
Microexon ID | Hv_2H:569347906-569347914:+ |
Species | Hordeum Vulgare | Coordinates | 2H:569347906..569347914 |
Microexon Cluster ID | MEP22 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | Glyco_hydro_32N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | YSKYAMMGRACYGSYTWYCAYTTYCARCCYSMCAARAAYTGGATGAAYGATCCYAAYGGTCCAATGTWYTACAAGGGATKGTACCAYYTSTTCTAYCARTACAAYCCV |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | ATCCCAACG |
Microexon Amino Acid seq | DPNG |
Microexon-tag DNA Seq | TGGCAGCGCACGGCGTTCCATTTCCAGCCCCAGAAGAATTGGATGAACGATCCCAACGGTCCACTGTATTACAAGGGATGGTATCACCTCTTCTACCAGTGGAACCCG |
Microexon-tag Amino Acid Seq | WQRTAFHFQPQKNWMNDPNGPLYYKGWYHLFYQWNP |
Microexon-tag spanning region | 569347669-569348148 |
Microexon-tag prediction score | 0.9732 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | HORVU.MOREX.r3.2HG0184450.1x |
Reference Transcript ID | HORVU.MOREX.r3.2HG0184450.1 |
Gene ID | HORVU.MOREX.r3.2HG0184450 |
Gene Name | NA |
Transcript ID | HORVU.MOREX.r3.2HG0184450.1 |
Protein ID | |
Gene ID | HORVU.MOREX.r3.2HG0184450 |
Gene Name | |
Pfam domain motif | Glyco_hydro_32N |
Motif E-value | 3.70E-105 |
Motif start | 129 |
Motif end | 452 |
Protein seq | >HORVU.MOREX.r3.2HG0184450.1 MTPAGSAIVDDGVHDAAQIANAPLLPETNLKGRRPPARQRRPSTVLPAIAWTVLLLALAGLAVYRQGHGDGQAAALGDQV ASAGRVVEVAASRGVVQGVSEKSTAPALLGGGAYDWTNAMLAWQRTAFHFQPQKNWMNDPNGPLYYKGWYHLFYQWNPDG AVWGNITWGHAVSRDLVHWLHLPPAMVPDHWYDINGVWSGSATQLPDGRIVMLYTGSTEDAVQVQLLAEPADPSDPLLRR WAKSESNPVLVPPPGIGLTDFRDPTTAWLNPTDRAWRITIGSKNQEHAGLALVYRTEDFLHYDLLPALLHVVQGTGMWEC VDFYPVSADLAADVGLDTSTAPGPGVKHVLKASLDDDRHDYYGIGTYDAGTDRWTPDDAAIDVGIGLRYDYGKFYASKSF YDPVGRRRVLWGWIGESDSERADVLKGWASLQSIPRTVLLDTKTGSNLLQWPVVEVENLRMRGKLFDGLDMPPGSVVPLD VGRATQLDVEAVFQVQAGAPAAGSAAAGAEAPYNCSASAGSAGRGLLGPFGLLVLADDGLSEQTAVYFYLVRGADGKLST HFCQDAFRSSKANDLVKAVYGSSVPVLDGEDLSVRILVDHSIVESFAQGGRTCITSRVYPTKAIYDSARVFLFNNATNLN VTAKSIKIWELNSAYIRPYPYSD* |
CDS seq | >HORVU.MOREX.r3.2HG0184450.1 ATGACCCCGGCCGGTTCGGCGATCGTGGACGACGGCGTCCACGACGCCGCCCAGATCGCGAACGCGCCGCTGCTTCCCGA GACCAACCTTAAGGGTCGGCGCCCTCCGGCACGGCAGAGGCGGCCGTCGACCGTTCTCCCGGCCATCGCGTGGACCGTGC TCCTCCTCGCGCTCGCCGGCCTCGCCGTCTACAGGCAAGGGCATGGCGACGGCCAGGCCGCCGCGCTGGGAGACCAGGTC GCGTCCGCGGGCCGCGTCGTGGAGGTGGCGGCCTCCCGCGGCGTCGTGCAGGGCGTGTCGGAGAAGTCCACCGCCCCGGC GCTCCTCGGCGGCGGCGCCTACGACTGGACCAACGCGATGCTGGCGTGGCAGCGCACGGCGTTCCATTTCCAGCCCCAGA AGAATTGGATGAACGATCCCAACGGTCCACTGTATTACAAGGGATGGTATCACCTCTTCTACCAGTGGAACCCGGACGGG GCGGTGTGGGGGAACATCACGTGGGGCCACGCCGTGTCGCGCGACCTCGTCCACTGGCTCCACCTGCCGCCGGCCATGGT GCCCGACCACTGGTACGACATCAACGGCGTCTGGAGCGGCTCGGCGACGCAGCTCCCAGACGGCAGGATCGTCATGCTCT ACACCGGCTCCACGGAGGACGCCGTGCAGGTGCAGCTCCTGGCCGAGCCGGCGGACCCGTCGGACCCGCTGCTGCGGCGC TGGGCCAAGTCGGAGTCGAACCCCGTCCTCGTGCCGCCGCCGGGCATCGGGCTGACGGACTTCCGCGACCCGACGACGGC GTGGCTCAACCCGACCGACAGGGCCTGGCGGATCACCATCGGGTCCAAGAACCAGGAGCACGCCGGGCTGGCGCTGGTGT ACAGGACGGAGGACTTCCTGCACTACGACCTGCTGCCGGCGCTGCTGCACGTCGTGCAGGGCACCGGGATGTGGGAGTGC GTGGACTTCTACCCGGTGTCCGCCGACCTCGCCGCCGACGTGGGGCTCGACACCTCCACCGCGCCGGGGCCGGGGGTGAA GCACGTGCTCAAGGCCAGCCTCGACGACGACCGGCACGACTACTACGGCATCGGCACCTACGACGCCGGCACCGACCGGT GGACGCCCGACGACGCGGCGATCGACGTCGGGATCGGGCTCCGGTACGACTACGGCAAGTTCTACGCGTCCAAGTCCTTC TACGACCCCGTGGGGCGGCGGCGCGTGCTCTGGGGCTGGATCGGCGAGTCCGACAGCGAGCGCGCCGACGTCCTCAAGGG CTGGGCGTCCCTCCAGTCGATCCCGAGGACGGTTCTCCTGGACACGAAGACGGGCAGCAACCTGCTGCAGTGGCCGGTGG TGGAGGTGGAGAACCTCCGAATGCGCGGCAAGCTTTTCGACGGCCTCGACATGCCGCCCGGCTCCGTCGTGCCATTGGAC GTCGGCAGAGCGACACAGCTGGACGTCGAGGCGGTCTTCCAGGTGCAGGCGGGCGCGCCGGCTGCCGGGAGCGCGGCGGC GGGGGCGGAAGCGCCGTACAACTGCAGCGCGAGCGCCGGCTCGGCGGGGCGGGGCTTGCTCGGCCCATTCGGTCTGCTCG TGCTGGCCGACGACGGCCTGTCGGAGCAGACCGCCGTCTACTTCTACCTGGTCAGGGGCGCGGACGGGAAGCTCAGCACT CACTTCTGCCAAGATGCCTTCAGGTCATCCAAGGCGAACGATCTCGTTAAGGCCGTTTACGGCAGCTCTGTCCCCGTGCT CGATGGAGAAGACCTGTCAGTGAGAATACTGGTTGATCACTCCATCGTGGAGAGCTTTGCTCAGGGTGGGAGGACATGCA TTACGTCGCGCGTGTACCCTACGAAGGCAATCTACGACTCTGCTAGAGTTTTCCTCTTCAACAACGCTACGAATCTAAAT GTCACCGCAAAATCGATCAAGATCTGGGAGCTGAATTCAGCCTACATCCGTCCATATCCATATTCAGATTGA |
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