
Microexon ID | Ha_1:67420364-67420372:+ |
Species | Helianthus annuus | Coordinates | 1:67420364..67420372 |
Microexon Cluster ID | MEP22 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | Glyco_hydro_32N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | YSKYAMMGRACYGSYTWYCAYTTYCARCCYSMCAARAAYTGGATGAAYGATCCYAAYGGTCCAATGTWYTACAAGGGATKGTACCAYYTSTTCTAYCARTACAAYCCV |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Ha_1:67420364-67420372:+ does not have available information here.
Transcript ID | OTG36671 |
Protein ID | OTG36671 |
Gene ID | HannXRQ_Chr01g0010141 |
Gene Name | NA |
Pfam domain motif | Glyco_hydro_32N |
Motif E-value | 3.2e-101 |
Motif start | 57 |
Motif end | 374 |
Protein seq | >OTG36671 MDLQIQSKLIRVLLCCIPIIFNTFNGNGVVMASHKVNPNYQSVSAVKVKQVYRTAFHFQPKQHWINDPNAPMYYKGLYHF FCQYNPKGAVWGNIVWAHSVSTDMINWISLKPALVPSKWFDKYGCWSGSATILPGEKPVILYTGVIKEKPEPGYQVQNYA IPANYSDPYLQEWVKPDNNPILKPVQVNISSFRDPSTAWYNNGHWKMLVGSRHYSRGIAYLYRSKDFVRWTRARHPFNEK LGTGMWECPDFYPLSSQGQRNGLDASASGTKYVFKVSLDETRNECYMIGEYDLVQDRFHPDNTSGWTAGLRYDYGNFYAS KTFFDPIKKRRILWGWANESSTKDEDVAKGWAGIQLIPRMVWLDPSGKQLLQWPIRELETLRGKKKNLKNVKLNKGDIME IKGITAAQADVDVTFTFSSFSKVEPYDKKWEKFSPQDLCGINGATVQGGLGPFGILALASKNLEEYTPVFFRIFKTHDKN YKVLMCSDATPSSTNPNEYKPSFGGFVDMDLTNKTLCLRSLIDHSVVESFGEGGKTVITSRVYPELAVYGDAHLHVFNNG SETITVERLNAWSINAPIMN* |
CDS seq | >OTG36671 ATGGATCTTCAAATTCAAAGTAAACTAATTAGGGTTTTGCTATGTTGCATCCCCATAATCTTCAATACTTTCAATGGCAA TGGTGTAGTCATGGCTTCCCACAAGGTTAATCCAAACTACCAGTCTGTAAGTGCTGTCAAAGTCAAGCAGGTTTATAGAA CCGCCTTCCATTTCCAGCCCAAACAACATTGGATCAACGATCCAAACGCACCAATGTATTACAAAGGACTTTACCATTTC TTCTGTCAATACAACCCCAAGGGTGCGGTGTGGGGCAACATTGTGTGGGCGCACTCTGTATCAACGGACATGATTAACTG GATATCGTTAAAACCCGCACTAGTACCATCAAAATGGTTTGATAAGTATGGTTGTTGGTCAGGATCCGCCACAATCCTCC CAGGTGAAAAACCTGTCATTTTATACACTGGGGTAATAAAAGAGAAGCCAGAACCAGGCTACCAAGTTCAAAACTACGCG ATACCTGCCAATTATTCAGATCCATACCTCCAAGAATGGGTCAAACCCGACAACAATCCAATCTTGAAGCCAGTTCAAGT GAACATTTCGTCTTTCCGTGACCCTTCAACGGCTTGGTACAACAATGGTCATTGGAAAATGTTGGTTGGTAGTAGACACT ATAGTCGAGGGATTGCTTACCTGTACCGAAGCAAAGATTTTGTTAGGTGGACCCGTGCTAGGCACCCGTTCAATGAAAAG CTAGGTACGGGTATGTGGGAATGCCCAGACTTTTATCCGTTATCATCTCAGGGTCAAAGAAACGGGTTAGACGCTTCAGC TAGTGGCACTAAATATGTTTTCAAGGTGAGCCTTGATGAGACGAGAAATGAATGCTACATGATTGGAGAATATGATTTGG TGCAAGACCGGTTTCACCCGGATAATACATCCGGATGGACCGCAGGGTTAAGATATGATTATGGAAACTTCTATGCGTCC AAGACATTCTTTGATCCTATCAAGAAGCGGAGAATTTTGTGGGGTTGGGCTAATGAGTCCAGCACAAAAGATGAAGATGT TGCCAAGGGATGGGCAGGAATTCAGTTGATTCCACGTATGGTTTGGCTGGATCCTAGTGGAAAGCAGTTGCTACAATGGC CAATTCGGGAACTAGAAACCCTAAGGGGTAAGAAGAAGAATCTAAAGAATGTAAAACTCAACAAAGGAGATATCATGGAA ATAAAAGGAATTACTGCCGCTCAGGCGGATGTAGATGTTACATTTACATTTTCAAGTTTTAGTAAAGTTGAGCCATATGA TAAAAAGTGGGAAAAATTTTCACCACAAGATCTATGTGGGATCAATGGTGCAACCGTACAAGGGGGACTTGGACCATTCG GAATTCTAGCATTGGCCTCCAAGAATCTTGAAGAATACACTCCAGTTTTCTTTCGGATTTTCAAGACTCATGACAAGAAT TATAAAGTTCTCATGTGCTCTGATGCTACTCCTTCCTCAACTAATCCGAATGAATACAAGCCATCATTTGGAGGGTTTGT CGATATGGATTTAACTAATAAGACACTTTGCCTTAGGAGTTTAATTGATCATTCAGTTGTGGAAAGCTTTGGAGAGGGAG GGAAAACAGTCATCACATCTAGGGTTTATCCAGAACTCGCAGTGTATGGTGATGCACATTTGCATGTATTTAACAATGGT AGCGAGACCATAACTGTTGAGAGACTTAATGCTTGGTCCATCAATGCACCTATTATGAACTAA |
Microexon DNA seq | ATCCAAACG |
Microexon Amino Acid seq | DPNA |
Microexon-tag DNA Seq | GTTTATAGAACCGCCTTCCATTTCCAGCCCAAACAACATTGGATCAACGATCCAAACGCACCAATGTATTACAAAGGACTTTACCATTTCTTCTGTCAATACAACCCC |
Microexon-tag Amino Acid seq | VYRTAFHFQPKQHWINDPNAPMYYKGLYHFFCQYNP |
Transcript ID | OTG36671 |
Gene ID | Ha.1083 |
Gene Name | NA |
Pfam domain motif | Glyco_hydro_32N |
Motif E-value | 3.2e-101 |
Motif start | 57 |
Motif end | 374 |
Protein seq | >OTG36671 MDLQIQSKLIRVLLCCIPIIFNTFNGNGVVMASHKVNPNYQSVSAVKVKQVYRTAFHFQPKQHWINDPNAPMYYKGLYHF FCQYNPKGAVWGNIVWAHSVSTDMINWISLKPALVPSKWFDKYGCWSGSATILPGEKPVILYTGVIKEKPEPGYQVQNYA IPANYSDPYLQEWVKPDNNPILKPVQVNISSFRDPSTAWYNNGHWKMLVGSRHYSRGIAYLYRSKDFVRWTRARHPFNEK LGTGMWECPDFYPLSSQGQRNGLDASASGTKYVFKVSLDETRNECYMIGEYDLVQDRFHPDNTSGWTAGLRYDYGNFYAS KTFFDPIKKRRILWGWANESSTKDEDVAKGWAGIQLIPRMVWLDPSGKQLLQWPIRELETLRGKKKNLKNVKLNKGDIME IKGITAAQADVDVTFTFSSFSKVEPYDKKWEKFSPQDLCGINGATVQGGLGPFGILALASKNLEEYTPVFFRIFKTHDKN YKVLMCSDATPSSTNPNEYKPSFGGFVDMDLTNKTLCLRSLIDHSVVESFGEGGKTVITSRVYPELAVYGDAHLHVFNNG SETITVERLNAWSINAPIMN* |
CDS seq | >OTG36671 ATGGATCTTCAAATTCAAAGTAAACTAATTAGGGTTTTGCTATGTTGCATCCCCATAATCTTCAATACTTTCAATGGCAA TGGTGTAGTCATGGCTTCCCACAAGGTTAATCCAAACTACCAGTCTGTAAGTGCTGTCAAAGTCAAGCAGGTTTATAGAA CCGCCTTCCATTTCCAGCCCAAACAACATTGGATCAACGATCCAAACGCACCAATGTATTACAAAGGACTTTACCATTTC TTCTGTCAATACAACCCCAAGGGTGCGGTGTGGGGCAACATTGTGTGGGCGCACTCTGTATCAACGGACATGATTAACTG GATATCGTTAAAACCCGCACTAGTACCATCAAAATGGTTTGATAAGTATGGTTGTTGGTCAGGATCCGCCACAATCCTCC CAGGTGAAAAACCTGTCATTTTATACACTGGGGTAATAAAAGAGAAGCCAGAACCAGGCTACCAAGTTCAAAACTACGCG ATACCTGCCAATTATTCAGATCCATACCTCCAAGAATGGGTCAAACCCGACAACAATCCAATCTTGAAGCCAGTTCAAGT GAACATTTCGTCTTTCCGTGACCCTTCAACGGCTTGGTACAACAATGGTCATTGGAAAATGTTGGTTGGTAGTAGACACT ATAGTCGAGGGATTGCTTACCTGTACCGAAGCAAAGATTTTGTTAGGTGGACCCGTGCTAGGCACCCGTTCAATGAAAAG CTAGGTACGGGTATGTGGGAATGCCCAGACTTTTATCCGTTATCATCTCAGGGTCAAAGAAACGGGTTAGACGCTTCAGC TAGTGGCACTAAATATGTTTTCAAGGTGAGCCTTGATGAGACGAGAAATGAATGCTACATGATTGGAGAATATGATTTGG TGCAAGACCGGTTTCACCCGGATAATACATCCGGATGGACCGCAGGGTTAAGATATGATTATGGAAACTTCTATGCGTCC AAGACATTCTTTGATCCTATCAAGAAGCGGAGAATTTTGTGGGGTTGGGCTAATGAGTCCAGCACAAAAGATGAAGATGT TGCCAAGGGATGGGCAGGAATTCAGTTGATTCCACGTATGGTTTGGCTGGATCCTAGTGGAAAGCAGTTGCTACAATGGC CAATTCGGGAACTAGAAACCCTAAGGGGTAAGAAGAAGAATCTAAAGAATGTAAAACTCAACAAAGGAGATATCATGGAA ATAAAAGGAATTACTGCCGCTCAGGCGGATGTAGATGTTACATTTACATTTTCAAGTTTTAGTAAAGTTGAGCCATATGA TAAAAAGTGGGAAAAATTTTCACCACAAGATCTATGTGGGATCAATGGTGCAACCGTACAAGGGGGACTTGGACCATTCG GAATTCTAGCATTGGCCTCCAAGAATCTTGAAGAATACACTCCAGTTTTCTTTCGGATTTTCAAGACTCATGACAAGAAT TATAAAGTTCTCATGTGCTCTGATGCTACTCCTTCCTCAACTAATCCGAATGAATACAAGCCATCATTTGGAGGGTTTGT CGATATGGATTTAACTAATAAGACACTTTGCCTTAGGAGTTTAATTGATCATTCAGTTGTGGAAAGCTTTGGAGAGGGAG GGAAAACAGTCATCACATCTAGGGTTTATCCAGAACTCGCAGTGTATGGTGATGCACATTTGCATGTATTTAACAATGGT AGCGAGACCATAACTGTTGAGAGACTTAATGCTTGGTCCATCAATGCACCTATTATGAACTAA |