Microexon ID Hv_7H:2751701-2751709:-
Species Hordeum   Vulgare
Coordinates 7H:2751701..2751709
Microexon Cluster ID MEP22
Size 9
Phase 1
Pfam Domain Motif Glyco_hydro_32N
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 49,9,50
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq YSKYAMMGRACYGSYTWYCAYTTYCARCCYSMCAARAAYTGGATGAAYGATCCYAAYGGTCCAATGTWYTACAAGGGATKGTACCAYYTSTTCTAYCARTACAAYCCV
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq ATCCCAACG
Microexon Amino Acid seq DPNG
Microexon-tag DNA Seq TGGCAGCGCAGCGGTTACCATTTCCAGACGGCCAAGAACTACATGAGCGATCCCAACGGCCTGATGTATTACCGTGGATGGTACCACATGTTCTACCAGTACAACCCG
Microexon-tag Amino Acid Seq WQRSGYHFQTAKNYMSDPNGLMYYRGWYHMFYQYNP
Microexon-tag spanning region2751083-2751896
Microexon-tag prediction score0.9431
Overlapped with the annotated transcript (%) 100
New Transcript ID HORVU.MOREX.r3.7HG0635300.1x
Reference Transcript ID HORVU.MOREX.r3.7HG0635300.1
Gene ID HORVU.MOREX.r3.7HG0635300
Gene Name NA
Transcript ID HORVU.MOREX.r3.7HG0635300.1
Protein ID
Gene ID HORVU.MOREX.r3.7HG0635300
Gene Name
Pfam domain motif Glyco_hydro_32N
Motif E-value 4.40E-93
Motif start 86
Motif end 405
Protein seq >HORVU.MOREX.r3.7HG0635300.1
MGSHGKPPLPYAYKPLPSDAADGKRTGCMRWSACATVLTASAMAVVVVGATLLAGLRMEQAVDEEAAAGGFPWSNEMLQW
QRSGYHFQTAKNYMSDPNGLMYYRGWYHMFYQYNPVGTDWDDGMEWGHAVSRNLVQWRTLPIAMVADQWYDILGVLSGSM
TVLPNGTVIMIYTGATNASAVEVQCIATPADPNDPLLRRWTKHPANPVIWSPPGVGTKDFRDPMTAWYDESDDTWRTLLG
SKDDHDGHHDGIAMMYKTKDFLNYELIPGILHRVVRTGEWECIDFYPVGRRSSDNSSEMLHVLKASMDDERHDYYSLGTY
DSAANTWTPIDPELDLGIGLRYDWGKFYASTSFYDPAKKRRVLMGYVGEVDSKRADVVKGWASIQSVPRTVALDEKTRTN
LLLWPVEEIETLRLNATELTDVTINTGSVIHIPLRQGTQLDIEASFHLDASAVAALNEADVGYNCSSSGGAVNRGALGPF
GLLVLAAGDRRGEQTAVYFYVSRGLDGGLHTSFCQDELRSSRAKDVTKRVIGSTVPVLDGEALSMRVLVDHSIVQGFAMG
GRTTMTSRVYPMESYQEARVYLFNNATGASVTAERLVVHEMDSAHNQLSNEDDGMYLQSSS*
CDS seq >HORVU.MOREX.r3.7HG0635300.1
ATGGGGTCACACGGCAAGCCACCGCTACCGTATGCCTACAAGCCGCTGCCCTCGGACGCCGCCGACGGTAAGCGGACCGG
CTGCATGAGGTGGTCCGCGTGTGCCACCGTGCTGACGGCCTCGGCCATGGCGGTGGTGGTGGTCGGCGCCACGCTCCTGG
CGGGATTGAGGATGGAGCAGGCCGTCGACGAGGAGGCGGCGGCGGGCGGGTTCCCGTGGAGCAACGAGATGCTGCAGTGG
CAGCGCAGCGGTTACCATTTCCAGACGGCCAAGAACTACATGAGCGATCCCAACGGCCTGATGTATTACCGTGGATGGTA
CCACATGTTCTACCAGTACAACCCGGTGGGCACCGACTGGGACGACGGCATGGAGTGGGGCCACGCCGTGTCCCGGAACC
TTGTCCAATGGCGCACCCTCCCTATCGCCATGGTTGCCGACCAGTGGTACGACATCCTCGGAGTCCTCTCCGGCTCTATG
ACGGTGCTACCCAACGGGACGGTCATCATGATCTACACGGGCGCCACCAACGCCTCCGCCGTCGAGGTCCAGTGCATCGC
CACCCCGGCCGACCCCAACGACCCCCTCCTCCGCCGGTGGACCAAGCACCCCGCCAACCCCGTCATCTGGTCGCCGCCGG
GGGTGGGCACCAAGGATTTCCGAGACCCGATGACCGCCTGGTACGACGAGTCCGACGACACATGGCGCACCCTGCTCGGG
TCCAAGGACGACCACGACGGCCACCACGACGGCATCGCCATGATGTACAAGACCAAGGACTTCCTCAACTACGAGCTCAT
CCCGGGCATCTTGCACCGGGTGGTGCGCACCGGCGAGTGGGAGTGCATCGACTTCTACCCCGTCGGCCGGAGAAGCAGCG
ACAACTCGTCGGAGATGCTGCACGTGTTGAAGGCGAGCATGGACGACGAACGGCACGACTACTACTCGCTGGGCACGTAC
GACTCGGCGGCCAACACCTGGACGCCCATCGACCCGGAGCTCGACTTGGGGATCGGGCTGAGATACGACTGGGGTAAGTT
TTATGCGTCCACCTCCTTCTATGATCCGGCCAAGAAGCGGCGCGTGCTCATGGGGTACGTCGGCGAGGTCGACTCCAAGC
GGGCTGATGTCGTCAAGGGATGGGCTTCCATTCAGTCAGTTCCTAGGACGGTGGCTCTGGATGAGAAGACCCGGACGAAC
CTCCTGCTGTGGCCCGTGGAGGAGATCGAGACCCTCCGCCTCAATGCCACGGAACTGACCGACGTTACCATTAACACTGG
CTCCGTCATCCATATCCCGCTCCGCCAAGGCACTCAGCTCGACATCGAGGCCTCTTTCCACCTTGATGCTTCCGCCGTGG
CTGCCCTCAACGAGGCCGATGTGGGCTACAACTGCAGTAGCAGCGGCGGCGCCGTTAACCGCGGCGCGCTAGGCCCCTTC
GGCCTCCTCGTCCTCGCCGCCGGTGACCGCCGTGGCGAGCAAACGGCGGTCTACTTCTACGTGTCTAGGGGCCTTGACGG
AGGCCTCCACACCAGCTTCTGCCAAGATGAGTTGAGATCGTCTCGAGCCAAGGATGTGACCAAGCGTGTCATCGGGAGCA
CGGTGCCGGTGCTCGACGGTGAGGCTTTGTCAATGAGGGTGCTCGTGGATCACTCCATCGTGCAGGGCTTCGCCATGGGC
GGGAGGACCACGATGACCTCGCGGGTGTACCCGATGGAGTCGTATCAGGAGGCAAGAGTCTACTTGTTCAACAACGCCAC
CGGTGCCAGCGTCACGGCGGAAAGGCTTGTGGTGCACGAGATGGACTCAGCACACAACCAGCTCTCCAATGAGGACGATG
GCATGTATCTTCAATCAAGTTCTTGA
Hv_7H:2751701-2751709:- does not have available information here.