
Microexon ID | Hv_7H:2994845-2994853:- |
Species | Hordeum Vulgare | Coordinates | 7H:2994845..2994853 |
Microexon Cluster ID | MEP22 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | Glyco_hydro_32N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | YSKYAMMGRACYGSYTWYCAYTTYCARCCYSMCAARAAYTGGATGAAYGATCCYAAYGGTCCAATGTWYTACAAGGGATKGTACCAYYTSTTCTAYCARTACAAYCCV |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | ATCCCAACG |
Microexon Amino Acid seq | DPNG |
Microexon-tag DNA Seq | TGGCAGCGCACCGGATTCCATTTCCAGCCCGAGAAGAACTGGATGAACGATCCCAACGGTCCTGTGTACTACCGCGGATGGTACCACCTCTTCTACCAGTACAACCCG |
Microexon-tag Amino Acid Seq | WQRTGFHFQPEKNWMNDPNGPVYYRGWYHLFYQYNP |
Microexon-tag spanning region | 2994031-2995076 |
Microexon-tag prediction score | 0.9744 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | HORVU.MOREX.r3.7HG0635380.1x |
Reference Transcript ID | HORVU.MOREX.r3.7HG0635380.1 |
Gene ID | HORVU.MOREX.r3.7HG0635380 |
Gene Name | NA |
Transcript ID | HORVU.MOREX.r3.7HG0635380.1 |
Protein ID | |
Gene ID | HORVU.MOREX.r3.7HG0635380 |
Gene Name | |
Pfam domain motif | Glyco_hydro_32N |
Motif E-value | 6.30E-106 |
Motif start | 135 |
Motif end | 447 |
Protein seq | >HORVU.MOREX.r3.7HG0635380.1 MEPRAVSPGETALPYAYAYAPLAPSDVADERRTGAGGGVRWRACVAVLAASAVVVLVVASALAGSSRVDRVVGGDVVADM PPLADTARSRGRDAGVSEKTSGAAYEMVGLLAAGGDADGFPWSNAMLQWQRTGFHFQPEKNWMNDPNGPVYYRGWYHLFY QYNPEGAVWGNIAWGHAVSRDLIHWRHLPLAMVPDQWYDINGVWTGSATVLPDGSLVMLYTGSTNASVQVQCLAVPTDPN DSLLRNWTKHEANPILFPPPGIGDKDFRDPTTAWFDESDKTWRIVIGSKDNHGHTGIVMTYKTKDFINYELIPNLLHSVS GTGMWECIDFYPVGGADGSEELYVMKESSDDDRHDWYALGRYDAAANKYTAIDAEMDVGIGLRYDWGKFYASKTFYDPAK NRRVLWGWIGETDSERADVAKGWASLMSIPRTVVLDEKTRTNLIQWPVVEIETLRINSTDLGGTTIDTGSVFPLPLRRAT QLDIEATFHLDASAVAAVNEADVGYNCSTSGGAANRGALGPFGLLVLADGALQEQTAVYFYVSRGLDGGLQTHFCQDESR SSLAQDVVKRVVGFTVPVLDGEDLSLRVLVDHSIVESFAMGGRSTATSRVYPTEAIYAAAGVYLFNNATSAAVTVEKLMV HEMDDSYNQIFTAEDASAAL* |
CDS seq | >HORVU.MOREX.r3.7HG0635380.1 ATGGAGCCCCGGGCCGTTAGCCCCGGCGAGACGGCGCTGCCGTACGCGTACGCCTACGCGCCGCTGGCCCCGTCCGACGT CGCGGACGAGCGACGGACCGGCGCCGGCGGCGGGGTGAGGTGGCGCGCGTGCGTCGCCGTGCTGGCCGCCTCGGCCGTGG TGGTGCTGGTCGTGGCCAGCGCGCTCGCCGGGTCCAGCAGGGTGGACAGGGTCGTGGGCGGCGACGTGGTCGCGGACATG CCGCCGCTGGCGGACACGGCGCGGAGCCGCGGCAGGGACGCCGGCGTGTCGGAGAAGACCTCCGGCGCGGCGTACGAGAT GGTGGGCCTCCTCGCCGCCGGCGGCGACGCCGACGGCTTCCCCTGGAGCAACGCCATGCTCCAGTGGCAGCGCACCGGAT TCCATTTCCAGCCCGAGAAGAACTGGATGAACGATCCCAACGGTCCTGTGTACTACCGCGGATGGTACCACCTCTTCTAC CAGTACAACCCGGAGGGGGCGGTGTGGGGGAACATCGCGTGGGGGCACGCCGTGTCCCGCGACCTCATCCACTGGCGCCA CCTCCCGCTCGCCATGGTGCCCGACCAGTGGTACGACATCAACGGCGTCTGGACCGGCTCCGCCACCGTGCTCCCAGACG GCTCCCTCGTCATGCTCTACACCGGTTCCACCAACGCTTCCGTGCAGGTCCAATGCCTCGCCGTGCCCACCGACCCCAAC GACTCCCTCCTCCGCAACTGGACCAAGCACGAGGCCAACCCTATCCTCTTCCCGCCTCCCGGCATCGGCGACAAGGACTT CCGTGACCCCACCACCGCCTGGTTCGACGAGTCCGACAAGACGTGGCGCATCGTCATCGGGTCCAAGGACAACCACGGGC ACACCGGCATCGTCATGACATACAAGACAAAGGACTTTATCAACTATGAGCTCATCCCCAACTTGCTCCATAGCGTCTCT GGCACTGGCATGTGGGAGTGCATCGACTTCTACCCTGTCGGTGGGGCCGATGGCTCGGAGGAGTTGTACGTGATGAAGGA GAGCAGCGACGATGACCGCCACGACTGGTACGCGCTCGGGAGGTACGACGCTGCTGCCAACAAGTATACAGCGATAGACG CGGAGATGGATGTTGGGATCGGTCTGAGGTACGACTGGGGCAAGTTCTACGCGTCCAAGACCTTCTACGACCCTGCCAAG AACCGCCGCGTGCTGTGGGGATGGATCGGCGAGACCGACTCCGAGCGCGCCGACGTGGCCAAGGGATGGGCGTCCCTAAT GTCGATCCCAAGGACGGTGGTGCTGGACGAGAAGACCCGGACGAACCTCATCCAGTGGCCCGTCGTGGAGATCGAGACGC TCCGCATCAACTCCACCGACCTCGGTGGTACCACCATCGACACTGGGAGCGTGTTCCCTCTCCCGCTCCGTCGCGCCACC CAGCTCGACATTGAGGCCACCTTCCACCTCGACGCCTCAGCCGTTGCCGCTGTCAACGAGGCTGATGTCGGCTACAACTG CAGCACCAGCGGCGGCGCCGCCAACCGTGGCGCGCTCGGCCCCTTCGGACTCCTCGTCCTTGCTGACGGTGCCCTCCAGG AGCAGACGGCCGTGTACTTCTACGTGTCGAGGGGCCTCGATGGAGGCCTCCAAACCCATTTCTGCCAGGACGAGTCGCGA TCGTCGCTGGCCCAGGACGTCGTGAAGCGGGTGGTCGGTTTCACCGTGCCTGTGCTTGACGGTGAGGATCTATCCCTCAG GGTGTTGGTGGACCACTCGATCGTGGAGAGCTTCGCCATGGGTGGCAGGTCCACGGCAACGTCGAGGGTGTACCCGACGG AGGCCATCTACGCCGCCGCAGGCGTGTACCTTTTCAACAACGCCACCAGCGCCGCCGTCACCGTCGAGAAGCTCATGGTG CATGAGATGGACGACTCCTACAACCAGATCTTCACGGCCGAAGACGCCTCAGCCGCCTTGTAG |
Hv_7H:2994845-2994853:- does not have available information here.