
Microexon ID | Hv_7H:2751701-2751709:- |
Species | Hordeum Vulgare | Coordinates | 7H:2751701..2751709 |
Microexon Cluster ID | MEP22 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | Glyco_hydro_32N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | YSKYAMMGRACYGSYTWYCAYTTYCARCCYSMCAARAAYTGGATGAAYGATCCYAAYGGTCCAATGTWYTACAAGGGATKGTACCAYYTSTTCTAYCARTACAAYCCV |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | ATCCCAACG |
Microexon Amino Acid seq | DPNG |
Microexon-tag DNA Seq | TGGCAGCGCAGCGGTTACCATTTCCAGACGGCCAAGAACTACATGAGCGATCCCAACGGCCTGATGTATTACCGTGGATGGTACCACATGTTCTACCAGTACAACCCG |
Microexon-tag Amino Acid Seq | WQRSGYHFQTAKNYMSDPNGLMYYRGWYHMFYQYNP |
Microexon-tag spanning region | 2751083-2751896 |
Microexon-tag prediction score | 0.9431 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | HORVU.MOREX.r3.7HG0635300.1x |
Reference Transcript ID | HORVU.MOREX.r3.7HG0635300.1 |
Gene ID | HORVU.MOREX.r3.7HG0635300 |
Gene Name | NA |
Transcript ID | HORVU.MOREX.r3.7HG0635300.1 |
Protein ID | |
Gene ID | HORVU.MOREX.r3.7HG0635300 |
Gene Name | |
Pfam domain motif | Glyco_hydro_32N |
Motif E-value | 4.40E-93 |
Motif start | 86 |
Motif end | 405 |
Protein seq | >HORVU.MOREX.r3.7HG0635300.1 MGSHGKPPLPYAYKPLPSDAADGKRTGCMRWSACATVLTASAMAVVVVGATLLAGLRMEQAVDEEAAAGGFPWSNEMLQW QRSGYHFQTAKNYMSDPNGLMYYRGWYHMFYQYNPVGTDWDDGMEWGHAVSRNLVQWRTLPIAMVADQWYDILGVLSGSM TVLPNGTVIMIYTGATNASAVEVQCIATPADPNDPLLRRWTKHPANPVIWSPPGVGTKDFRDPMTAWYDESDDTWRTLLG SKDDHDGHHDGIAMMYKTKDFLNYELIPGILHRVVRTGEWECIDFYPVGRRSSDNSSEMLHVLKASMDDERHDYYSLGTY DSAANTWTPIDPELDLGIGLRYDWGKFYASTSFYDPAKKRRVLMGYVGEVDSKRADVVKGWASIQSVPRTVALDEKTRTN LLLWPVEEIETLRLNATELTDVTINTGSVIHIPLRQGTQLDIEASFHLDASAVAALNEADVGYNCSSSGGAVNRGALGPF GLLVLAAGDRRGEQTAVYFYVSRGLDGGLHTSFCQDELRSSRAKDVTKRVIGSTVPVLDGEALSMRVLVDHSIVQGFAMG GRTTMTSRVYPMESYQEARVYLFNNATGASVTAERLVVHEMDSAHNQLSNEDDGMYLQSSS* |
CDS seq | >HORVU.MOREX.r3.7HG0635300.1 ATGGGGTCACACGGCAAGCCACCGCTACCGTATGCCTACAAGCCGCTGCCCTCGGACGCCGCCGACGGTAAGCGGACCGG CTGCATGAGGTGGTCCGCGTGTGCCACCGTGCTGACGGCCTCGGCCATGGCGGTGGTGGTGGTCGGCGCCACGCTCCTGG CGGGATTGAGGATGGAGCAGGCCGTCGACGAGGAGGCGGCGGCGGGCGGGTTCCCGTGGAGCAACGAGATGCTGCAGTGG CAGCGCAGCGGTTACCATTTCCAGACGGCCAAGAACTACATGAGCGATCCCAACGGCCTGATGTATTACCGTGGATGGTA CCACATGTTCTACCAGTACAACCCGGTGGGCACCGACTGGGACGACGGCATGGAGTGGGGCCACGCCGTGTCCCGGAACC TTGTCCAATGGCGCACCCTCCCTATCGCCATGGTTGCCGACCAGTGGTACGACATCCTCGGAGTCCTCTCCGGCTCTATG ACGGTGCTACCCAACGGGACGGTCATCATGATCTACACGGGCGCCACCAACGCCTCCGCCGTCGAGGTCCAGTGCATCGC CACCCCGGCCGACCCCAACGACCCCCTCCTCCGCCGGTGGACCAAGCACCCCGCCAACCCCGTCATCTGGTCGCCGCCGG GGGTGGGCACCAAGGATTTCCGAGACCCGATGACCGCCTGGTACGACGAGTCCGACGACACATGGCGCACCCTGCTCGGG TCCAAGGACGACCACGACGGCCACCACGACGGCATCGCCATGATGTACAAGACCAAGGACTTCCTCAACTACGAGCTCAT CCCGGGCATCTTGCACCGGGTGGTGCGCACCGGCGAGTGGGAGTGCATCGACTTCTACCCCGTCGGCCGGAGAAGCAGCG ACAACTCGTCGGAGATGCTGCACGTGTTGAAGGCGAGCATGGACGACGAACGGCACGACTACTACTCGCTGGGCACGTAC GACTCGGCGGCCAACACCTGGACGCCCATCGACCCGGAGCTCGACTTGGGGATCGGGCTGAGATACGACTGGGGTAAGTT TTATGCGTCCACCTCCTTCTATGATCCGGCCAAGAAGCGGCGCGTGCTCATGGGGTACGTCGGCGAGGTCGACTCCAAGC GGGCTGATGTCGTCAAGGGATGGGCTTCCATTCAGTCAGTTCCTAGGACGGTGGCTCTGGATGAGAAGACCCGGACGAAC CTCCTGCTGTGGCCCGTGGAGGAGATCGAGACCCTCCGCCTCAATGCCACGGAACTGACCGACGTTACCATTAACACTGG CTCCGTCATCCATATCCCGCTCCGCCAAGGCACTCAGCTCGACATCGAGGCCTCTTTCCACCTTGATGCTTCCGCCGTGG CTGCCCTCAACGAGGCCGATGTGGGCTACAACTGCAGTAGCAGCGGCGGCGCCGTTAACCGCGGCGCGCTAGGCCCCTTC GGCCTCCTCGTCCTCGCCGCCGGTGACCGCCGTGGCGAGCAAACGGCGGTCTACTTCTACGTGTCTAGGGGCCTTGACGG AGGCCTCCACACCAGCTTCTGCCAAGATGAGTTGAGATCGTCTCGAGCCAAGGATGTGACCAAGCGTGTCATCGGGAGCA CGGTGCCGGTGCTCGACGGTGAGGCTTTGTCAATGAGGGTGCTCGTGGATCACTCCATCGTGCAGGGCTTCGCCATGGGC GGGAGGACCACGATGACCTCGCGGGTGTACCCGATGGAGTCGTATCAGGAGGCAAGAGTCTACTTGTTCAACAACGCCAC CGGTGCCAGCGTCACGGCGGAAAGGCTTGTGGTGCACGAGATGGACTCAGCACACAACCAGCTCTCCAATGAGGACGATG GCATGTATCTTCAATCAAGTTCTTGA |
Hv_7H:2751701-2751709:- does not have available information here.