Microexon ID Hv_2H:569347906-569347914:+
Species Hordeum   Vulgare
Coordinates 2H:569347906..569347914
Microexon Cluster ID MEP22
Size 9
Phase 1
Pfam Domain Motif Glyco_hydro_32N
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) 49,9,50
Microexon location in the Microexon-tag 2
Microexon-tag DNA Seq YSKYAMMGRACYGSYTWYCAYTTYCARCCYSMCAARAAYTGGATGAAYGATCCYAAYGGTCCAATGTWYTACAAGGGATKGTACCAYYTSTTCTAYCARTACAAYCCV
Logo of Microexon-tag DNA Seq NT60 Logo
Alignment of exons MSA
Microexon DNA seq ATCCCAACG
Microexon Amino Acid seq DPNG
Microexon-tag DNA Seq TGGCAGCGCACGGCGTTCCATTTCCAGCCCCAGAAGAATTGGATGAACGATCCCAACGGTCCACTGTATTACAAGGGATGGTATCACCTCTTCTACCAGTGGAACCCG
Microexon-tag Amino Acid Seq WQRTAFHFQPQKNWMNDPNGPLYYKGWYHLFYQWNP
Microexon-tag spanning region569347669-569348148
Microexon-tag prediction score0.9732
Overlapped with the annotated transcript (%) 100
New Transcript ID HORVU.MOREX.r3.2HG0184450.1x
Reference Transcript ID HORVU.MOREX.r3.2HG0184450.1
Gene ID HORVU.MOREX.r3.2HG0184450
Gene Name NA
Transcript ID HORVU.MOREX.r3.2HG0184450.1
Protein ID
Gene ID HORVU.MOREX.r3.2HG0184450
Gene Name
Pfam domain motif Glyco_hydro_32N
Motif E-value 3.70E-105
Motif start 129
Motif end 452
Protein seq >HORVU.MOREX.r3.2HG0184450.1
MTPAGSAIVDDGVHDAAQIANAPLLPETNLKGRRPPARQRRPSTVLPAIAWTVLLLALAGLAVYRQGHGDGQAAALGDQV
ASAGRVVEVAASRGVVQGVSEKSTAPALLGGGAYDWTNAMLAWQRTAFHFQPQKNWMNDPNGPLYYKGWYHLFYQWNPDG
AVWGNITWGHAVSRDLVHWLHLPPAMVPDHWYDINGVWSGSATQLPDGRIVMLYTGSTEDAVQVQLLAEPADPSDPLLRR
WAKSESNPVLVPPPGIGLTDFRDPTTAWLNPTDRAWRITIGSKNQEHAGLALVYRTEDFLHYDLLPALLHVVQGTGMWEC
VDFYPVSADLAADVGLDTSTAPGPGVKHVLKASLDDDRHDYYGIGTYDAGTDRWTPDDAAIDVGIGLRYDYGKFYASKSF
YDPVGRRRVLWGWIGESDSERADVLKGWASLQSIPRTVLLDTKTGSNLLQWPVVEVENLRMRGKLFDGLDMPPGSVVPLD
VGRATQLDVEAVFQVQAGAPAAGSAAAGAEAPYNCSASAGSAGRGLLGPFGLLVLADDGLSEQTAVYFYLVRGADGKLST
HFCQDAFRSSKANDLVKAVYGSSVPVLDGEDLSVRILVDHSIVESFAQGGRTCITSRVYPTKAIYDSARVFLFNNATNLN
VTAKSIKIWELNSAYIRPYPYSD*
CDS seq >HORVU.MOREX.r3.2HG0184450.1
ATGACCCCGGCCGGTTCGGCGATCGTGGACGACGGCGTCCACGACGCCGCCCAGATCGCGAACGCGCCGCTGCTTCCCGA
GACCAACCTTAAGGGTCGGCGCCCTCCGGCACGGCAGAGGCGGCCGTCGACCGTTCTCCCGGCCATCGCGTGGACCGTGC
TCCTCCTCGCGCTCGCCGGCCTCGCCGTCTACAGGCAAGGGCATGGCGACGGCCAGGCCGCCGCGCTGGGAGACCAGGTC
GCGTCCGCGGGCCGCGTCGTGGAGGTGGCGGCCTCCCGCGGCGTCGTGCAGGGCGTGTCGGAGAAGTCCACCGCCCCGGC
GCTCCTCGGCGGCGGCGCCTACGACTGGACCAACGCGATGCTGGCGTGGCAGCGCACGGCGTTCCATTTCCAGCCCCAGA
AGAATTGGATGAACGATCCCAACGGTCCACTGTATTACAAGGGATGGTATCACCTCTTCTACCAGTGGAACCCGGACGGG
GCGGTGTGGGGGAACATCACGTGGGGCCACGCCGTGTCGCGCGACCTCGTCCACTGGCTCCACCTGCCGCCGGCCATGGT
GCCCGACCACTGGTACGACATCAACGGCGTCTGGAGCGGCTCGGCGACGCAGCTCCCAGACGGCAGGATCGTCATGCTCT
ACACCGGCTCCACGGAGGACGCCGTGCAGGTGCAGCTCCTGGCCGAGCCGGCGGACCCGTCGGACCCGCTGCTGCGGCGC
TGGGCCAAGTCGGAGTCGAACCCCGTCCTCGTGCCGCCGCCGGGCATCGGGCTGACGGACTTCCGCGACCCGACGACGGC
GTGGCTCAACCCGACCGACAGGGCCTGGCGGATCACCATCGGGTCCAAGAACCAGGAGCACGCCGGGCTGGCGCTGGTGT
ACAGGACGGAGGACTTCCTGCACTACGACCTGCTGCCGGCGCTGCTGCACGTCGTGCAGGGCACCGGGATGTGGGAGTGC
GTGGACTTCTACCCGGTGTCCGCCGACCTCGCCGCCGACGTGGGGCTCGACACCTCCACCGCGCCGGGGCCGGGGGTGAA
GCACGTGCTCAAGGCCAGCCTCGACGACGACCGGCACGACTACTACGGCATCGGCACCTACGACGCCGGCACCGACCGGT
GGACGCCCGACGACGCGGCGATCGACGTCGGGATCGGGCTCCGGTACGACTACGGCAAGTTCTACGCGTCCAAGTCCTTC
TACGACCCCGTGGGGCGGCGGCGCGTGCTCTGGGGCTGGATCGGCGAGTCCGACAGCGAGCGCGCCGACGTCCTCAAGGG
CTGGGCGTCCCTCCAGTCGATCCCGAGGACGGTTCTCCTGGACACGAAGACGGGCAGCAACCTGCTGCAGTGGCCGGTGG
TGGAGGTGGAGAACCTCCGAATGCGCGGCAAGCTTTTCGACGGCCTCGACATGCCGCCCGGCTCCGTCGTGCCATTGGAC
GTCGGCAGAGCGACACAGCTGGACGTCGAGGCGGTCTTCCAGGTGCAGGCGGGCGCGCCGGCTGCCGGGAGCGCGGCGGC
GGGGGCGGAAGCGCCGTACAACTGCAGCGCGAGCGCCGGCTCGGCGGGGCGGGGCTTGCTCGGCCCATTCGGTCTGCTCG
TGCTGGCCGACGACGGCCTGTCGGAGCAGACCGCCGTCTACTTCTACCTGGTCAGGGGCGCGGACGGGAAGCTCAGCACT
CACTTCTGCCAAGATGCCTTCAGGTCATCCAAGGCGAACGATCTCGTTAAGGCCGTTTACGGCAGCTCTGTCCCCGTGCT
CGATGGAGAAGACCTGTCAGTGAGAATACTGGTTGATCACTCCATCGTGGAGAGCTTTGCTCAGGGTGGGAGGACATGCA
TTACGTCGCGCGTGTACCCTACGAAGGCAATCTACGACTCTGCTAGAGTTTTCCTCTTCAACAACGCTACGAATCTAAAT
GTCACCGCAAAATCGATCAAGATCTGGGAGCTGAATTCAGCCTACATCCGTCCATATCCATATTCAGATTGA
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