
Microexon ID | Os_4:20423070-20423078:+ |
Species | Oryza sativa | Coordinates | 4:20423070..20423078 |
Microexon Cluster ID | MEP22 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | Glyco_hydro_32N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | YSKYAMMGRACYGSYTWYCAYTTYCARCCYSMCAARAAYTGGATGAAYGATCCYAAYGGTCCAATGTWYTACAAGGGATKGTACCAYYTSTTCTAYCARTACAAYCCV |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | ATCCGAACG |
Microexon Amino Acid seq | DPNA |
Microexon-tag DNA Seq | GAGCTCCGGACTGGGTATCACTTCCAGCCACCCAAGAACTGGATCAATGATCCGAACGCGCCGATGTACTACAAGGGGTGGTACCATCTGTTCTACCAGTACAACCCC |
Microexon-tag Amino Acid Seq | ELRTGYHFQPPKNWINDPNAPMYYKGWYHLFYQYNP |
Microexon-tag spanning region | 20422378-20423615 |
Microexon-tag prediction score | 0.97 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | Os04t0413500-01x |
Reference Transcript ID | Os04t0413500-01 |
Gene ID | Os04g0413500 |
Gene Name | GIF1 |
Transcript ID | Os04t0413500-01 |
Protein ID | Os04t0413500-01 |
Gene ID | Os04g0413500 |
Gene Name | GIF1 |
Pfam domain motif | Glyco_hydro_32N |
Motif E-value | 4.5e-104 |
Motif start | 59 |
Motif end | 384 |
Protein seq | >Os04t0413500-01 MGVLGSRVAWAWLVQLLLLQQLAGASHVVYDDLELQAAATTADGVPPSIVDSELRTGYHFQPPKNWINDPNAPMYYKGWY HLFYQYNPKGAVWGNIVWAHSVSRDLINWVALKPAIEPSIRADKYGCWSGSATMMADGTPVIMYTGVNRPDVNYQVQNVA LPRNGSDPLLREWVKPGHNPVIVPEGGINATQFRDPTTAWRGADGHWRLLVGSLAGQSRGVAYVYRSRDFRRWTRAAQPL HSAPTGMWECPDFYPVTADGRREGVDTSSAVVDAAASARVKYVLKNSLDLRRYDYYTVGTYDRKAERYVPDDPAGDEHHI RYDYGNFYASKTFYDPAKRRRILWGWANESDTAADDVAKGWAGIQAIPRKVWLDPSGKQLLQWPIEEVERLRGKWPVILK DRVVKPGEHVEVTGLQTAQADVEVSFEVGSLEAAERLDPAMAYDAQRLCSARGADARGGVGPFGLWVLASAGLEEKTAVF FRVFRPAARGGGAGKPVVLMCTDPTKSSRNPNMYQPTFAGFVDTDITNGKISLRSLIDRSVVESFGAGGKACILSRVYPS LAIGKNARLYVFNNGKAEIKVSQLTAWEMKKPVMMNGA* |
CDS seq | >Os04t0413500-01 ATGGGAGTTCTTGGTAGTAGGGTCGCTTGGGCATGGCTGGTCCAGCTGCTGCTGCTCCAGCAGCTCGCCGGAGCGTCGCA CGTCGTCTACGACGACCTCGAGCTGCAGGCGGCTGCTACCACAGCGGACGGCGTGCCGCCGTCCATCGTCGACTCTGAGC TCCGGACTGGGTATCACTTCCAGCCACCCAAGAACTGGATCAATGATCCGAACGCGCCGATGTACTACAAGGGGTGGTAC CATCTGTTCTACCAGTACAACCCCAAGGGCGCCGTGTGGGGGAACATCGTGTGGGCGCACTCAGTGTCACGTGACCTCAT CAACTGGGTGGCGCTCAAGCCGGCCATCGAGCCCAGCATCAGGGCCGACAAGTACGGCTGCTGGTCGGGGTCGGCGACGA TGATGGCCGACGGGACGCCGGTGATCATGTACACCGGCGTCAACCGCCCCGACGTCAACTACCAGGTGCAGAACGTGGCG CTGCCGAGGAACGGGTCGGACCCGCTGCTGCGCGAGTGGGTGAAGCCCGGCCACAACCCGGTGATCGTGCCCGAGGGCGG CATCAACGCGACGCAGTTCCGCGACCCGACCACCGCGTGGCGCGGGGCCGACGGCCACTGGCGGCTGCTCGTCGGCAGCC TCGCGGGGCAGTCCCGCGGCGTGGCGTACGTGTACCGGAGCAGGGACTTCCGGCGGTGGACGCGCGCGGCGCAGCCGCTG CACTCGGCGCCCACGGGGATGTGGGAGTGCCCGGACTTCTACCCGGTCACCGCGGACGGCCGCCGCGAGGGCGTCGACAC CTCGTCCGCCGTCGTCGACGCCGCCGCCTCGGCGCGCGTCAAGTACGTGCTCAAGAACAGCCTCGACCTGCGCCGGTACG ACTACTACACCGTCGGAACGTACGACCGGAAGGCCGAGCGGTACGTGCCGGACGACCCCGCCGGCGACGAGCACCACATC CGCTACGACTACGGCAACTTCTACGCCTCCAAGACGTTCTACGACCCGGCGAAGCGCCGCCGCATCCTCTGGGGATGGGC CAACGAGTCCGACACCGCCGCCGACGACGTGGCCAAGGGCTGGGCCGGAATCCAGGCGATTCCGAGGAAAGTGTGGCTGG ACCCAAGTGGGAAGCAACTGTTGCAGTGGCCAATCGAGGAGGTCGAGAGGCTGAGAGGGAAGTGGCCGGTCATTCTCAAG GACAGGGTGGTCAAGCCAGGGGAACACGTCGAGGTGACCGGGCTACAAACTGCACAGGCTGACGTGGAGGTGAGCTTCGA GGTGGGGAGCCTGGAGGCGGCGGAGCGGCTGGACCCGGCGATGGCGTACGACGCGCAGCGGCTGTGCAGCGCGCGGGGCG CCGACGCGAGGGGCGGCGTGGGGCCGTTCGGCCTGTGGGTGCTCGCGTCCGCGGGGCTGGAGGAGAAGACCGCCGTGTTC TTCAGGGTGTTCAGGCCGGCGGCGCGCGGCGGCGGCGCCGGCAAGCCCGTCGTGCTCATGTGCACCGACCCCACCAAGTC ATCGCGCAACCCGAACATGTACCAGCCGACGTTTGCAGGGTTCGTTGACACGGACATCACCAACGGGAAGATATCTCTGA GGAGCCTGATCGACAGGTCGGTTGTTGAGAGCTTCGGGGCTGGAGGAAAGGCGTGCATCCTGTCGAGGGTGTACCCGTCG CTGGCCATCGGCAAGAACGCGCGCCTTTACGTTTTCAATAACGGGAAGGCGGAGATCAAGGTGTCGCAGCTCACCGCGTG GGAGATGAAGAAGCCGGTCATGATGAATGGAGCCTAA |
Microexon DNA seq | ATCCGAACG |
Microexon Amino Acid seq | DPNA |
Microexon-tag DNA Seq | GAGCTCCGGACTGGGTATCACTTCCAGCCACCCAAGAACTGGATCAATGATCCGAACGCGCCGATGTACTACAAGGGGTGGTACCATCTGTTCTACCAGTACAACCCC |
Microexon-tag Amino Acid seq | ELRTGYHFQPPKNWINDPNAPMYYKGWYHLFYQYNP |
Transcript ID | Os04t0413500-01 |
Gene ID | Os.22517 |
Gene Name | GIF1 |
Pfam domain motif | Glyco_hydro_32N |
Motif E-value | 4.5e-104 |
Motif start | 59 |
Motif end | 384 |
Protein seq | >Os04t0413500-01 MGVLGSRVAWAWLVQLLLLQQLAGASHVVYDDLELQAAATTADGVPPSIVDSELRTGYHFQPPKNWINDPNAPMYYKGWY HLFYQYNPKGAVWGNIVWAHSVSRDLINWVALKPAIEPSIRADKYGCWSGSATMMADGTPVIMYTGVNRPDVNYQVQNVA LPRNGSDPLLREWVKPGHNPVIVPEGGINATQFRDPTTAWRGADGHWRLLVGSLAGQSRGVAYVYRSRDFRRWTRAAQPL HSAPTGMWECPDFYPVTADGRREGVDTSSAVVDAAASARVKYVLKNSLDLRRYDYYTVGTYDRKAERYVPDDPAGDEHHI RYDYGNFYASKTFYDPAKRRRILWGWANESDTAADDVAKGWAGIQAIPRKVWLDPSGKQLLQWPIEEVERLRGKWPVILK DRVVKPGEHVEVTGLQTAQADVEVSFEVGSLEAAERLDPAMAYDAQRLCSARGADARGGVGPFGLWVLASAGLEEKTAVF FRVFRPAARGGGAGKPVVLMCTDPTKSSRNPNMYQPTFAGFVDTDITNGKISLRSLIDRSVVESFGAGGKACILSRVYPS LAIGKNARLYVFNNGKAEIKVSQLTAWEMKKPVMMNGA* |
CDS seq | >Os04t0413500-01 ATGGGAGTTCTTGGTAGTAGGGTCGCTTGGGCATGGCTGGTCCAGCTGCTGCTGCTCCAGCAGCTCGCCGGAGCGTCGCA CGTCGTCTACGACGACCTCGAGCTGCAGGCGGCTGCTACCACAGCGGACGGCGTGCCGCCGTCCATCGTCGACTCTGAGC TCCGGACTGGGTATCACTTCCAGCCACCCAAGAACTGGATCAATGATCCGAACGCGCCGATGTACTACAAGGGGTGGTAC CATCTGTTCTACCAGTACAACCCCAAGGGCGCCGTGTGGGGGAACATCGTGTGGGCGCACTCAGTGTCACGTGACCTCAT CAACTGGGTGGCGCTCAAGCCGGCCATCGAGCCCAGCATCAGGGCCGACAAGTACGGCTGCTGGTCGGGGTCGGCGACGA TGATGGCCGACGGGACGCCGGTGATCATGTACACCGGCGTCAACCGCCCCGACGTCAACTACCAGGTGCAGAACGTGGCG CTGCCGAGGAACGGGTCGGACCCGCTGCTGCGCGAGTGGGTGAAGCCCGGCCACAACCCGGTGATCGTGCCCGAGGGCGG CATCAACGCGACGCAGTTCCGCGACCCGACCACCGCGTGGCGCGGGGCCGACGGCCACTGGCGGCTGCTCGTCGGCAGCC TCGCGGGGCAGTCCCGCGGCGTGGCGTACGTGTACCGGAGCAGGGACTTCCGGCGGTGGACGCGCGCGGCGCAGCCGCTG CACTCGGCGCCCACGGGGATGTGGGAGTGCCCGGACTTCTACCCGGTCACCGCGGACGGCCGCCGCGAGGGCGTCGACAC CTCGTCCGCCGTCGTCGACGCCGCCGCCTCGGCGCGCGTCAAGTACGTGCTCAAGAACAGCCTCGACCTGCGCCGGTACG ACTACTACACCGTCGGAACGTACGACCGGAAGGCCGAGCGGTACGTGCCGGACGACCCCGCCGGCGACGAGCACCACATC CGCTACGACTACGGCAACTTCTACGCCTCCAAGACGTTCTACGACCCGGCGAAGCGCCGCCGCATCCTCTGGGGATGGGC CAACGAGTCCGACACCGCCGCCGACGACGTGGCCAAGGGCTGGGCCGGAATCCAGGCGATTCCGAGGAAAGTGTGGCTGG ACCCAAGTGGGAAGCAACTGTTGCAGTGGCCAATCGAGGAGGTCGAGAGGCTGAGAGGGAAGTGGCCGGTCATTCTCAAG GACAGGGTGGTCAAGCCAGGGGAACACGTCGAGGTGACCGGGCTACAAACTGCACAGGCTGACGTGGAGGTGAGCTTCGA GGTGGGGAGCCTGGAGGCGGCGGAGCGGCTGGACCCGGCGATGGCGTACGACGCGCAGCGGCTGTGCAGCGCGCGGGGCG CCGACGCGAGGGGCGGCGTGGGGCCGTTCGGCCTGTGGGTGCTCGCGTCCGCGGGGCTGGAGGAGAAGACCGCCGTGTTC TTCAGGGTGTTCAGGCCGGCGGCGCGCGGCGGCGGCGCCGGCAAGCCCGTCGTGCTCATGTGCACCGACCCCACCAAGTC ATCGCGCAACCCGAACATGTACCAGCCGACGTTTGCAGGGTTCGTTGACACGGACATCACCAACGGGAAGATATCTCTGA GGAGCCTGATCGACAGGTCGGTTGTTGAGAGCTTCGGGGCTGGAGGAAAGGCGTGCATCCTGTCGAGGGTGTACCCGTCG CTGGCCATCGGCAAGAACGCGCGCCTTTACGTTTTCAATAACGGGAAGGCGGAGATCAAGGTGTCGCAGCTCACCGCGTG GGAGATGAAGAAGCCGGTCATGATGAATGGAGCCTAA |