
Microexon ID | Ha_13:114502896-114502904:- |
Species | Helianthus annuus | Coordinates | 13:114502896..114502904 |
Microexon Cluster ID | MEP22 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | Glyco_hydro_32N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | YSKYAMMGRACYGSYTWYCAYTTYCARCCYSMCAARAAYTGGATGAAYGATCCYAAYGGTCCAATGTWYTACAAGGGATKGTACCAYYTSTTCTAYCARTACAAYCCV |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | ACCCTAATG |
Microexon Amino Acid seq | DPNG |
Microexon-tag DNA Seq | CCTTACAGGACAGCATATCACTTCCAGCCTTCCAAAAACTGGATGAATGACCCTAATGGGCCAATGTATTACAAGGGGGTCTACCATTTTTTCTATCAATTCAATCCA |
Microexon-tag Amino Acid Seq | PYRTAYHFQPSKNWMNDPNGPMYYKGVYHFFYQFNP |
Microexon-tag spanning region | 114502225-114503097 |
Microexon-tag prediction score | 0.9525 |
Overlapped with the annotated transcript (%) | 91.67 |
New Transcript ID | OTG01909x |
Reference Transcript ID | OTG01909 |
Gene ID | HannXRQ_Chr13g0407171 |
Gene Name | NA |
Ha_13:114502896-114502904:- does not have available information here.
Microexon DNA seq | ACCCTAATG |
Microexon Amino Acid seq | DPNG |
Microexon-tag DNA Seq | CCTTACAGGACAGCATATCACTTCCAGCCTTCCAAAAACTGGATGAATGACCCTAATGGGCCAATGTATTACAAGGGGGTCTACCATTTTTTCTATCAATTCAATCCA |
Microexon-tag Amino Acid seq | PYRTAYHFQPSKNWMNDPNGPMYYKGVYHFFYQFNP |
Transcript ID | Ha.16357.1 |
Gene ID | Ha.16357 |
Gene Name | NA |
Pfam domain motif | Glyco_hydro_32N |
Motif E-value | 6.2e-97 |
Motif start | 57 |
Motif end | 375 |
Protein seq | >Ha.16357.1 MMLFKTKLSSLNILMKIYGFCVFSLCCFLIFNGVQVEAFKNHTLLLNVSQPYRTAYHFQPSKNWMNDPNGPMYYKGVYHF FYQFNPYGPLWGNISWAHAISHDLINWVHLDIALVPNEPYDINGCFSGSATILPNGEPAILYTGVDGNLHQLQNLAFPKN ISDPLLNEWVKWSLNPILSPPDESNPFLYRDPSTGWMGPDGEWRVVIGTQIDHQGAAILYKSKDFQSWTMSPSPLQLSNI TTFWECPDFYPVICNGKSGLDTSVISVQGKDIKHVLKASFNNQDYYIMGKYDPESDHYDVDADFMKSKGWLRYDYGRFYA SKSFYDGDKKRRILWSWVCEGDTAPDAIEKGWSGLQTIPRSIQLSKNEDQLVQWPVKELEKLRTRKVHFKNKKLRGRSMI EISGITASQADVEITFRLSKHKHAEVLVPEVIDPQLLCTQKNASMGGKFGPFGLLVLASKDLTEHTAVFFRVFRTANSFR VIMCVDPSRSSSKPLIDKPIYGAFLALDPRHAKISLRTLIDHSIVESFGGEGLACITSRIYPVLAVGEQAHLFAFNNGTQ SLSISSLSAWSMKKAQIV* |
CDS seq | >Ha.16357.1 ATGATGCTTTTCAAAACTAAACTTTCATCTCTGAATATTTTGATGAAGATATATGGTTTTTGTGTATTTTCTTTGTGTTG TTTCCTGATTTTTAATGGAGTCCAGGTTGAAGCTTTCAAGAACCATACATTGCTACTGAATGTTTCACAGCCTTACAGGA CAGCATATCACTTCCAGCCTTCCAAAAACTGGATGAATGACCCTAATGGGCCAATGTATTACAAGGGGGTCTACCATTTT TTCTATCAATTCAATCCATATGGTCCACTATGGGGTAACATATCATGGGCTCATGCCATATCGCATGATCTTATCAACTG GGTACATCTTGATATTGCTCTGGTACCAAACGAGCCTTACGATATCAATGGGTGCTTTTCTGGTTCCGCAACGATTCTAC CAAATGGTGAACCGGCGATCCTATACACAGGTGTTGATGGCAATTTACACCAACTACAAAATTTGGCATTTCCGAAAAAC ATATCGGACCCGCTACTAAATGAATGGGTAAAATGGTCACTTAACCCAATATTGAGTCCTCCAGATGAATCTAACCCATT CTTATATAGAGATCCATCAACGGGTTGGATGGGTCCGGATGGCGAATGGAGGGTTGTTATTGGAACTCAGATTGATCATC AAGGAGCAGCTATTCTTTACAAAAGTAAGGATTTTCAAAGTTGGACTATGTCTCCGAGCCCGTTACAGTTATCTAACATA ACAACATTTTGGGAATGTCCTGACTTTTATCCTGTTATTTGTAACGGGAAAAGCGGGCTTGATACATCAGTTATATCTGT TCAAGGGAAGGACATTAAGCATGTTCTTAAAGCTAGTTTTAATAACCAGGATTATTATATAATGGGAAAATATGATCCAG AAAGTGACCACTACGACGTTGATGCTGACTTTATGAAGAGTAAAGGGTGGTTACGGTATGATTATGGGAGGTTTTATGCT TCAAAGTCGTTTTATGATGGTGATAAGAAGAGAAGGATATTATGGTCATGGGTTTGTGAAGGTGATACTGCACCAGATGC TATCGAAAAAGGTTGGTCTGGCCTTCAGACGATTCCTAGGAGCATCCAGCTTAGTAAAAATGAAGACCAGTTGGTGCAGT GGCCTGTCAAGGAACTAGAGAAACTACGAACACGGAAAGTGCATTTCAAGAATAAAAAACTCAGGGGCCGGTCCATGATT GAAATTTCTGGCATCACAGCTTCGCAGGCTGATGTAGAAATCACGTTTCGCTTGTCAAAACACAAACATGCTGAGGTGTT GGTTCCTGAAGTAATTGATCCCCAACTTCTTTGTACACAAAAGAATGCTTCAATGGGGGGAAAATTTGGGCCTTTCGGAT TGCTGGTCTTGGCTTCGAAGGACCTTACTGAACACACTGCGGTCTTCTTTCGTGTCTTTAGAACCGCTAACAGTTTTAGA GTGATCATGTGTGTTGACCCAAGCAGGTCGTCTTCAAAACCACTGATTGACAAGCCCATCTATGGAGCTTTTCTTGCACT TGATCCTCGACACGCAAAGATTTCCTTGAGAACCTTGATAGATCACTCCATTGTAGAAAGTTTTGGTGGAGAAGGATTGG CTTGCATTACATCAAGAATTTATCCAGTATTGGCAGTTGGAGAACAAGCACATCTTTTTGCATTCAACAATGGCACTCAG AGTTTGAGTATTTCAAGTTTAAGTGCTTGGAGTATGAAAAAAGCTCAAATTGTCTAA |