
Microexon ID | Hv_7H:2630004-2630012:- |
Species | Hordeum Vulgare | Coordinates | 7H:2630004..2630012 |
Microexon Cluster ID | MEP22 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | Glyco_hydro_32N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | YSKYAMMGRACYGSYTWYCAYTTYCARCCYSMCAARAAYTGGATGAAYGATCCYAAYGGTCCAATGTWYTACAAGGGATKGTACCAYYTSTTCTAYCARTACAAYCCV |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | ATCCAAACG |
Microexon Amino Acid seq | DPNA |
Microexon-tag DNA Seq | TGGCAGCGCACCGGGTTCCATTTCCAGCCGGAGAAGAACTACATGAACGATCCAAACGCTCCAATGTATTACCGTGGACGGCACCACTTCTTCTACCAGTACAACCCT |
Microexon-tag Amino Acid Seq | WQRTGFHFQPEKNYMNDPNAPMYYRGRHHFFYQYNP |
Microexon-tag spanning region | 2629851-2630260 |
Microexon-tag prediction score | 0.9504 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | HORVU.MOREX.r3.7HG0635200.1x |
Reference Transcript ID | HORVU.MOREX.r3.7HG0635200.1 |
Gene ID | HORVU.MOREX.r3.7HG0635200 |
Gene Name | NA |
Transcript ID | HORVU.MOREX.r3.7HG0635200.1 |
Protein ID | |
Gene ID | HORVU.MOREX.r3.7HG0635200 |
Gene Name | |
Pfam domain motif | Glyco_hydro_32N |
Motif E-value | 4.90E-97 |
Motif start | 123 |
Motif end | 438 |
Protein seq | >HORVU.MOREX.r3.7HG0635200.1 MAPRGRRTSRSKDFLLSSGTAAVAVKPRGAVLDTPPVPLAYGVLKYQQSGGGTRWRECTVVLGAVAMVALFVTHALAPRA SVLSEETRGAARPEQNIMVAAGSDADGFPWSNEMLQWQRTGFHFQPEKNYMNDPNAPMYYRGRHHFFYQYNPTGVVWGNI TWGHAVSRDLVHWRHLPLAMVPDQWYDIHGVLTGSATILPNGTVIVLYTGKTDTSAQVQCLAMPTDPDDPLLVNWTKHPA NPVILPPPGIGLQDFRDPTTAWFDNSDLTWRTIIGSKDDNGHAGIALMYKTKDFIRYELIQGVLHRVEGTGMWECVDFYP VGGGNSSSEEEAMYVLKASMDDERHDYYALGRYDAATNTWTPLDPELDVGIGLRYDWGKFFAATSFYDPVKRRRVMWAYV GETDSLSADVAKGWASVQTIPRTVVLDEKTRTNLLQWPVEEIETLRFNSTDFGVITIHTGSIIPLCLRQATQLDIEASFR LDDSAIAMINEADVNYNCSTSSGASTMGALGPFGLLIHAAANGGSEQLAVYFHVSRGLDGALRTHFCHDELLSSRASDVM KRVVGSTVPVLDGEALCVRVLVDHSIVESFAMGGRLTATSRVYPMEAIHTAAGVYLFNNATGSSITVEKLVVHEMASTS* |
CDS seq | >HORVU.MOREX.r3.7HG0635200.1 ATGGCTCCACGAGGCCGCAGGACGAGCCGATCAAAAGATTTCCTCTTGAGCTCCGGAACAGCGGCCGTGGCCGTGAAGCC ACGCGGCGCCGTCCTGGACACGCCGCCGGTCCCGTTGGCGTACGGGGTGCTGAAGTACCAGCAAAGCGGCGGCGGCACGA GGTGGCGCGAGTGCACCGTCGTGCTGGGCGCCGTGGCCATGGTGGCGCTCTTCGTCACCCACGCGCTCGCCCCAAGGGCC AGCGTGTTGTCCGAGGAGACGCGCGGGGCGGCACGACCGGAGCAGAACATCATGGTCGCCGCCGGCTCCGATGCCGACGG GTTCCCGTGGAGCAACGAGATGCTGCAGTGGCAGCGCACCGGGTTCCATTTCCAGCCGGAGAAGAACTACATGAACGATC CAAACGCTCCAATGTATTACCGTGGACGGCACCACTTCTTCTACCAGTACAACCCTACGGGCGTCGTCTGGGGCAACATC ACATGGGGCCACGCCGTGTCGAGGGACCTGGTCCACTGGCGCCACCTCCCCCTCGCCATGGTGCCGGATCAATGGTACGA CATCCACGGCGTCTTGACGGGCTCCGCCACCATTCTCCCCAACGGCACCGTCATCGTGCTTTACACGGGTAAAACCGACA CCTCTGCTCAAGTTCAGTGCCTCGCCATGCCCACTGACCCGGATGACCCACTCCTTGTCAACTGGACCAAGCATCCTGCC AACCCCGTCATCCTCCCACCCCCCGGCATCGGCCTCCAGGACTTCCGCGACCCCACCACCGCATGGTTCGATAATTCCGA CCTGACATGGCGCACCATCATCGGCTCCAAGGACGACAACGGCCATGCCGGCATCGCCTTGATGTACAAGACCAAAGACT TCATCAGGTACGAGCTCATCCAGGGGGTGCTCCACCGCGTCGAGGGCACCGGAATGTGGGAGTGCGTCGACTTCTACCCT GTCGGCGGCGGCAACAGCTCCTCGGAGGAGGAGGCGATGTATGTGTTGAAGGCGAGCATGGACGATGAACGCCATGACTA CTACGCGTTGGGGAGGTATGATGCGGCGACCAACACGTGGACGCCATTGGACCCGGAGCTGGACGTGGGGATCGGGCTGA GGTACGATTGGGGAAAGTTTTTTGCTGCCACCTCTTTCTATGACCCGGTGAAACGGCGGCGCGTGATGTGGGCTTATGTC GGCGAGACCGACTCCTTGAGTGCCGACGTTGCCAAGGGATGGGCTTCGGTCCAGACAATTCCGAGGACGGTGGTGTTGGA TGAGAAGACCCGGACGAACCTCCTCCAATGGCCGGTGGAGGAGATCGAGACGCTCCGCTTCAACAGCACTGACTTTGGCG TCATCACCATCCACACTGGATCCATCATCCCTCTCTGCCTCCGTCAAGCAACTCAGCTTGATATCGAGGCGTCCTTTCGC CTAGACGATTCCGCCATTGCCATGATCAACGAGGCCGACGTGAACTACAACTGCAGCACGAGTAGCGGAGCCTCAACCAT GGGCGCACTTGGTCCCTTCGGCCTCCTCATCCACGCCGCTGCCAACGGTGGCAGCGAACAACTAGCGGTTTACTTCCATG TGTCAAGGGGCCTCGATGGGGCACTCCGAACCCACTTCTGCCATGACGAGCTGTTGTCGTCCCGGGCGAGTGATGTCATG AAGCGGGTGGTTGGCAGCACTGTGCCGGTGCTCGACGGTGAGGCTCTATGTGTGAGGGTGCTCGTGGACCATTCCATCGT AGAGAGCTTTGCGATGGGCGGTAGGTTGACAGCGACGTCACGGGTGTACCCGATGGAAGCCATCCACACGGCGGCGGGGG TGTACCTTTTCAACAACGCCACTGGATCCTCCATCACCGTCGAGAAGCTTGTAGTTCATGAGATGGCCTCGACGTCTTAG |
Hv_7H:2630004-2630012:- does not have available information here.