Microexon ID Hv_7H:2994845-2994853:-
Species Hordeum   Vulgare
Coordinates 7H:2994845..2994853
Microexon Cluster ID MEP22
Size 9
Phase 1
Pfam Domain Motif Glyco_hydro_32N
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 49,9,50
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq YSKYAMMGRACYGSYTWYCAYTTYCARCCYSMCAARAAYTGGATGAAYGATCCYAAYGGTCCAATGTWYTACAAGGGATKGTACCAYYTSTTCTAYCARTACAAYCCV
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq ATCCCAACG
Microexon Amino Acid seq DPNG
Microexon-tag DNA Seq TGGCAGCGCACCGGATTCCATTTCCAGCCCGAGAAGAACTGGATGAACGATCCCAACGGTCCTGTGTACTACCGCGGATGGTACCACCTCTTCTACCAGTACAACCCG
Microexon-tag Amino Acid Seq WQRTGFHFQPEKNWMNDPNGPVYYRGWYHLFYQYNP
Microexon-tag spanning region2994031-2995076
Microexon-tag prediction score0.9744
Overlapped with the annotated transcript (%) 100
New Transcript ID HORVU.MOREX.r3.7HG0635380.1x
Reference Transcript ID HORVU.MOREX.r3.7HG0635380.1
Gene ID HORVU.MOREX.r3.7HG0635380
Gene Name NA
Transcript ID HORVU.MOREX.r3.7HG0635380.1
Protein ID
Gene ID HORVU.MOREX.r3.7HG0635380
Gene Name
Pfam domain motif Glyco_hydro_32N
Motif E-value 6.30E-106
Motif start 135
Motif end 447
Protein seq >HORVU.MOREX.r3.7HG0635380.1
MEPRAVSPGETALPYAYAYAPLAPSDVADERRTGAGGGVRWRACVAVLAASAVVVLVVASALAGSSRVDRVVGGDVVADM
PPLADTARSRGRDAGVSEKTSGAAYEMVGLLAAGGDADGFPWSNAMLQWQRTGFHFQPEKNWMNDPNGPVYYRGWYHLFY
QYNPEGAVWGNIAWGHAVSRDLIHWRHLPLAMVPDQWYDINGVWTGSATVLPDGSLVMLYTGSTNASVQVQCLAVPTDPN
DSLLRNWTKHEANPILFPPPGIGDKDFRDPTTAWFDESDKTWRIVIGSKDNHGHTGIVMTYKTKDFINYELIPNLLHSVS
GTGMWECIDFYPVGGADGSEELYVMKESSDDDRHDWYALGRYDAAANKYTAIDAEMDVGIGLRYDWGKFYASKTFYDPAK
NRRVLWGWIGETDSERADVAKGWASLMSIPRTVVLDEKTRTNLIQWPVVEIETLRINSTDLGGTTIDTGSVFPLPLRRAT
QLDIEATFHLDASAVAAVNEADVGYNCSTSGGAANRGALGPFGLLVLADGALQEQTAVYFYVSRGLDGGLQTHFCQDESR
SSLAQDVVKRVVGFTVPVLDGEDLSLRVLVDHSIVESFAMGGRSTATSRVYPTEAIYAAAGVYLFNNATSAAVTVEKLMV
HEMDDSYNQIFTAEDASAAL*
CDS seq >HORVU.MOREX.r3.7HG0635380.1
ATGGAGCCCCGGGCCGTTAGCCCCGGCGAGACGGCGCTGCCGTACGCGTACGCCTACGCGCCGCTGGCCCCGTCCGACGT
CGCGGACGAGCGACGGACCGGCGCCGGCGGCGGGGTGAGGTGGCGCGCGTGCGTCGCCGTGCTGGCCGCCTCGGCCGTGG
TGGTGCTGGTCGTGGCCAGCGCGCTCGCCGGGTCCAGCAGGGTGGACAGGGTCGTGGGCGGCGACGTGGTCGCGGACATG
CCGCCGCTGGCGGACACGGCGCGGAGCCGCGGCAGGGACGCCGGCGTGTCGGAGAAGACCTCCGGCGCGGCGTACGAGAT
GGTGGGCCTCCTCGCCGCCGGCGGCGACGCCGACGGCTTCCCCTGGAGCAACGCCATGCTCCAGTGGCAGCGCACCGGAT
TCCATTTCCAGCCCGAGAAGAACTGGATGAACGATCCCAACGGTCCTGTGTACTACCGCGGATGGTACCACCTCTTCTAC
CAGTACAACCCGGAGGGGGCGGTGTGGGGGAACATCGCGTGGGGGCACGCCGTGTCCCGCGACCTCATCCACTGGCGCCA
CCTCCCGCTCGCCATGGTGCCCGACCAGTGGTACGACATCAACGGCGTCTGGACCGGCTCCGCCACCGTGCTCCCAGACG
GCTCCCTCGTCATGCTCTACACCGGTTCCACCAACGCTTCCGTGCAGGTCCAATGCCTCGCCGTGCCCACCGACCCCAAC
GACTCCCTCCTCCGCAACTGGACCAAGCACGAGGCCAACCCTATCCTCTTCCCGCCTCCCGGCATCGGCGACAAGGACTT
CCGTGACCCCACCACCGCCTGGTTCGACGAGTCCGACAAGACGTGGCGCATCGTCATCGGGTCCAAGGACAACCACGGGC
ACACCGGCATCGTCATGACATACAAGACAAAGGACTTTATCAACTATGAGCTCATCCCCAACTTGCTCCATAGCGTCTCT
GGCACTGGCATGTGGGAGTGCATCGACTTCTACCCTGTCGGTGGGGCCGATGGCTCGGAGGAGTTGTACGTGATGAAGGA
GAGCAGCGACGATGACCGCCACGACTGGTACGCGCTCGGGAGGTACGACGCTGCTGCCAACAAGTATACAGCGATAGACG
CGGAGATGGATGTTGGGATCGGTCTGAGGTACGACTGGGGCAAGTTCTACGCGTCCAAGACCTTCTACGACCCTGCCAAG
AACCGCCGCGTGCTGTGGGGATGGATCGGCGAGACCGACTCCGAGCGCGCCGACGTGGCCAAGGGATGGGCGTCCCTAAT
GTCGATCCCAAGGACGGTGGTGCTGGACGAGAAGACCCGGACGAACCTCATCCAGTGGCCCGTCGTGGAGATCGAGACGC
TCCGCATCAACTCCACCGACCTCGGTGGTACCACCATCGACACTGGGAGCGTGTTCCCTCTCCCGCTCCGTCGCGCCACC
CAGCTCGACATTGAGGCCACCTTCCACCTCGACGCCTCAGCCGTTGCCGCTGTCAACGAGGCTGATGTCGGCTACAACTG
CAGCACCAGCGGCGGCGCCGCCAACCGTGGCGCGCTCGGCCCCTTCGGACTCCTCGTCCTTGCTGACGGTGCCCTCCAGG
AGCAGACGGCCGTGTACTTCTACGTGTCGAGGGGCCTCGATGGAGGCCTCCAAACCCATTTCTGCCAGGACGAGTCGCGA
TCGTCGCTGGCCCAGGACGTCGTGAAGCGGGTGGTCGGTTTCACCGTGCCTGTGCTTGACGGTGAGGATCTATCCCTCAG
GGTGTTGGTGGACCACTCGATCGTGGAGAGCTTCGCCATGGGTGGCAGGTCCACGGCAACGTCGAGGGTGTACCCGACGG
AGGCCATCTACGCCGCCGCAGGCGTGTACCTTTTCAACAACGCCACCAGCGCCGCCGTCACCGTCGAGAAGCTCATGGTG
CATGAGATGGACGACTCCTACAACCAGATCTTCACGGCCGAAGACGCCTCAGCCGCCTTGTAG
Hv_7H:2994845-2994853:- does not have available information here.