
Microexon ID | Os_2:19683660-19683668:+ |
Species | Oryza sativa | Coordinates | 2:19683660..19683668 |
Microexon Cluster ID | MEP22 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | Glyco_hydro_32N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | YSKYAMMGRACYGSYTWYCAYTTYCARCCYSMCAARAAYTGGATGAAYGATCCYAAYGGTCCAATGTWYTACAAGGGATKGTACCAYYTSTTCTAYCARTACAAYCCV |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | ATCCGAACG |
Microexon Amino Acid seq | DPNG |
Microexon-tag DNA Seq | CTGCTCAGGACAGGATACCACTTCCAGCCCCCGATGAACTGGATCAACGATCCGAACGGGCCACTGTATTACAAGGGATGGTACCACCTATTCTACCAGTACAACCCC |
Microexon-tag Amino Acid Seq | MLRTGYHFQPPMNWINDPNGPLYYKGWYHLFYQYNP |
Microexon-tag spanning region | 19682743-19684353 |
Microexon-tag prediction score | 0.9702 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | Os02t0534400-01x |
Reference Transcript ID | Os02t0534400-01 |
Gene ID | Os02g0534400 |
Gene Name | OSCIN1 |
Transcript ID | Os02t0534400-01 |
Protein ID | Os02t0534400-01 |
Gene ID | Os02g0534400 |
Gene Name | OSCIN1 |
Pfam domain motif | Glyco_hydro_32N |
Motif E-value | 6.6e-105 |
Motif start | 53 |
Motif end | 369 |
Protein seq | >Os02t0534400-01 MGTRLLALAPWLLLLLLQLAGASHVVHRSLEAEQAPSSVPASIVSPLLRTGYHFQPPMNWINDPNGPLYYKGWYHLFYQY NPKGAVWGNIVWAHSVSQDLINWIALEPAIKPDIPSDQYGCWSGSATILPDGTPAILYTGIDRPNINYQVQNIAFPKNAS DPLLREWVKPAYNPVATPEPGMNATQFRDPTTAWYADGHWRMLVGGLKGARLGLAYLYRSRDFKTWVRAKHPLHSALTGM WECPDFFPLQAPGLQAGLDTSVPSSKYVLKNSLDLTRYDYYTVGIYNKVTERYVPDNPAGDYHRLRYDYGNFYASKTFFD PVKHRRILLGWANESDSVTYDKAKGWAGIHAIPRKVWLDPSGKQLLQWPIEELETLRGKSVSVFDKVVKPGEHFQVTGLG TYQADVEVSLEVSGLEKAEALDPAFGDDAERLCGAKGADVRGGVVFGLWVLASAGLEEKTAVFFRVFKPAGHGAKPVVLM CTDPTKSSLSPDLYKPTFAGFVDTDISSGKISLRSLIDRSVVESFGAGGKTCILSRVYPSMAIGDKAHLYVFNNGEADIK ISHLKAWEMKKPLMNGA* |
CDS seq | >Os02t0534400-01 ATGGGGACTCGGCTCTTGGCGCTCGCGCCATGGCTGCTGCTGCTCCTCCTGCAGCTCGCCGGCGCGTCCCATGTCGTCCA CCGGAGCCTCGAGGCCGAGCAGGCGCCGAGCTCGGTGCCGGCCTCCATTGTCAGCCCCCTGCTCAGGACAGGATACCACT TCCAGCCCCCGATGAACTGGATCAACGATCCGAACGGGCCACTGTATTACAAGGGATGGTACCACCTATTCTACCAGTAC AACCCCAAGGGAGCTGTGTGGGGCAATATCGTGTGGGCTCACTCGGTATCACAGGACCTCATCAACTGGATAGCCCTTGA GCCGGCAATCAAGCCCGACATCCCCTCCGACCAGTACGGTTGTTGGTCTGGCTCTGCCACCATCCTTCCCGATGGCACGC CGGCGATCCTCTACACTGGGATCGACCGCCCCAACATCAACTACCAGGTGCAGAATATCGCATTTCCCAAGAATGCGTCA GACCCGCTCCTTCGTGAGTGGGTCAAGCCGGCCTACAACCCGGTGGCCACGCCGGAGCCTGGTATGAACGCAACGCAATT CCGCGATCCGACAACGGCCTGGTACGCCGACGGTCATTGGCGGATGCTCGTTGGTGGCCTGAAGGGGGCTCGCCTCGGCC TTGCCTACCTCTACCGGAGCCGGGACTTCAAGACATGGGTTCGGGCCAAGCACCCACTCCATTCGGCGCTCACTGGGATG TGGGAGTGCCCAGACTTCTTTCCGTTGCAAGCACCAGGTCTCCAGGCTGGCCTCGACACATCTGTGCCGAGCAGCAAGTA CGTGCTCAAGAACAGCCTCGATCTCACCCGTTATGACTACTACACGGTGGGCATCTACAACAAGGTGACGGAGCGGTATG TGCCGGACAACCCTGCTGGCGACTACCACCGGCTCCGCTATGACTACGGCAACTTCTACGCATCAAAGACCTTCTTCGAC CCGGTGAAGCACCGCCGCATCCTGCTTGGGTGGGCTAACGAGTCCGACAGCGTCACCTACGACAAGGCGAAGGGCTGGGC CGGCATCCATGCGATCCCAAGAAAGGTATGGCTGGACCCGAGCGGGAAGCAGCTTCTGCAGTGGCCAATCGAGGAGCTGG AGACGCTGAGGGGCAAATCGGTCAGCGTCTTTGACAAGGTGGTGAAGCCCGGGGAACATTTCCAAGTCACGGGCCTCGGA ACCTACCAGGCTGACGTGGAGGTGAGCTTGGAGGTGTCCGGGCTGGAGAAGGCGGAGGCGTTGGACCCGGCGTTCGGCGA CGACGCGGAGAGGCTGTGCGGCGCGAAGGGCGCGGACGTGAGGGGCGGCGTGGTGTTCGGGCTGTGGGTGCTGGCCTCCG CCGGCCTGGAGGAGAAAACCGCCGTCTTCTTCCGCGTCTTCAAGCCGGCCGGGCACGGCGCCAAGCCCGTCGTCCTCATG TGCACCGACCCTACCAAGTCTTCTCTTAGCCCGGATCTCTACAAGCCAACTTTTGCCGGGTTCGTCGACACCGACATCTC GTCCGGGAAGATCTCCTTGAGAAGCTTGATTGACCGTTCGGTGGTTGAGAGCTTCGGCGCCGGGGGCAAGACCTGCATCC TGTCGAGAGTTTACCCGTCGATGGCGATAGGTGACAAGGCCCATCTTTACGTCTTCAACAATGGGGAGGCGGATATTAAG ATTTCACATCTGAAAGCGTGGGAAATGAAGAAGCCGCTTATGAATGGCGCCTAA |
Microexon DNA seq | ATCCGAACG |
Microexon Amino Acid seq | DPNG |
Microexon-tag DNA Seq | CTGCTCAGGACAGGATACCACTTCCAGCCCCCGATGAACTGGATCAACGATCCGAACGGGCCACTGTATTACAAGGGATGGTACCACCTATTCTACCAGTACAACCCC |
Microexon-tag Amino Acid seq | MLRTGYHFQPPMNWINDPNGPLYYKGWYHLFYQYNP |
Transcript ID | Os02t0534400-01 |
Gene ID | Os.14366 |
Gene Name | OSCIN1 |
Pfam domain motif | Glyco_hydro_32N |
Motif E-value | 6.6e-105 |
Motif start | 53 |
Motif end | 369 |
Protein seq | >Os02t0534400-01 MGTRLLALAPWLLLLLLQLAGASHVVHRSLEAEQAPSSVPASIVSPLLRTGYHFQPPMNWINDPNGPLYYKGWYHLFYQY NPKGAVWGNIVWAHSVSQDLINWIALEPAIKPDIPSDQYGCWSGSATILPDGTPAILYTGIDRPNINYQVQNIAFPKNAS DPLLREWVKPAYNPVATPEPGMNATQFRDPTTAWYADGHWRMLVGGLKGARLGLAYLYRSRDFKTWVRAKHPLHSALTGM WECPDFFPLQAPGLQAGLDTSVPSSKYVLKNSLDLTRYDYYTVGIYNKVTERYVPDNPAGDYHRLRYDYGNFYASKTFFD PVKHRRILLGWANESDSVTYDKAKGWAGIHAIPRKVWLDPSGKQLLQWPIEELETLRGKSVSVFDKVVKPGEHFQVTGLG TYQADVEVSLEVSGLEKAEALDPAFGDDAERLCGAKGADVRGGVVFGLWVLASAGLEEKTAVFFRVFKPAGHGAKPVVLM CTDPTKSSLSPDLYKPTFAGFVDTDISSGKISLRSLIDRSVVESFGAGGKTCILSRVYPSMAIGDKAHLYVFNNGEADIK ISHLKAWEMKKPLMNGA* |
CDS seq | >Os02t0534400-01 ATGGGGACTCGGCTCTTGGCGCTCGCGCCATGGCTGCTGCTGCTCCTCCTGCAGCTCGCCGGCGCGTCCCATGTCGTCCA CCGGAGCCTCGAGGCCGAGCAGGCGCCGAGCTCGGTGCCGGCCTCCATTGTCAGCCCCCTGCTCAGGACAGGATACCACT TCCAGCCCCCGATGAACTGGATCAACGATCCGAACGGGCCACTGTATTACAAGGGATGGTACCACCTATTCTACCAGTAC AACCCCAAGGGAGCTGTGTGGGGCAATATCGTGTGGGCTCACTCGGTATCACAGGACCTCATCAACTGGATAGCCCTTGA GCCGGCAATCAAGCCCGACATCCCCTCCGACCAGTACGGTTGTTGGTCTGGCTCTGCCACCATCCTTCCCGATGGCACGC CGGCGATCCTCTACACTGGGATCGACCGCCCCAACATCAACTACCAGGTGCAGAATATCGCATTTCCCAAGAATGCGTCA GACCCGCTCCTTCGTGAGTGGGTCAAGCCGGCCTACAACCCGGTGGCCACGCCGGAGCCTGGTATGAACGCAACGCAATT CCGCGATCCGACAACGGCCTGGTACGCCGACGGTCATTGGCGGATGCTCGTTGGTGGCCTGAAGGGGGCTCGCCTCGGCC TTGCCTACCTCTACCGGAGCCGGGACTTCAAGACATGGGTTCGGGCCAAGCACCCACTCCATTCGGCGCTCACTGGGATG TGGGAGTGCCCAGACTTCTTTCCGTTGCAAGCACCAGGTCTCCAGGCTGGCCTCGACACATCTGTGCCGAGCAGCAAGTA CGTGCTCAAGAACAGCCTCGATCTCACCCGTTATGACTACTACACGGTGGGCATCTACAACAAGGTGACGGAGCGGTATG TGCCGGACAACCCTGCTGGCGACTACCACCGGCTCCGCTATGACTACGGCAACTTCTACGCATCAAAGACCTTCTTCGAC CCGGTGAAGCACCGCCGCATCCTGCTTGGGTGGGCTAACGAGTCCGACAGCGTCACCTACGACAAGGCGAAGGGCTGGGC CGGCATCCATGCGATCCCAAGAAAGGTATGGCTGGACCCGAGCGGGAAGCAGCTTCTGCAGTGGCCAATCGAGGAGCTGG AGACGCTGAGGGGCAAATCGGTCAGCGTCTTTGACAAGGTGGTGAAGCCCGGGGAACATTTCCAAGTCACGGGCCTCGGA ACCTACCAGGCTGACGTGGAGGTGAGCTTGGAGGTGTCCGGGCTGGAGAAGGCGGAGGCGTTGGACCCGGCGTTCGGCGA CGACGCGGAGAGGCTGTGCGGCGCGAAGGGCGCGGACGTGAGGGGCGGCGTGGTGTTCGGGCTGTGGGTGCTGGCCTCCG CCGGCCTGGAGGAGAAAACCGCCGTCTTCTTCCGCGTCTTCAAGCCGGCCGGGCACGGCGCCAAGCCCGTCGTCCTCATG TGCACCGACCCTACCAAGTCTTCTCTTAGCCCGGATCTCTACAAGCCAACTTTTGCCGGGTTCGTCGACACCGACATCTC GTCCGGGAAGATCTCCTTGAGAAGCTTGATTGACCGTTCGGTGGTTGAGAGCTTCGGCGCCGGGGGCAAGACCTGCATCC TGTCGAGAGTTTACCCGTCGATGGCGATAGGTGACAAGGCCCATCTTTACGTCTTCAACAATGGGGAGGCGGATATTAAG ATTTCACATCTGAAAGCGTGGGAAATGAAGAAGCCGCTTATGAATGGCGCCTAA |