
Microexon ID | Hv_2H:463138530-463138538:+ |
Species | Hordeum Vulgare | Coordinates | 2H:463138530..463138538 |
Microexon Cluster ID | MEP22 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | Glyco_hydro_32N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | YSKYAMMGRACYGSYTWYCAYTTYCARCCYSMCAARAAYTGGATGAAYGATCCYAAYGGTCCAATGTWYTACAAGGGATKGTACCAYYTSTTCTAYCARTACAAYCCV |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | ATCCCAACG |
Microexon Amino Acid seq | DPNA |
Microexon-tag DNA Seq | GAGCTGAGCACCGGGTACCACTTCCGGCCCATAAAGAACTGGATCAACGATCCCAACGCGCCCATGTACTACAAGGGGTGGTACCATTTGTTCTACCAGTACAACCCC |
Microexon-tag Amino Acid Seq | ELSTGYHFRPIKNWINDPNAPMYYKGWYHLFYQYNP |
Microexon-tag spanning region | 463138084-463138912 |
Microexon-tag prediction score | 0.959 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | HORVU.MOREX.r3.2HG0166450.1x |
Reference Transcript ID | HORVU.MOREX.r3.2HG0166450.1 |
Gene ID | HORVU.MOREX.r3.2HG0166450 |
Gene Name | NA |
Transcript ID | HORVU.MOREX.r3.2HG0166450.1 |
Protein ID | |
Gene ID | HORVU.MOREX.r3.2HG0166450 |
Gene Name | |
Pfam domain motif | Glyco_hydro_32N |
Motif E-value | 9.10E-103 |
Motif start | 61 |
Motif end | 382 |
Protein seq | >HORVU.MOREX.r3.2HG0166450.1 MVVLGGRVAWACPVLLVVVVLLLQLAGASHVVYETDLLETEAAAATVPPSILDAELSTGYHFRPIKNWINDPNAPMYYKG WYHLFYQYNPKGAVWGNIVWAHSVSRDLINWVALETAIQPSIKSDKYGCWSGSATILRDGTPAIMYTGIDRADINYEVQN IAFPKNKSDPLLREWVKPRGNPIIVPEGGINATQFRDPTTAWYADGHWRLLIGALSGASRGVAYVYRSRDFMRWTRVRKP LHSAPTGMWECPDLYPVTADGRHRHKGLDTSVVSGPRVKHVLKNSLDLRRYDYYTVGTYDRKTERYVPDNPAGDEHHLRY DYGNFYASKTFYDPVKRRRILWGWANESDAAVDDVAKGWAGIQAIPRKVWLDPSGRQLMQWPLEELEALRGKRPVSIKNR VVKRGEHVEVTGLRTSQADVEVSFEVASIDGAEALDPALANDAQKLCSMRGAHVEGGVGPFGLWVLASSKLEEKTAVFFR VFKAARNINSTNNKPVVLMCSDPTMSSLNPNLYKPTFAGFVDTDIAKGKISLRSLIDRSVVESFGAGGRTCILSRVYPTL ALGKNARLHVFNNGKVDIKVSELTAWEMKKPALMNGA* |
CDS seq | >HORVU.MOREX.r3.2HG0166450.1 ATGGTAGTTCTCGGGGGAAGAGTTGCATGGGCATGCCCGGTGCTGCTGGTGGTGGTGGTGCTGCTGCTGCAGCTCGCCGG GGCGTCGCATGTCGTCTACGAGACCGACCTCCTGGAGACGGAGGCGGCGGCGGCCACTGTGCCGCCTTCGATTCTCGACG CCGAGCTGAGCACCGGGTACCACTTCCGGCCCATAAAGAACTGGATCAACGATCCCAACGCGCCCATGTACTACAAGGGG TGGTACCATTTGTTCTACCAGTACAACCCCAAGGGTGCGGTGTGGGGCAACATCGTGTGGGCGCACTCGGTGTCGCGTGA CCTCATCAACTGGGTGGCGCTGGAGACGGCCATCCAGCCGAGCATCAAGTCGGACAAGTACGGGTGCTGGTCGGGGTCGG CGACCATCCTGCGCGACGGCACGCCGGCGATCATGTACACGGGCATCGACCGCGCCGACATCAACTACGAGGTGCAGAAC ATCGCCTTCCCCAAGAACAAGTCGGACCCGCTGCTCCGCGAGTGGGTGAAGCCGCGGGGCAACCCGATCATCGTGCCGGA GGGCGGCATCAACGCCACCCAGTTCCGGGACCCGACGACGGCGTGGTACGCCGACGGGCACTGGCGGCTGCTCATCGGCG CGCTCTCGGGGGCGTCCCGCGGCGTGGCGTACGTGTACCGGAGCCGCGACTTCATGCGGTGGACGCGGGTGAGGAAGCCG CTGCACTCGGCGCCCACGGGGATGTGGGAGTGCCCGGACCTGTACCCGGTCACGGCGGACGGCCGGCACAGGCACAAGGG GCTGGACACGTCGGTGGTGTCCGGCCCCAGGGTGAAGCACGTGCTCAAGAACAGCCTCGACCTGCGCCGCTACGACTACT ACACCGTCGGCACCTACGACCGCAAGACGGAGCGGTACGTGCCGGACAACCCCGCCGGCGACGAGCACCACCTGCGCTAC GACTACGGCAACTTCTACGCCTCCAAGACCTTCTACGACCCGGTCAAGCGCCGCCGCATCCTCTGGGGCTGGGCCAACGA GTCCGACGCCGCCGTCGACGACGTCGCCAAGGGATGGGCCGGAATCCAGGCGATTCCGAGAAAGGTTTGGCTGGACCCGA GTGGGAGGCAGCTGATGCAGTGGCCCCTGGAGGAGCTTGAGGCGCTGAGGGGGAAAAGGCCGGTCAGCATCAAGAACAGG GTGGTCAAGCGGGGAGAGCACGTCGAGGTCACCGGGCTACGGACCTCACAGGCTGACGTGGAGGTGAGCTTTGAGGTGGC GAGCATCGATGGGGCGGAGGCGTTGGACCCGGCGTTAGCCAACGACGCCCAGAAGCTGTGCAGCATGAGGGGTGCCCACG TGGAAGGCGGCGTGGGCCCCTTCGGCCTGTGGGTGCTCGCCTCGTCCAAGCTGGAGGAGAAGACGGCGGTCTTCTTCCGG GTGTTCAAGGCCGCGCGCAACATCAACAGCACCAATAATAAGCCCGTCGTCCTCATGTGCTCCGATCCAACCATGTCATC TCTGAACCCGAACCTATACAAGCCGACCTTCGCAGGCTTTGTTGACACTGACATAGCCAAGGGCAAGATATCTCTGAGAA GCCTGATCGATCGGTCCGTCGTGGAGAGCTTCGGGGCAGGGGGCAGGACCTGCATCCTCTCCCGGGTCTACCCGACGCTC GCGCTGGGCAAGAACGCTCGCCTTCACGTCTTCAACAACGGCAAGGTGGACATCAAGGTGTCGGAGCTCACGGCGTGGGA GATGAAGAAGCCGGCGCTCATGAACGGTGCTTAG |
Hv_2H:463138530-463138538:+ does not have available information here.