
Microexon ID | Gm_19:45265080-45265088:+ |
Species | Glycine max | Coordinates | 19:45265080..45265088 |
Microexon Cluster ID | MEP22 |
Size | 9 |
Phase | 1 |
Pfam Domain Motif | Glyco_hydro_32N |
Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
Microexon location in the Microexon-tag | 2 |
Microexon-tag DNA Seq | YSKYAMMGRACYGSYTWYCAYTTYCARCCYSMCAARAAYTGGATGAAYGATCCYAAYGGTCCAATGTWYTACAAGGGATKGTACCAYYTSTTCTAYCARTACAAYCCV |
Logo of Microexon-tag DNA Seq | ![]() |
Alignment of exons | ![]() |
Microexon DNA seq | ATCCAAATG |
Microexon Amino Acid seq | DPNG |
Microexon-tag DNA Seq | CAACACAGAACTGCATACCATTTCCAACCTCCTAAGAACTGGATCAACGATCCAAATGGACCCATGTACTACAATGGAATCTATCATTTATTCTACCAATACAACCCC |
Microexon-tag Amino Acid Seq | QHRTAYHFQPPKNWINDPNGPMYYNGIYHLFYQYNP |
Microexon-tag spanning region | 45263076-45265234 |
Microexon-tag prediction score | 0.96 |
Overlapped with the annotated transcript (%) | 45.37 |
New Transcript ID | KRG96203x |
Reference Transcript ID | KRG96203 |
Gene ID | GLYMA_19G195400 |
Gene Name | NA |
Gm_19:45265080-45265088:+ does not have available information here.
Microexon DNA seq | ATCCAAATG |
Microexon Amino Acid seq | DPNG |
Microexon-tag DNA Seq | CAACACAGAACTGCATACCATTTCCAACCTCCTAAGAACTGGATCAACGATCCAAATGGACCCATGTACTACAATGGAATCTATCATTTATTCTACCAATACAACCCC |
Microexon-tag Amino Acid seq | QHRTAYHFQPPKNWINDPNGPMYYNGIYHLFYQYNP |
Transcript ID | Gm.28679.1 |
Gene ID | Gm.28679 |
Gene Name | NA |
Pfam domain motif | Glyco_hydro_32N |
Motif E-value | 5.6e-105 |
Motif start | 52 |
Motif end | 371 |
Protein seq | >Gm.28679.1 MVLPKCRYITVVFFAFVVLLINNGVEAFHKVYPHLQSVSTISVSRQHRTAYHFQPPKNWINDPNGPMYYNGIYHLFYQYN PKGSVWGNIVWAHSISKDLINWRTLEPALYPSKPFDKFGCWSGSATIVPGKGPVILYTGVVDDKQTQVQCYAVPEDLNDP LLRKWVKPDKFNPILVANKGVNGSAFRDPTTAWWSKDGHWKILVGSRRKRRGIAYLYRSKDFMTWVQAKHPIHSKGETGM WECPDFYPVLVNGNQGLETSEGGNHVKHVFKNSLDMTRFDYYTVGTYFEDKDRYVPDNTSVDGWGGLRYDYGNFYASKSF FDPSKNRRILWGWANESDTKEDDVRKGWAGIQAIPRTVWLDSTGRQLVQWPVEELNNLRGKEVNMNSQKLQKGDYVEVKG ITAAQADVEVTFSFASLDKAETYDPKWVNAQDLCAQKGSKLQGGVGPFGLLTLASQNLEEFTPVFFRIFKGPVKHVVLLC SDATSSSLKSNMYKPSFAGFVDVDLATNKKLSLRSLIDHSVVESFGEGGKTNILSRVYPQLAVANQGHLFVFNNGTEPIS VENLKAWSMKPADIK* |
CDS seq | >Gm.28679.1 ATGGTTCTTCCAAAGTGTCGCTATATCACTGTAGTGTTTTTTGCCTTTGTTGTGTTACTGATCAACAATGGCGTTGAAGC TTTTCATAAAGTATATCCTCATCTTCAATCTGTTTCAACGATTTCCGTGAGCAGACAACACAGAACTGCATACCATTTCC AACCTCCTAAGAACTGGATCAACGATCCAAATGGACCCATGTACTACAATGGAATCTATCATTTATTCTACCAATACAAC CCCAAAGGCTCAGTGTGGGGTAACATTGTGTGGGCCCACTCAATATCAAAGGATCTCATCAATTGGAGGACCCTTGAACC TGCCCTATATCCATCCAAACCATTTGACAAGTTTGGTTGTTGGTCTGGGTCAGCCACCATAGTCCCAGGTAAAGGACCTG TGATCCTCTACACCGGAGTTGTTGACGACAAACAAACTCAGGTTCAATGCTACGCCGTACCCGAAGACCTAAATGACCCA CTCCTCCGAAAATGGGTTAAACCTGACAAATTCAACCCGATCTTGGTTGCTAACAAAGGTGTTAATGGTAGTGCCTTTCG CGACCCAACCACGGCATGGTGGAGCAAGGATGGACACTGGAAGATATTGGTGGGTAGTAGAAGGAAGCGTAGAGGTATAG CTTATTTGTACAGAAGCAAGGACTTTATGACTTGGGTTCAAGCCAAACATCCGATCCATTCCAAGGGTGAGACAGGTATG TGGGAGTGTCCTGATTTTTATCCAGTTTTGGTTAATGGCAATCAAGGATTGGAGACGTCCGAGGGAGGGAATCATGTGAA GCACGTGTTTAAGAATAGTCTTGACATGACTAGGTTCGACTACTACACCGTAGGAACATATTTTGAAGATAAGGATAGAT ATGTCCCAGATAACACTTCAGTGGATGGTTGGGGTGGACTTAGGTATGACTATGGTAATTTCTATGCTTCAAAATCGTTT TTTGACCCCAGTAAGAACAGAAGGATCTTGTGGGGTTGGGCAAACGAGTCTGATACCAAGGAAGATGATGTTCGCAAAGG ATGGGCAGGAATTCAGGCAATTCCGCGAACTGTGTGGCTCGATTCTACTGGGAGACAATTGGTGCAATGGCCTGTTGAAG AATTAAATAATCTCAGAGGGAAAGAAGTTAATATGAACAGTCAAAAGCTTCAAAAGGGAGATTACGTTGAAGTAAAAGGA ATCACCGCTGCCCAGGCAGATGTGGAAGTTACATTCTCATTTGCAAGCTTGGACAAGGCAGAGACATATGATCCTAAGTG GGTAAATGCACAGGACCTCTGTGCCCAAAAGGGTTCAAAACTTCAAGGTGGGGTTGGACCATTTGGGCTTCTCACATTAG CTTCTCAAAATTTGGAGGAGTTCACTCCTGTGTTTTTTAGAATTTTCAAAGGTCCAGTTAAGCATGTGGTTCTCTTATGC TCCGATGCAACAAGTTCCTCTTTGAAGAGTAATATGTACAAGCCATCATTTGCTGGCTTTGTAGATGTGGATTTGGCCAC TAATAAAAAACTCTCTCTTAGGAGTTTGATTGATCACTCAGTAGTGGAGAGTTTTGGTGAAGGAGGGAAGACAAACATTT TGTCTCGGGTTTATCCACAGTTAGCAGTGGCTAATCAAGGTCACTTGTTTGTGTTCAACAACGGAACTGAACCCATCTCG GTGGAAAACCTCAAAGCATGGAGCATGAAGCCGGCTGATATAAAATAA |