Microexon ID Hv_7H:2630004-2630012:-
Species Hordeum   Vulgare
Coordinates 7H:2630004..2630012
Microexon Cluster ID MEP22
Size 9
Phase 1
Pfam Domain Motif Glyco_hydro_32N
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 49,9,50
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq YSKYAMMGRACYGSYTWYCAYTTYCARCCYSMCAARAAYTGGATGAAYGATCCYAAYGGTCCAATGTWYTACAAGGGATKGTACCAYYTSTTCTAYCARTACAAYCCV
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq ATCCAAACG
Microexon Amino Acid seq DPNA
Microexon-tag DNA Seq TGGCAGCGCACCGGGTTCCATTTCCAGCCGGAGAAGAACTACATGAACGATCCAAACGCTCCAATGTATTACCGTGGACGGCACCACTTCTTCTACCAGTACAACCCT
Microexon-tag Amino Acid Seq WQRTGFHFQPEKNYMNDPNAPMYYRGRHHFFYQYNP
Microexon-tag spanning region2629851-2630260
Microexon-tag prediction score0.9504
Overlapped with the annotated transcript (%) 100
New Transcript ID HORVU.MOREX.r3.7HG0635200.1x
Reference Transcript ID HORVU.MOREX.r3.7HG0635200.1
Gene ID HORVU.MOREX.r3.7HG0635200
Gene Name NA
Transcript ID HORVU.MOREX.r3.7HG0635200.1
Protein ID
Gene ID HORVU.MOREX.r3.7HG0635200
Gene Name
Pfam domain motif Glyco_hydro_32N
Motif E-value 4.90E-97
Motif start 123
Motif end 438
Protein seq >HORVU.MOREX.r3.7HG0635200.1
MAPRGRRTSRSKDFLLSSGTAAVAVKPRGAVLDTPPVPLAYGVLKYQQSGGGTRWRECTVVLGAVAMVALFVTHALAPRA
SVLSEETRGAARPEQNIMVAAGSDADGFPWSNEMLQWQRTGFHFQPEKNYMNDPNAPMYYRGRHHFFYQYNPTGVVWGNI
TWGHAVSRDLVHWRHLPLAMVPDQWYDIHGVLTGSATILPNGTVIVLYTGKTDTSAQVQCLAMPTDPDDPLLVNWTKHPA
NPVILPPPGIGLQDFRDPTTAWFDNSDLTWRTIIGSKDDNGHAGIALMYKTKDFIRYELIQGVLHRVEGTGMWECVDFYP
VGGGNSSSEEEAMYVLKASMDDERHDYYALGRYDAATNTWTPLDPELDVGIGLRYDWGKFFAATSFYDPVKRRRVMWAYV
GETDSLSADVAKGWASVQTIPRTVVLDEKTRTNLLQWPVEEIETLRFNSTDFGVITIHTGSIIPLCLRQATQLDIEASFR
LDDSAIAMINEADVNYNCSTSSGASTMGALGPFGLLIHAAANGGSEQLAVYFHVSRGLDGALRTHFCHDELLSSRASDVM
KRVVGSTVPVLDGEALCVRVLVDHSIVESFAMGGRLTATSRVYPMEAIHTAAGVYLFNNATGSSITVEKLVVHEMASTS*
CDS seq >HORVU.MOREX.r3.7HG0635200.1
ATGGCTCCACGAGGCCGCAGGACGAGCCGATCAAAAGATTTCCTCTTGAGCTCCGGAACAGCGGCCGTGGCCGTGAAGCC
ACGCGGCGCCGTCCTGGACACGCCGCCGGTCCCGTTGGCGTACGGGGTGCTGAAGTACCAGCAAAGCGGCGGCGGCACGA
GGTGGCGCGAGTGCACCGTCGTGCTGGGCGCCGTGGCCATGGTGGCGCTCTTCGTCACCCACGCGCTCGCCCCAAGGGCC
AGCGTGTTGTCCGAGGAGACGCGCGGGGCGGCACGACCGGAGCAGAACATCATGGTCGCCGCCGGCTCCGATGCCGACGG
GTTCCCGTGGAGCAACGAGATGCTGCAGTGGCAGCGCACCGGGTTCCATTTCCAGCCGGAGAAGAACTACATGAACGATC
CAAACGCTCCAATGTATTACCGTGGACGGCACCACTTCTTCTACCAGTACAACCCTACGGGCGTCGTCTGGGGCAACATC
ACATGGGGCCACGCCGTGTCGAGGGACCTGGTCCACTGGCGCCACCTCCCCCTCGCCATGGTGCCGGATCAATGGTACGA
CATCCACGGCGTCTTGACGGGCTCCGCCACCATTCTCCCCAACGGCACCGTCATCGTGCTTTACACGGGTAAAACCGACA
CCTCTGCTCAAGTTCAGTGCCTCGCCATGCCCACTGACCCGGATGACCCACTCCTTGTCAACTGGACCAAGCATCCTGCC
AACCCCGTCATCCTCCCACCCCCCGGCATCGGCCTCCAGGACTTCCGCGACCCCACCACCGCATGGTTCGATAATTCCGA
CCTGACATGGCGCACCATCATCGGCTCCAAGGACGACAACGGCCATGCCGGCATCGCCTTGATGTACAAGACCAAAGACT
TCATCAGGTACGAGCTCATCCAGGGGGTGCTCCACCGCGTCGAGGGCACCGGAATGTGGGAGTGCGTCGACTTCTACCCT
GTCGGCGGCGGCAACAGCTCCTCGGAGGAGGAGGCGATGTATGTGTTGAAGGCGAGCATGGACGATGAACGCCATGACTA
CTACGCGTTGGGGAGGTATGATGCGGCGACCAACACGTGGACGCCATTGGACCCGGAGCTGGACGTGGGGATCGGGCTGA
GGTACGATTGGGGAAAGTTTTTTGCTGCCACCTCTTTCTATGACCCGGTGAAACGGCGGCGCGTGATGTGGGCTTATGTC
GGCGAGACCGACTCCTTGAGTGCCGACGTTGCCAAGGGATGGGCTTCGGTCCAGACAATTCCGAGGACGGTGGTGTTGGA
TGAGAAGACCCGGACGAACCTCCTCCAATGGCCGGTGGAGGAGATCGAGACGCTCCGCTTCAACAGCACTGACTTTGGCG
TCATCACCATCCACACTGGATCCATCATCCCTCTCTGCCTCCGTCAAGCAACTCAGCTTGATATCGAGGCGTCCTTTCGC
CTAGACGATTCCGCCATTGCCATGATCAACGAGGCCGACGTGAACTACAACTGCAGCACGAGTAGCGGAGCCTCAACCAT
GGGCGCACTTGGTCCCTTCGGCCTCCTCATCCACGCCGCTGCCAACGGTGGCAGCGAACAACTAGCGGTTTACTTCCATG
TGTCAAGGGGCCTCGATGGGGCACTCCGAACCCACTTCTGCCATGACGAGCTGTTGTCGTCCCGGGCGAGTGATGTCATG
AAGCGGGTGGTTGGCAGCACTGTGCCGGTGCTCGACGGTGAGGCTCTATGTGTGAGGGTGCTCGTGGACCATTCCATCGT
AGAGAGCTTTGCGATGGGCGGTAGGTTGACAGCGACGTCACGGGTGTACCCGATGGAAGCCATCCACACGGCGGCGGGGG
TGTACCTTTTCAACAACGCCACTGGATCCTCCATCACCGTCGAGAAGCTTGTAGTTCATGAGATGGCCTCGACGTCTTAG
Hv_7H:2630004-2630012:- does not have available information here.