
Microexon ID | Hv_3H:10646089-10646097:+ |
Species | Hordeum Vulgare | Coordinates | 3H:10646089..10646097 |
Microexon Cluster ID | MEP22 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | Glyco_hydro_32N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | YSKYAMMGRACYGSYTWYCAYTTYCARCCYSMCAARAAYTGGATGAAYGATCCYAAYGGTCCAATGTWYTACAAGGGATKGTACCAYYTSTTCTAYCARTACAAYCCV |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | ATCCGAATG |
Microexon Amino Acid seq | DPNG |
Microexon-tag DNA Seq | GAGCTGCGCACGGGGTACCACTTCCAGCCGCCAAAGCACTGGATCAATGATCCGAATGGGCCAATGTACTACAAGGGGCTGTACCATCTCTTCTACCAGTACAACCCC |
Microexon-tag Amino Acid Seq | ELRTGYHFQPPKHWINDPNGPMYYKGLYHLFYQYNP |
Microexon-tag spanning region | 10645899-10646320 |
Microexon-tag prediction score | 0.9677 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | HORVU.MOREX.r3.3HG0223820.1x |
Reference Transcript ID | HORVU.MOREX.r3.3HG0223820.1 |
Gene ID | HORVU.MOREX.r3.3HG0223820 |
Gene Name | NA |
Transcript ID | HORVU.MOREX.r3.3HG0223820.1 |
Protein ID | |
Gene ID | HORVU.MOREX.r3.3HG0223820 |
Gene Name | |
Pfam domain motif | Glyco_hydro_32N |
Motif E-value | 4.30E-104 |
Motif start | 48 |
Motif end | 374 |
Protein seq | >HORVU.MOREX.r3.3HG0223820.1 MGTAAALAIVSVLCWAALAAVRGSHVVYPELQSLEAKEVATELRTGYHFQPPKHWINDPNGPMYYKGLYHLFYQYNPKGA VWGNIIWAHSVSTDLIHWVALQPAIYPTRPFDVNGCWSGSVTMLPNGVPVIMYTGIDPHKHQVQNVAYPANLSDPFLREW VKPDYNPIIIPDRDINASAFRDPTTAWYGPDGHWRLVVGSKENMRGTAVLYRSRDFKKWIKARHSLHAGLTGMWECPDFF PVAVAGGSRHHQSGVDTAELHNRVVAEEVKYVLKVSLELTRYDYYTVGTYDHDKERYTPDPAFPDNDYGLRYDYGDFYAS KSFFDPAKKRRVLWGWANESDTVVDDQHKGWAGIQAMPRKIFLSRSGAQLIQWPVEEVKSLRAKHVNVSNKAIKSGKYFE VTGFKSVQSDMEAVFVIRNLDKAEKFDPSWRTNAQGLCKNFNSHVKGGVGPFGLWVLASDDLEERTAVFFRVFKTNDTNY VVLMCNDPTRSSYESQIYRPTFAGFVNVDIAKTKTITLRTLIDHSVVESFGAGGRTCILTRVYPKKAIGDDAHLFVFNNG ESDIKVTNLHAWEMKTPTMNKLLEQ* |
CDS seq | >HORVU.MOREX.r3.3HG0223820.1 ATGGGGACGGCGGCGGCGCTGGCGATCGTATCGGTGCTGTGCTGGGCGGCTCTGGCGGCGGTGCGCGGGTCGCACGTCGT CTACCCGGAGCTCCAGTCGCTGGAGGCCAAGGAGGTCGCCACGGAGCTGCGCACGGGGTACCACTTCCAGCCGCCAAAGC ACTGGATCAATGATCCGAATGGGCCAATGTACTACAAGGGGCTGTACCATCTCTTCTACCAGTACAACCCCAAGGGCGCC GTGTGGGGGAACATCATCTGGGCGCACTCCGTCTCCACCGACCTCATCCACTGGGTGGCCCTCCAGCCCGCCATCTACCC CACCAGGCCATTCGACGTCAACGGCTGCTGGTCCGGCTCCGTCACCATGCTGCCCAACGGCGTCCCCGTCATCATGTACA CCGGCATCGACCCCCACAAGCACCAAGTGCAGAACGTTGCCTACCCTGCCAACCTCTCCGACCCCTTCCTCCGTGAGTGG GTCAAGCCGGACTACAACCCCATCATCATCCCCGACCGCGACATCAACGCGAGCGCATTTCGAGATCCTACGACGGCCTG GTACGGGCCTGACGGACACTGGAGGTTGGTGGTGGGCAGCAAGGAGAACATGAGAGGAACTGCGGTGTTATACAGGAGCC GAGACTTCAAGAAGTGGATCAAGGCACGCCACTCGTTGCACGCAGGGCTCACCGGAATGTGGGAATGTCCGGATTTCTTC CCTGTGGCGGTGGCCGGAGGCAGCCGTCATCACCAGAGCGGCGTGGACACCGCGGAGTTGCACAACCGTGTTGTGGCCGA GGAGGTCAAGTACGTGCTCAAGGTGAGTCTAGAGCTGACACGATACGATTACTACACCGTCGGCACCTACGACCACGACA AGGAGAGGTACACCCCAGACCCTGCCTTCCCGGACAACGACTATGGCCTCCGCTACGACTACGGTGACTTCTATGCATCG AAGTCCTTCTTCGACCCGGCCAAGAAACGTCGTGTGCTCTGGGGCTGGGCCAATGAGTCTGACACCGTCGTCGACGACCA ACACAAGGGCTGGGCCGGCATCCAGGCGATGCCAAGGAAGATCTTCCTGTCGCGAAGCGGGGCGCAGCTGATCCAGTGGC CAGTGGAGGAGGTCAAATCACTACGCGCGAAGCACGTCAATGTCAGCAACAAGGCCATCAAAAGCGGCAAGTACTTTGAG GTCACGGGCTTCAAATCCGTGCAGTCGGACATGGAGGCGGTGTTCGTGATAAGAAACCTGGACAAGGCAGAGAAGTTCGA CCCGTCGTGGCGAACCAATGCACAGGGGTTGTGCAAGAATTTCAACTCGCACGTTAAAGGTGGCGTTGGGCCGTTCGGGC TCTGGGTGCTGGCCTCCGATGACCTCGAGGAGAGGACGGCTGTCTTCTTCAGGGTGTTCAAGACCAATGACACCAACTAC GTCGTTCTCATGTGCAATGACCCGACAAGGTCGTCGTACGAGTCACAGATCTACAGACCGACCTTTGCCGGCTTCGTCAA CGTTGACATAGCAAAGACAAAGACGATCACACTAAGGACATTGATTGATCATTCTGTGGTGGAGAGCTTCGGGGCCGGCG GCAGGACGTGCATCCTGACTCGGGTTTACCCGAAGAAGGCCATCGGGGACGACGCGCACCTCTTCGTCTTCAACAACGGC GAGTCAGACATCAAGGTCACCAACCTGCACGCGTGGGAGATGAAGACCCCCACGATGAACAAGCTGCTGGAGCAGTAG |
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