Microexon ID Hv_3H:10646089-10646097:+
Species Hordeum   Vulgare
Coordinates 3H:10646089..10646097
Microexon Cluster ID MEP22
Size 9
Phase 1
Pfam Domain Motif Glyco_hydro_32N
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 49,9,50
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq YSKYAMMGRACYGSYTWYCAYTTYCARCCYSMCAARAAYTGGATGAAYGATCCYAAYGGTCCAATGTWYTACAAGGGATKGTACCAYYTSTTCTAYCARTACAAYCCV
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq ATCCGAATG
Microexon Amino Acid seq DPNG
Microexon-tag DNA Seq GAGCTGCGCACGGGGTACCACTTCCAGCCGCCAAAGCACTGGATCAATGATCCGAATGGGCCAATGTACTACAAGGGGCTGTACCATCTCTTCTACCAGTACAACCCC
Microexon-tag Amino Acid Seq ELRTGYHFQPPKHWINDPNGPMYYKGLYHLFYQYNP
Microexon-tag spanning region10645899-10646320
Microexon-tag prediction score0.9677
Overlapped with the annotated transcript (%) 100
New Transcript ID HORVU.MOREX.r3.3HG0223820.1x
Reference Transcript ID HORVU.MOREX.r3.3HG0223820.1
Gene ID HORVU.MOREX.r3.3HG0223820
Gene Name NA
Transcript ID HORVU.MOREX.r3.3HG0223820.1
Protein ID
Gene ID HORVU.MOREX.r3.3HG0223820
Gene Name
Pfam domain motif Glyco_hydro_32N
Motif E-value 4.30E-104
Motif start 48
Motif end 374
Protein seq >HORVU.MOREX.r3.3HG0223820.1
MGTAAALAIVSVLCWAALAAVRGSHVVYPELQSLEAKEVATELRTGYHFQPPKHWINDPNGPMYYKGLYHLFYQYNPKGA
VWGNIIWAHSVSTDLIHWVALQPAIYPTRPFDVNGCWSGSVTMLPNGVPVIMYTGIDPHKHQVQNVAYPANLSDPFLREW
VKPDYNPIIIPDRDINASAFRDPTTAWYGPDGHWRLVVGSKENMRGTAVLYRSRDFKKWIKARHSLHAGLTGMWECPDFF
PVAVAGGSRHHQSGVDTAELHNRVVAEEVKYVLKVSLELTRYDYYTVGTYDHDKERYTPDPAFPDNDYGLRYDYGDFYAS
KSFFDPAKKRRVLWGWANESDTVVDDQHKGWAGIQAMPRKIFLSRSGAQLIQWPVEEVKSLRAKHVNVSNKAIKSGKYFE
VTGFKSVQSDMEAVFVIRNLDKAEKFDPSWRTNAQGLCKNFNSHVKGGVGPFGLWVLASDDLEERTAVFFRVFKTNDTNY
VVLMCNDPTRSSYESQIYRPTFAGFVNVDIAKTKTITLRTLIDHSVVESFGAGGRTCILTRVYPKKAIGDDAHLFVFNNG
ESDIKVTNLHAWEMKTPTMNKLLEQ*
CDS seq >HORVU.MOREX.r3.3HG0223820.1
ATGGGGACGGCGGCGGCGCTGGCGATCGTATCGGTGCTGTGCTGGGCGGCTCTGGCGGCGGTGCGCGGGTCGCACGTCGT
CTACCCGGAGCTCCAGTCGCTGGAGGCCAAGGAGGTCGCCACGGAGCTGCGCACGGGGTACCACTTCCAGCCGCCAAAGC
ACTGGATCAATGATCCGAATGGGCCAATGTACTACAAGGGGCTGTACCATCTCTTCTACCAGTACAACCCCAAGGGCGCC
GTGTGGGGGAACATCATCTGGGCGCACTCCGTCTCCACCGACCTCATCCACTGGGTGGCCCTCCAGCCCGCCATCTACCC
CACCAGGCCATTCGACGTCAACGGCTGCTGGTCCGGCTCCGTCACCATGCTGCCCAACGGCGTCCCCGTCATCATGTACA
CCGGCATCGACCCCCACAAGCACCAAGTGCAGAACGTTGCCTACCCTGCCAACCTCTCCGACCCCTTCCTCCGTGAGTGG
GTCAAGCCGGACTACAACCCCATCATCATCCCCGACCGCGACATCAACGCGAGCGCATTTCGAGATCCTACGACGGCCTG
GTACGGGCCTGACGGACACTGGAGGTTGGTGGTGGGCAGCAAGGAGAACATGAGAGGAACTGCGGTGTTATACAGGAGCC
GAGACTTCAAGAAGTGGATCAAGGCACGCCACTCGTTGCACGCAGGGCTCACCGGAATGTGGGAATGTCCGGATTTCTTC
CCTGTGGCGGTGGCCGGAGGCAGCCGTCATCACCAGAGCGGCGTGGACACCGCGGAGTTGCACAACCGTGTTGTGGCCGA
GGAGGTCAAGTACGTGCTCAAGGTGAGTCTAGAGCTGACACGATACGATTACTACACCGTCGGCACCTACGACCACGACA
AGGAGAGGTACACCCCAGACCCTGCCTTCCCGGACAACGACTATGGCCTCCGCTACGACTACGGTGACTTCTATGCATCG
AAGTCCTTCTTCGACCCGGCCAAGAAACGTCGTGTGCTCTGGGGCTGGGCCAATGAGTCTGACACCGTCGTCGACGACCA
ACACAAGGGCTGGGCCGGCATCCAGGCGATGCCAAGGAAGATCTTCCTGTCGCGAAGCGGGGCGCAGCTGATCCAGTGGC
CAGTGGAGGAGGTCAAATCACTACGCGCGAAGCACGTCAATGTCAGCAACAAGGCCATCAAAAGCGGCAAGTACTTTGAG
GTCACGGGCTTCAAATCCGTGCAGTCGGACATGGAGGCGGTGTTCGTGATAAGAAACCTGGACAAGGCAGAGAAGTTCGA
CCCGTCGTGGCGAACCAATGCACAGGGGTTGTGCAAGAATTTCAACTCGCACGTTAAAGGTGGCGTTGGGCCGTTCGGGC
TCTGGGTGCTGGCCTCCGATGACCTCGAGGAGAGGACGGCTGTCTTCTTCAGGGTGTTCAAGACCAATGACACCAACTAC
GTCGTTCTCATGTGCAATGACCCGACAAGGTCGTCGTACGAGTCACAGATCTACAGACCGACCTTTGCCGGCTTCGTCAA
CGTTGACATAGCAAAGACAAAGACGATCACACTAAGGACATTGATTGATCATTCTGTGGTGGAGAGCTTCGGGGCCGGCG
GCAGGACGTGCATCCTGACTCGGGTTTACCCGAAGAAGGCCATCGGGGACGACGCGCACCTCTTCGTCTTCAACAACGGC
GAGTCAGACATCAAGGTCACCAACCTGCACGCGTGGGAGATGAAGACCCCCACGATGAACAAGCTGCTGGAGCAGTAG
Hv_3H:10646089-10646097:+ does not have available information here.