| Microexon ID | Bn_scaffoldC08:52026079-52026087:- |
| Species | Brassica Napus | Coordinates | scaffoldC08:52026079..52026087 |
| Microexon Cluster ID | MEP22 |
| Size | 9 |
| Phase | 1 |
| Pfam Domain Motif | Glyco_hydro_32N |
| Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
| Microexon location in the Microexon-tag | 2 |
| Microexon-tag DNA Seq | YSKYAMMGRACYGSYTWYCAYTTYCARCCYSMCAARAAYTGGATGAAYGATCCYAAYGGTCCAATGTWYTACAAGGGATKGTACCAYYTSTTCTAYCARTACAAYCCV |
| Logo of Microexon-tag DNA Seq |  |
| Alignment of exons |  |
| Microexon DNA seq | ATCCTAATG |
| Microexon Amino Acid seq | DPNG |
| Microexon-tag DNA Seq | TGGCAACGAACGGCCTTTCATTTTCAGCCTGAACAGAATTGGATGAACGATCCTAATGGTCCATTGTTCTACAAAGGATGGTACCATTTCTTCTACCAGTATAATCCA |
| Microexon-tag Amino Acid Seq | WQRTAFHFQPEQNWMNDPNGPLFYKGWYHFFYQYNP |
| Microexon-tag spanning region | 52025513-52026550 |
| Microexon-tag prediction score | 0.9707 |
| Overlapped with the annotated transcript (%) | 100 |
| New Transcript ID | BnaC08T0507100ZSx |
| Reference Transcript ID | BnaC08T0507100ZS |
| Gene ID | BnaC08G0507100ZS |
| Gene Name | NA |
| Transcript ID | BnaC08T0507100ZS |
| Protein ID | |
| Gene ID | BnaC08G0507100ZS |
| Gene Name | |
| Pfam domain motif | Glyco_hydro_32N |
| Motif E-value | 1.40E-102 |
| Motif start | 124 |
| Motif end | 444 |
| Protein seq | >BnaC08T0507100ZS MASSDALLPISAREEDPLLSDGSRSDPNAETHRRRRPVKGLLAVSFGLLFIAFYVVLIPTHDGSSRSNDVKIENDETATT TSRARLAGVSEKSNGQLWKLSGERNTVSFAWNNSVLSWQRTAFHFQPEQNWMNDPNGPLFYKGWYHFFYQYNPNAAVWGD IVWGHAVSKDLIHWVHLPIAMVADQWYDANGVWTGSATFLDDGSLAMLYTGSTDKSVQVQNLAYPEDLNDPLLLKWVKYS GNPVLVPPPGILPKDFRDPTTAWKTSDGKWRITIGSKINKTGISLVYDTIDFKTYEKQDALLHKVPNTGMWECVDFYPVS KTAVNGLDTSVNGPNVKHIVKASMDDTRFDHYAVGTYFDSNGTWIPDDPTIDVGMSASLRYDYGKFYASKTFYDQNKGRR ILWSWIGESDSEAADVQKGWSSLQGIPRTVVLDTKTGKNLVQWPVEEIKSLRLSSKQFDMEVGPGSVVPVDVDSAAQLDI EAEFEINKESLDKILGDASVVAEEFSCQKSGGASVRGALGPFGFSVLADKSLSEQTPVYFYVAKGKDSKLKTFFCIDTSR STFANDVVKPIYGSSVPVLKGEKLTMRILVDHSIVEGFAQAGRTCITSRVYPTKAIYGAAKLFVFNNAIDATITASFKVW QMNSAFIHPYSEEAVRALSST* |
| CDS seq | >BnaC08T0507100ZS ATGGCGAGCTCCGATGCTCTCTTGCCAATCTCCGCCAGAGAAGAAGACCCATTATTATCCGACGGGTCAAGATCCGACCC TAACGCGGAAACCCATCGCCGTAGAAGGCCCGTTAAAGGTCTCCTCGCCGTCTCATTTGGGCTTTTGTTTATCGCCTTTT ACGTCGTTCTCATCCCCACACACGACGGATCTAGTAGATCCAACGACGTTAAAATCGAAAACGATGAAACAGCGACGACA ACGTCACGTGCACGTCTCGCCGGGGTGTCGGAGAAAAGCAATGGTCAGTTGTGGAAGCTTTCCGGTGAGCGAAATACGGT GTCGTTCGCTTGGAACAACAGTGTGTTGTCATGGCAACGAACGGCCTTTCATTTTCAGCCTGAACAGAATTGGATGAACG ATCCTAATGGTCCATTGTTCTACAAAGGATGGTACCATTTCTTCTACCAGTATAATCCAAACGCAGCCGTATGGGGTGAT ATTGTCTGGGGTCATGCCGTGTCTAAGGACCTAATCCATTGGGTCCATTTGCCCATAGCCATGGTAGCTGACCAATGGTA TGATGCCAATGGTGTCTGGACAGGCTCAGCCACATTCCTCGATGATGGCTCTCTCGCCATGTTGTACACTGGTTCCACCG ATAAATCCGTTCAGGTCCAAAATCTTGCATACCCTGAGGACCTCAACGACCCACTCCTATTGAAATGGGTCAAGTACTCA GGCAATCCGGTTCTAGTACCTCCTCCTGGCATTCTCCCCAAGGACTTCCGTGACCCAACGACTGCATGGAAGACATCAGA TGGAAAATGGCGGATCACAATCGGTTCCAAGATCAACAAAACCGGAATCTCACTAGTGTACGACACAATCGACTTCAAGA CTTACGAGAAACAGGACGCATTGTTGCACAAGGTTCCAAACACCGGGATGTGGGAGTGTGTTGACTTTTATCCAGTGTCT AAGACCGCGGTCAATGGGCTCGACACATCGGTCAACGGACCAAATGTGAAGCATATCGTGAAGGCTAGCATGGACGACAC CAGGTTTGATCATTATGCCGTGGGGACGTACTTTGATTCGAACGGAACATGGATCCCGGATGATCCTACTATCGATGTTG GGATGAGTGCTAGTTTGAGATATGATTACGGAAAGTTCTATGCTTCAAAGACGTTTTATGACCAGAACAAGGGTCGGAGA ATCTTGTGGAGTTGGATTGGTGAATCTGATAGTGAAGCTGCTGATGTACAAAAGGGCTGGTCTTCTCTTCAGGGTATCCC AAGAACCGTTGTTCTCGACACAAAGACAGGAAAGAACCTGGTCCAATGGCCAGTTGAAGAAATAAAATCTCTTAGATTAA GCAGCAAGCAATTTGATATGGAAGTCGGTCCCGGTTCAGTGGTACCGGTCGATGTGGATTCCGCAGCTCAGCTAGACATA GAAGCGGAGTTCGAGATCAATAAAGAGTCTCTTGACAAAATCCTTGGAGATGCTTCAGTGGTGGCTGAGGAGTTTAGCTG CCAGAAGAGCGGAGGCGCCAGTGTCCGTGGTGCTTTAGGACCGTTCGGATTCTCGGTTCTTGCCGACAAGAGCTTGTCGG AACAAACTCCGGTTTACTTCTATGTGGCTAAGGGAAAAGATTCTAAGCTCAAAACTTTCTTCTGCATAGACACTTCAAGG TCAACTTTTGCCAACGATGTCGTTAAACCGATTTATGGTAGTTCTGTACCGGTTCTTAAAGGGGAGAAATTGACCATGAG AATATTGGTTGATCATTCGATAGTAGAGGGATTCGCACAAGCTGGAAGAACATGTATAACGTCAAGGGTATATCCAACAA AAGCCATCTATGGAGCAGCTAAGCTTTTTGTATTCAACAATGCCATTGATGCGACTATTACGGCGTCGTTCAAAGTCTGG CAAATGAACAGTGCTTTTATTCACCCTTACTCTGAGGAAGCTGTCCGTGCTCTCTCCAGCACCTGA |
Bn_scaffoldC08:52026079-52026087:- does not have available information here.