
Microexon ID | Ha_8:100502311-100502319:- |
Species | Helianthus annuus | Coordinates | 8:100502311..100502319 |
Microexon Cluster ID | MEP22 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | Glyco_hydro_32N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | YSKYAMMGRACYGSYTWYCAYTTYCARCCYSMCAARAAYTGGATGAAYGATCCYAAYGGTCCAATGTWYTACAAGGGATKGTACCAYYTSTTCTAYCARTACAAYCCV |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | ATCCAACTG |
Microexon Amino Acid seq | DPTG |
Microexon-tag DNA Seq | GTATACAGAACTGGTTATCATCTCCAACCCAAGAAAAACTGGATTAATGATCCAACTGGACCAATGTATTACAAAGGATACTATCATATATTCTATCAATACAACCCT |
Microexon-tag Amino Acid Seq | VYRTGYHLQPKKNWINDPTGPMYYKGYYHIFYQYNP |
Microexon-tag spanning region | 100502182-100504960 |
Microexon-tag prediction score | 0.9307 |
Overlapped with the annotated transcript (%) | 100 |
New Transcript ID | OTG19053x |
Reference Transcript ID | OTG19053 |
Gene ID | HannXRQ_Chr08g0229771 |
Gene Name | NA |
Transcript ID | OTG19053 |
Protein ID | OTG19053 |
Gene ID | HannXRQ_Chr08g0229771 |
Gene Name | NA |
Pfam domain motif | Glyco_hydro_32N |
Motif E-value | 1.7e-100 |
Motif start | 51 |
Motif end | 370 |
Protein seq | >OTG19053 MCGFTKLAWVLVFLICLNICGDGGVMAFHNNYETQTRNHVKVKQVYRTGYHLQPKKNWINDPTGPMYYKGYYHIFYQYNP KGAIWGNIVWAHSVSKDMVNWIHLEPAIVPSKPYDKYGCWSGSATVLPGDKPVIFYTGIVDPKPSPGHQVQVYAIPANYS DPYLREWIKPDDNPFLKPTSENISAFRDPTTAWYNNGHWKMIIGSRHNHRGIAYLYRSRDFVTWVKAKHPFHSKRDTGMW ECPDFYPVASKGTNGLDTSTLGKGVKYVLKNSIEVTRYEYYTIGRYDLIKDIYVPYNTTEDGWGGLRYDYGNFYASKSFY DPSTKRRILWGWANESSTQNEDIEKGWAGIQLIPRKVWLDPSGQMLLQWPISELETLRRKKVELNNVIVKKGNIVEVKGL IAVQADVDVTFTFSSLEKAELYDESWAEFPHHDLGKSICGVRGATVQGGLGPFGLMTLASHNLEEYTPVFFRVFKTINKK HKVLLCSDATPSSLNPKEYKPSFGGFVDVDLSEKKLSLRSLIDHSVVESFAEGGKTVITSRVYPTLAVIRNVHLHVFNNG YEPITIKKLNAWSMKTAKTTSIN* |
CDS seq | >OTG19053 ATGTGTGGGTTTACAAAGCTTGCATGGGTTTTGGTGTTTTTGATATGTCTAAACATTTGTGGCGATGGAGGGGTCATGGC CTTTCACAATAATTACGAAACTCAAACTCGTAATCATGTGAAGGTAAAACAAGTATACAGAACTGGTTATCATCTCCAAC CCAAGAAAAACTGGATTAATGATCCAACTGGACCAATGTATTACAAAGGATACTATCATATATTCTATCAATACAACCCT AAAGGTGCGATATGGGGAAACATTGTGTGGGCTCATTCGGTGTCAAAAGATATGGTTAATTGGATACATCTTGAACCAGC AATTGTGCCATCAAAACCTTATGACAAATATGGGTGTTGGTCTGGATCCGCTACAGTCTTGCCAGGGGATAAACCGGTAA TCTTTTATACAGGGATCGTTGACCCGAAACCTTCACCTGGTCATCAAGTCCAGGTCTACGCTATACCCGCCAATTACTCA GACCCCTACCTAAGAGAATGGATCAAACCTGATGACAACCCTTTCTTAAAGCCCACAAGTGAGAACATTTCGGCTTTTCG TGACCCCACAACTGCATGGTACAACAATGGTCATTGGAAGATGATTATTGGTAGTAGACATAACCATAGAGGAATTGCTT ATTTATACCGAAGTCGAGATTTTGTTACATGGGTCAAGGCAAAACATCCGTTTCATAGTAAACGTGATACGGGTATGTGG GAATGCCCTGACTTTTACCCGGTAGCATCTAAAGGAACAAATGGGTTAGACACATCAACATTGGGTAAGGGTGTTAAATA TGTTCTTAAAAACAGCATTGAAGTGACTAGGTACGAATATTATACCATCGGGAGGTATGACCTCATTAAAGATATATATG TTCCATACAATACAACTGAAGATGGTTGGGGCGGATTAAGATACGACTATGGAAACTTTTATGCCTCAAAGTCATTTTAT GACCCGAGCACGAAAAGGAGGATTCTCTGGGGTTGGGCAAATGAATCAAGCACTCAAAATGAAGATATTGAAAAGGGATG GGCTGGAATTCAGTTGATTCCACGAAAGGTATGGTTGGATCCAAGCGGGCAAATGCTGTTACAATGGCCAATTTCTGAAC TGGAAACACTAAGGCGTAAAAAAGTGGAGCTAAACAACGTGATTGTTAAAAAGGGGAATATCGTTGAAGTGAAAGGACTC ATAGCAGTACAGGCGGACGTTGACGTTACATTTACATTTTCAAGTTTGGAAAAAGCTGAGTTGTATGACGAAAGTTGGGC TGAATTCCCACATCATGATCTTGGTAAAAGTATATGTGGGGTTAGGGGTGCAACGGTTCAAGGTGGGCTCGGGCCATTTG GTCTCATGACCCTCGCTTCACACAACCTTGAAGAGTATACGCCTGTATTTTTTAGAGTTTTTAAAACTATCAACAAGAAA CATAAAGTTCTCTTATGTTCTGATGCCACTCCTTCCTCACTGAACCCAAAGGAATACAAACCATCATTTGGAGGCTTTGT GGATGTTGACTTATCAGAAAAGAAGCTTTCACTTAGGAGTTTGATTGATCATTCAGTTGTAGAAAGCTTTGCAGAAGGAG GAAAGACGGTTATTACATCAAGGGTATATCCAACATTAGCTGTTATTCGTAACGTTCATTTGCATGTATTTAACAATGGA TATGAACCCATCACCATCAAGAAGCTGAATGCATGGTCTATGAAGACAGCAAAGACAACTAGTATCAATTAG |
Ha_8:100502311-100502319:- does not have available information here.