQVQ* |
CDS seq | >Os04t0664800-00 ATGGCGTTGGCTGGATTGCCCCTCTCCGTCTTTGCCATCGCTGTCCATTTTTGCCTTGTTTTCTCCTCCTCCTCTTCTCC TCCGGTTTGCCCTGCAAACGGCCACCGTGACCGAACGGCGTACCACTTCCAACCCGCCAAGAACTGGCAGAACGATCCGA ATGGGCCTGTGTACTACAATGGCATGTACCACCTCTTCTACCAGTACAACCCGCACGGCGCGCTCTGGGACGTCGGCAAC CTCTCCTGGGGGCACTCCGTCTCCGGCGACCTCGTGAACTGGGCCGCCCTCGACAACGCGCTCGATCCCACAGCGCCATT CGACGCCAATGGTTGCGCGTCGGGGTCAGTCACCATCCTCCCCGACGGCGTGCCCGTCGTCATGTACTCCGGCATCGACG CCCGCCGCCGGCAGGTCCAGAACGTCGCGTTCCCCAAGAACCCTCGCGACCCGCTCCTCCGCGAGTGGACCAAGCCCGGG TACAACCCGGTCATCCCTGTCCCCGCCGACGTCTCGCCGGACAATTTCCGGGACCCCACCACCGCCTGGCTCGGCAGCGA CGGCCTGTGGCGGTTCGCCATCTCCGCCGTGGCCGACGGCGTGGGCGCGACGCTCGTGTACCGGAGCGCCGACTTCCTGC GGTGGGAGCGCAACGCGGCGCCGCTGCACGCCTCGCGGGACGCGGTCATGGCCGAGTGCCCCGACCTGTTCCCCGTCGCC GAGCACGGCGAGGACGGGCTCGACCTCGACGCGTCGGCGATCGGCGGCGCCGGCGCCGGCGTGAGGCACGTCCTCAAGGT CAGCATGCCGGACACCCTCGAGGACTACTACATGGTCGGACGGTACGACGACGCGGACGACACGTTCACCGTGCCGCCGG AGGACCTGGAAGCCCACGGCGATGACTACCGGCGGTGGCGGCGGATCGACCACGGCCACCTGTACGCGTCCAAGACGTTC TACGACGCGGGCAAGAAACGGCGCGTGCTGTGGGCGTGGGTGAACGAGTCCGACAGCGAGGCCGACGACGTCACCAAGGG CTGGTCCGGCCTTCAGTCGTTTCCGCGGGCGGTGTGGCTGGACGAGGGCGGGAGGCAGCTGGTGCAGTGGCCGGTGGAGG AGATCGAGACGCTGAGGCGGAAACGCGGCGTTCTGCTCGGCGGAAACGAGGTGGAGGCGGGCGGGCTGCGCGAGATCGGC GGCATCGCGGGCTCGCAGGCGGACGTGGAGGTAGCGTTCGAGATCGCGAGCCTCGCGGGCGCCGACCGCCTCGAGCCCGA CCATTTGCGTGACCCCGACGCGCTGTGCGGGGAGAATGGCGCGGCGGTGCACGGCGGAATCGGCCCGTTCGGGCTGCTCG TCATGGCATCCGGCGACCTGCGCGAGCGCACCGCCGTTTTCTTCAGGGTGTTCAGGCTCTCGCACGGGTACACGGTCCTC ATGTGCACGGACCTGACACGGTCAACTTCAAGAGCAGGGGTGTACAAGCCATCCCACGGAGGATTCGTGGACATAGACAT AGAGAAGGACAGGGCTATATCGCTTCGAACCCTGATCGATCATTCGATCGTGGAGAGTTTTGGCGGTGGGGGGCGGACGT GCATGACGGCTCGAGTGTACCCTGAACATGTAGCAACGGGGAGCAGCCACCTGTACGTGTTCAACAATGCGTCAGATGCG GTGAAGGTGTCCAAGCTGGAGGCATGGGAGCTCGCGACGGCTAGTGTCAATGCTGGAGACGACGGGCTGATTTCGTATGG TGGTCCTGTATGTGCTGCTCAAGTGCAGTAA |
Microexon DNA seq | ATCCGAATG |
Microexon Amino Acid seq | DPNG |
Microexon-tag DNA Seq | CGTGACCGAACGGCGTACCACTTCCAACCCGCCAAGAACTGGCAGAACGATCCGAATGGGCCTGTGTACTACAATGGCATGTACCACCTCTTCTACCAGTACAACCCG |
Microexon-tag Amino Acid seq | RDRTAYHFQPAKNWQNDPNGPVYYNGMYHLFYQYNP |
Transcript ID | Os04t0664800-00 |
Gene ID | Os.24503 |
Gene Name | OsCIN6 |
Pfam domain motif | Glyco_hydro_32N |
Motif E-value | 2.1e-101 |
Motif start | 42 |
Motif end | 371 |
Protein seq | >Os04t0664800-00 MALAGLPLSVFAIAVHFCLVFSSSSSPPVCPANGHRDRTAYHFQPAKNWQNDPNGPVYYNGMYHLFYQYNPHGALWDVGN LSWGHSVSGDLVNWAALDNALDPTAPFDANGCASGSVTILPDGVPVVMYSGIDARRRQVQNVAFPKNPRDPLLREWTKPG YNPVIPVPADVSPDNFRDPTTAWLGSDGLWRFAISAVADGVGATLVYRSADFLRWERNAAPLHASRDAVMAECPDLFPVA EHGEDGLDLDASAIGGAGAGVRHVLKVSMPDTLEDYYMVGRYDDADDTFTVPPEDLEAHGDDYRRWRRIDHGHLYASKTF YDAGKKRRVLWAWVNESDSEADDVTKGWSGLQSFPRAVWLDEGGRQLVQWPVEEIETLRRKRGVLLGGNEVEAGGLREIG GIAGSQADVEVAFEIASLAGADRLEPDHLRDPDALCGENGAAVHGGIGPFGLLVMASGDLRERTAVFFRVFRLSHGYTVL MCTDLTRSTSRAGVYKPSHGGFVDIDIEKDRAISLRTLIDHSIVESFGGGGRTCMTARVYPEHVATGSSHLYVFNNASDA VKVSKLEAWELATASVNAGDDGLISYGGPVCAAQVQ* |
CDS seq | >Os04t0664800-00 ATGGCGTTGGCTGGATTGCCCCTCTCCGTCTTTGCCATCGCTGTCCATTTTTGCCTTGTTTTCTCCTCCTCCTCTTCTCC TCCGGTTTGCCCTGCAAACGGCCACCGTGACCGAACGGCGTACCACTTCCAACCCGCCAAGAACTGGCAGAACGATCCGA ATGGGCCTGTGTACTACAATGGCATGTACCACCTCTTCTACCAGTACAACCCGCACGGCGCGCTCTGGGACGTCGGCAAC CTCTCCTGGGGGCACTCCGTCTCCGGCGACCTCGTGAACTGGGCCGCCCTCGACAACGCGCTCGATCCCACAGCGCCATT CGACGCCAATGGTTGCGCGTCGGGGTCAGTCACCATCCTCCCCGACGGCGTGCCCGTCGTCATGTACTCCGGCATCGACG CCCGCCGCCGGCAGGTCCAGAACGTCGCGTTCCCCAAGAACCCTCGCGACCCGCTCCTCCGCGAGTGGACCAAGCCCGGG TACAACCCGGTCATCCCTGTCCCCGCCGACGTCTCGCCGGACAATTTCCGGGACCCCACCACCGCCTGGCTCGGCAGCGA CGGCCTGTGGCGGTTCGCCATCTCCGCCGTGGCCGACGGCGTGGGCGCGACGCTCGTGTACCGGAGCGCCGACTTCCTGC GGTGGGAGCGCAACGCGGCGCCGCTGCACGCCTCGCGGGACGCGGTCATGGCCGAGTGCCCCGACCTGTTCCCCGTCGCC GAGCACGGCGAGGACGGGCTCGACCTCGACGCGTCGGCGATCGGCGGCGCCGGCGCCGGCGTGAGGCACGTCCTCAAGGT CAGCATGCCGGACACCCTCGAGGACTACTACATGGTCGGACGGTACGACGACGCGGACGACACGTTCACCGTGCCGCCGG AGGACCTGGAAGCCCACGGCGATGACTACCGGCGGTGGCGGCGGATCGACCACGGCCACCTGTACGCGTCCAAGACGTTC TACGACGCGGGCAAGAAACGGCGCGTGCTGTGGGCGTGGGTGAACGAGTCCGACAGCGAGGCCGACGACGTCACCAAGGG CTGGTCCGGCCTTCAGTCGTTTCCGCGGGCGGTGTGGCTGGACGAGGGCGGGAGGCAGCTGGTGCAGTGGCCGGTGGAGG AGATCGAGACGCTGAGGCGGAAACGCGGCGTTCTGCTCGGCGGAAACGAGGTGGAGGCGGGCGGGCTGCGCGAGATCGGC GGCATCGCGGGCTCGCAGGCGGACGTGGAGGTAGCGTTCGAGATCGCGAGCCTCGCGGGCGCCGACCGCCTCGAGCCCGA CCATTTGCGTGACCCCGACGCGCTGTGCGGGGAGAATGGCGCGGCGGTGCACGGCGGAATCGGCCCGTTCGGGCTGCTCG TCATGGCATCCGGCGACCTGCGCGAGCGCACCGCCGTTTTCTTCAGGGTGTTCAGGCTCTCGCACGGGTACACGGTCCTC ATGTGCACGGACCTGACACGGTCAACTTCAAGAGCAGGGGTGTACAAGCCATCCCACGGAGGATTCGTGGACATAGACAT AGAGAAGGACAGGGCTATATCGCTTCGAACCCTGATCGATCATTCGATCGTGGAGAGTTTTGGCGGTGGGGGGCGGACGT GCATGACGGCTCGAGTGTACCCTGAACATGTAGCAACGGGGAGCAGCCACCTGTACGTGTTCAACAATGCGTCAGATGCG GTGAAGGTGTCCAAGCTGGAGGCATGGGAGCTCGCGACGGCTAGTGTCAATGCTGGAGACGACGGGCTGATTTCGTATGG TGGTCCTGTATGTGCTGCTCAAGTGCAGTAA |