| Microexon ID | Bn_scaffoldC06:15622447-15622455:+ |
| Species | Brassica Napus | Coordinates | scaffoldC06:15622447..15622455 |
| Microexon Cluster ID | MEP22 |
| Size | 9 |
| Phase | 1 |
| Pfam Domain Motif | Glyco_hydro_32N |
| Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
| Microexon location in the Microexon-tag | 2 |
| Microexon-tag DNA Seq | YSKYAMMGRACYGSYTWYCAYTTYCARCCYSMCAARAAYTGGATGAAYGATCCYAAYGGTCCAATGTWYTACAAGGGATKGTACCAYYTSTTCTAYCARTACAAYCCV |
| Logo of Microexon-tag DNA Seq |  |
| Alignment of exons |  |
| Microexon DNA seq | ATCCTAATG |
| Microexon Amino Acid seq | DPNG |
| Microexon-tag DNA Seq | CCGTACCGGACCGGTTATCACTTTCAACCTCCCAGTAATTGGATGAACGATCCTAATGGACCAATGGTATACAAGGGAATATACCATCTTTTCTACCAGTATAACCCA |
| Microexon-tag Amino Acid Seq | PYRTGYHFQPPSNWMNDPNGPMVYKGIYHLFYQYNP |
| Microexon-tag spanning region | 15622265-15622589 |
| Microexon-tag prediction score | 0.9547 |
| Overlapped with the annotated transcript (%) | 100 |
| New Transcript ID | BnaC06T0085900ZSx |
| Reference Transcript ID | BnaC06T0085900ZS |
| Gene ID | BnaC06G0085900ZS |
| Gene Name | NA |
| Transcript ID | BnaC06T0085900ZS |
| Protein ID | |
| Gene ID | BnaC06G0085900ZS |
| Gene Name | |
| Pfam domain motif | Glyco_hydro_32N |
| Motif E-value | 6.80E-104 |
| Motif start | 35 |
| Motif end | 355 |
| Protein seq | >BnaC06T0085900ZS MGKTLLLLSLLLCSFIIDLEASRQDLNQPYRTGYHFQPPSNWMNDPNGPMVYKGIYHLFYQYNPYGAVWDVRIVWGHSTS LDLVNWTPQPPAFSPSQPSDINGCWSGSVTILPNGTPVILYTGIDQNKSQVQNVAVPVNISDPYLREWSKSPANPLMAPN AVNGINPDRFRDPTTAWIGHDGEWRVIVGSSTDDRRGLAVLYKSRDFFNWTQATKPLHHEELTGMWECPDFFPVSITGTE GLETSSSGEVKHVLKMSLIETLHDYYTIGCYDREKDVYVPDHGFVQDGSAPRLDYGKFYASKAFYDDVKKRRILWGWVNE SSPAKDDIEKGWSGLQSFPRKIWLGESGNELLQWPIEEIETLRETQVNWYNKVLKAGSTIQVHGVTAAQADVDVSFKVKD LEKADVIEPSWTDPQKICSEEDLSVKSGLGPFGLMVLASNDMEEYTSVYFRIFKSNDTKYVVLMCSDQSRSSLNEENDKA TFGAFVAIDPSHETLSLRTLIDHSIVESYGGGGKVCVTSRVYPKLAIGEKANLFVFNKGTQSVDVLSLSAWSLKSAQING ETVSPFSECEDSHSLNQY* |
| CDS seq | >BnaC06T0085900ZS ATGGGGAAAACGCTGTTACTGCTGTCTTTGTTGCTCTGCAGCTTTATCATCGATCTTGAAGCTTCACGCCAAGATCTCAA CCAACCGTACCGGACCGGTTATCACTTTCAACCTCCCAGTAATTGGATGAACGATCCTAATGGACCAATGGTATACAAGG GAATATACCATCTTTTCTACCAGTATAACCCATACGGCGCCGTTTGGGATGTAAGAATCGTGTGGGGTCACTCCACGTCA CTTGATCTAGTTAACTGGACCCCACAGCCTCCAGCATTCAGTCCATCTCAGCCGTCAGACATCAACGGTTGTTGGTCAGG CTCCGTCACGATTCTACCAAACGGCACACCAGTGATCCTCTACACCGGCATTGACCAAAACAAAAGCCAAGTCCAAAACG TCGCCGTTCCGGTTAACATCTCCGATCCATATCTCCGAGAATGGTCAAAGTCGCCGGCCAATCCTCTGATGGCTCCTAAC GCCGTCAACGGAATCAACCCCGACCGGTTCCGAGATCCGACCACCGCGTGGATAGGACACGACGGAGAATGGAGAGTCAT CGTCGGAAGCTCGACGGACGATCGTCGAGGATTAGCGGTTCTGTACAAGAGCAGAGATTTCTTCAACTGGACGCAAGCGA CGAAGCCTCTTCACCACGAGGAGTTAACCGGAATGTGGGAGTGTCCTGATTTTTTCCCGGTTTCGATAACCGGAACGGAA GGTCTCGAAACGTCGTCGTCTGGTGAGGTGAAACACGTGCTGAAAATGAGTTTGATCGAGACGTTGCATGATTATTACAC GATTGGGTGTTACGACCGTGAGAAGGATGTTTACGTACCGGATCATGGGTTTGTGCAAGATGGTTCGGCTCCGAGGTTGG ACTACGGGAAGTTTTACGCGTCGAAAGCGTTTTACGATGATGTTAAGAAACGAAGGATCTTGTGGGGTTGGGTTAACGAG TCTTCACCTGCTAAGGATGATATTGAGAAGGGTTGGTCTGGTCTACAGTCATTTCCAAGAAAAATATGGCTTGGTGAATC GGGAAATGAGCTGCTACAATGGCCGATTGAAGAGATTGAGACCTTGCGTGAGACACAAGTCAACTGGTACAACAAGGTTC TTAAGGCAGGATCTACTATCCAAGTTCATGGTGTTACTGCTGCACAGGCTGATGTTGATGTATCATTCAAAGTGAAAGAT TTGGAAAAAGCGGATGTGATTGAACCAAGTTGGACCGACCCTCAAAAGATATGTAGTGAGGAAGATTTATCGGTTAAGTC CGGTTTAGGGCCATTTGGTTTGATGGTGTTGGCATCAAATGACATGGAGGAATACACATCAGTTTACTTCAGAATCTTCA AGTCAAATGATACTAAGTACGTAGTGTTGATGTGCAGTGACCAAAGCAGATCTTCGTTGAATGAAGAAAATGATAAAGCA ACGTTTGGTGCTTTTGTAGCAATAGACCCTTCACACGAAACACTTTCTCTTAGGACTTTGATTGACCACTCTATAGTGGA GAGTTATGGTGGAGGAGGCAAAGTATGTGTAACTTCGAGAGTGTATCCAAAATTGGCAATAGGAGAAAAAGCAAATCTCT TTGTCTTCAACAAGGGAACTCAAAGTGTTGATGTCTTGAGCCTAAGTGCTTGGAGCTTGAAGTCTGCCCAAATCAATGGC GAGACAGTGTCACCATTCAGCGAGTGTGAAGATTCACACTCACTTAATCAGTATTGA |
Bn_scaffoldC06:15622447-15622455:+ does not have available information here.