Microexon ID Hv_7H:2586829-2586837:-
Species Hordeum   Vulgare
Coordinates 7H:2586829..2586837
Microexon Cluster ID MEP22
Size 9
Phase 1
Pfam Domain Motif Glyco_hydro_32N
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 49,9,50
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq YSKYAMMGRACYGSYTWYCAYTTYCARCCYSMCAARAAYTGGATGAAYGATCCYAAYGGTCCAATGTWYTACAAGGGATKGTACCAYYTSTTCTAYCARTACAAYCCV
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq ATCCCAACG
Microexon Amino Acid seq DPNG
Microexon-tag DNA Seq TGGCAGCGCACCGGCTTCCATTTCCAGCCGGACAAGTACTACCAGAACGATCCCAACGGTCCGGTGTACTACGGCGGATGGTACCACTTCTTCTACCAGTACAACCCG
Microexon-tag Amino Acid Seq WQRTGFHFQPDKYYQNDPNGPVYYGGWYHFFYQYNP
Microexon-tag spanning region2586639-2587010
Microexon-tag prediction score0.9534
Overlapped with the annotated transcript (%) 100
New Transcript ID HORVU.MOREX.r3.7HG0635170.1x
Reference Transcript ID HORVU.MOREX.r3.7HG0635170.1
Gene ID HORVU.MOREX.r3.7HG0635170
Gene Name NA
Transcript ID HORVU.MOREX.r3.7HG0635170.1
Protein ID
Gene ID HORVU.MOREX.r3.7HG0635170
Gene Name
Pfam domain motif Glyco_hydro_32N
Motif E-value 1.20E-88
Motif start 126
Motif end 449
Protein seq >HORVU.MOREX.r3.7HG0635170.1
MDSSRVILIPGTPPLPYAYEQLPSSSADANGQEEQRAGGGLRWRVCAAVLAASAVLALVVAAAVFGAGVAGRDAVAGSVP
AIPATEFPRSRGKEHGVSEKTSGAYSANGGFPWSNAMLQWQRTGFHFQPDKYYQNDPNGPVYYGGWYHFFYQYNPSGSVW
EPQIVWGHAVSKDLIHWRHLPPALVPDQWYDIKGVLTGSITVLPDGKVILLYTGNTETFAQVTCLAEPADPSDPLLREWV
KHPANPVVFPPPGIGMKDFRDPTTAWFDASDGTWRTIIGSKNDTDHSGIVFSYKTKDFVSYELMPGYMYRGPKGTGEYEC
IDLYAVGGGSKASDMYNSTAEDVLYVLKESSDDDRHDWYSLGRFDAAANKWTPIDDELELGVGLRYDWGKYYASKSFYDP
VKKRRVVWAYVGETDSERADITKGWANLQSIPRTVELDEKTRTNLIQWPVEELDTLRINTTDLSGITVGAGSVVPLHLHQ
TAQLDIEATFHIDASAIEAVNEADVSYNCTTSSGAATRGALGPFGLLVLANRALTEQTGVYFYVSKGLDGALRTHFCHDE
LRSSHASDVVKRVVGSTVPVLDGEDFSVRVLVDHSIVQSFAMGGRLTATSRAYPTEAIYAAAGVYLFNNATGTSVTAEKL
IVHDMDSSYNHIYTDDDLVVVG*
CDS seq >HORVU.MOREX.r3.7HG0635170.1
ATGGATTCCTCTCGCGTCATTCTCATCCCCGGCACGCCGCCGCTGCCCTACGCCTACGAGCAGCTGCCCTCCTCCTCCGC
CGACGCCAATGGCCAGGAGGAGCAGCGGGCCGGCGGTGGCCTGAGGTGGCGCGTGTGCGCCGCCGTGCTTGCCGCCTCGG
CCGTGCTGGCGCTCGTCGTCGCCGCCGCGGTCTTCGGGGCCGGTGTGGCGGGCCGTGACGCGGTGGCCGGCTCCGTGCCG
GCCATTCCGGCGACGGAGTTCCCGAGGAGCAGGGGCAAGGAGCACGGCGTGTCGGAGAAGACATCGGGGGCCTACTCCGC
CAACGGCGGCTTCCCGTGGAGCAACGCCATGCTGCAGTGGCAGCGCACCGGCTTCCATTTCCAGCCGGACAAGTACTACC
AGAACGATCCCAACGGTCCGGTGTACTACGGCGGATGGTACCACTTCTTCTACCAGTACAACCCGTCGGGGTCGGTGTGG
GAGCCGCAGATAGTGTGGGGCCACGCCGTGTCCAAGGACCTGATCCACTGGCGCCACCTCCCGCCGGCCTTGGTGCCGGA
CCAGTGGTACGACATCAAGGGCGTGCTCACCGGCTCCATCACCGTGCTCCCCGACGGCAAGGTCATCCTCCTCTACACCG
GCAACACCGAGACCTTCGCTCAGGTGACCTGCCTCGCCGAGCCGGCCGACCCGAGCGACCCGCTCCTCCGCGAGTGGGTG
AAGCACCCGGCGAACCCCGTCGTGTTCCCGCCGCCGGGCATCGGGATGAAGGACTTCCGCGACCCCACGACGGCGTGGTT
CGACGCCTCCGACGGCACGTGGCGCACCATCATCGGGTCCAAGAACGACACCGACCACTCGGGCATCGTCTTCTCGTACA
AGACGAAGGACTTCGTGAGCTACGAGCTGATGCCAGGGTACATGTACCGCGGGCCCAAGGGCACCGGCGAGTACGAGTGC
ATCGACCTCTACGCCGTCGGGGGCGGCAGCAAGGCCAGCGACATGTACAACTCGACGGCGGAGGACGTGCTGTACGTGCT
CAAGGAGAGCAGCGACGACGACCGGCACGACTGGTACTCGCTCGGCCGGTTCGACGCCGCCGCCAACAAGTGGACGCCGA
TCGACGACGAGCTCGAGCTCGGCGTCGGGCTACGGTACGACTGGGGAAAGTACTACGCGTCCAAGTCATTCTACGACCCC
GTGAAGAAGCGGCGCGTCGTGTGGGCGTACGTCGGCGAGACCGACTCGGAGCGCGCCGACATCACCAAGGGCTGGGCCAA
CCTCCAGTCGATTCCGAGGACGGTGGAGCTTGACGAGAAGACCCGGACGAACCTCATCCAATGGCCGGTGGAGGAACTCG
ACACCCTCCGCATCAACACCACCGATCTCAGTGGCATCACTGTCGGCGCCGGCTCCGTTGTCCCCCTCCACCTCCACCAG
ACCGCTCAGCTCGACATCGAGGCAACCTTCCACATTGACGCCTCCGCCATCGAGGCCGTCAATGAGGCAGATGTCAGCTA
CAACTGCACCACCAGCAGTGGCGCCGCCACCCGCGGTGCCCTTGGACCCTTCGGTCTCCTCGTCCTCGCCAACCGCGCCC
TGACCGAACAGACGGGGGTGTACTTCTATGTGTCCAAGGGCCTCGACGGCGCTCTTCGGACTCACTTCTGCCACGACGAG
TTGCGATCATCACATGCTAGCGATGTGGTGAAGCGGGTGGTGGGTAGCACAGTGCCGGTGCTCGACGGCGAGGACTTTTC
TGTCCGGGTGCTCGTGGACCACTCCATTGTCCAAAGCTTCGCGATGGGTGGGAGGTTGACGGCGACGTCGAGGGCGTACC
CGACCGAGGCCATCTATGCGGCGGCGGGGGTCTACCTGTTCAACAATGCCACCGGCACGAGCGTCACCGCTGAGAAACTC
ATCGTGCACGATATGGACTCGTCGTACAACCATATATACACAGACGACGACTTGGTAGTCGTCGGTTAG
Hv_7H:2586829-2586837:- does not have available information here.