| Microexon ID | Bn_scaffoldC04:66576183-66576191:- |
| Species | Brassica Napus | Coordinates | scaffoldC04:66576183..66576191 |
| Microexon Cluster ID | MEP22 |
| Size | 9 |
| Phase | 1 |
| Pfam Domain Motif | Glyco_hydro_32N |
| Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
| Microexon location in the Microexon-tag | 2 |
| Microexon-tag DNA Seq | YSKYAMMGRACYGSYTWYCAYTTYCARCCYSMCAARAAYTGGATGAAYGATCCYAAYGGTCCAATGTWYTACAAGGGATKGTACCAYYTSTTCTAYCARTACAAYCCV |
| Logo of Microexon-tag DNA Seq |  |
| Alignment of exons |  |
| Microexon DNA seq | ATCCAAATG |
| Microexon Amino Acid seq | DPNG |
| Microexon-tag DNA Seq | CTTCACAGAACCGCTTTTCACTTTCAACCTCCAAAGCATTGGATTAACGATCCAAATGGTCCAGTATACTACAAAGGTTTCTACCATCTCTTCTACCAGTATAACACC |
| Microexon-tag Amino Acid Seq | LHRTAFHFQPPKHWINDPNGPVYYKGFYHLFYQYNT |
| Microexon-tag spanning region | 66576055-66577326 |
| Microexon-tag prediction score | 0.9512 |
| Overlapped with the annotated transcript (%) | 100 |
| New Transcript ID | BnaC04T0548100ZSx |
| Reference Transcript ID | BnaC04T0548100ZS |
| Gene ID | BnaC04G0548100ZS |
| Gene Name | NA |
| Transcript ID | BnaC04T0548100ZS |
| Protein ID | |
| Gene ID | BnaC04G0548100ZS |
| Gene Name | |
| Pfam domain motif | Glyco_hydro_32N |
| Motif E-value | 2.20E-103 |
| Motif start | 53 |
| Motif end | 371 |
| Protein seq | >BnaC04T0548100ZS MGISNIVSVLLLLVLLSLSSNNIKGVKAFHHVYENLQSQSVESVDHLHRTAFHFQPPKHWINDPNGPVYYKGFYHLFYQY NTKGAVWGNIVWAHSVSKDLVNWEALEHALYPSKWFDIKGTWSGSITIVPGKGPVILYTGVNQNETQIQNYAIPKDPSDP YLRKWIKPDDNPLVMPDYTMNGSAFRDPTTAWFSKDGHWRTVVGSKRKHRGIAYIYRSRDFKHWVKAKHPVHSKESTGMW ECPDFFPVSTTDFQNGLDLDYTGSNTKHVLKVSLDITRFEYYTVGKYDPKKEKYVPNGDTPDGWDGLRFDYGNFYASKTF FDYKKNRRILWGWANESDTVEDDISKGWAGLQVIPRTVLLDANKKQLVFWPIEEIESLRSNYVRMNNKNIKMGQRLEVKG ITPAQADVEVTFNVGQCLEKAEEFDQSYTFKPLDLCKIKGSNVTGGVGPFGLITLATPDLEEYTPVFFRVFKDTSTDKPK VLMCSDARPSSLKQDRGPLKQDRMYKPSFAGFVDVDLSDGRISLRSLIDHSVVESFGALGKTVITSRVYPLKAVKGNAHL YVFNNGTQTVNIESLDAWSMEKPLQMMNNGAL* |
| CDS seq | >BnaC04T0548100ZS ATGGGTATCTCAAATATTGTTTCTGTGTTATTATTGCTTGTACTACTCAGTTTAAGCAGTAATAACATCAAAGGGGTTAA AGCTTTTCATCATGTTTACGAAAATTTGCAATCTCAATCAGTCGAGTCAGTGGATCATCTTCACAGAACCGCTTTTCACT TTCAACCTCCAAAGCATTGGATTAACGATCCAAATGGTCCAGTATACTACAAAGGTTTCTACCATCTCTTCTACCAGTAT AACACCAAGGGTGCGGTTTGGGGCAACATTGTGTGGGCACATTCGGTCTCCAAAGACTTAGTAAATTGGGAGGCTCTTGA ACATGCCCTCTATCCCTCCAAATGGTTTGACATTAAAGGTACATGGTCCGGTTCAATAACAATCGTACCGGGAAAAGGAC CGGTTATCCTATATACCGGTGTTAACCAAAACGAAACTCAAATCCAAAACTACGCAATCCCAAAGGACCCCTCAGACCCA TACCTAAGAAAATGGATTAAACCAGATGATAACCCGCTCGTAATGCCAGACTACACCATGAACGGTTCAGCTTTCCGTGA CCCGACCACGGCATGGTTCTCCAAAGACGGGCATTGGAGAACCGTGGTTGGGTCAAAAAGAAAGCATAGAGGGATTGCGT ATATCTACAGAAGCCGTGATTTCAAGCATTGGGTCAAAGCTAAGCACCCGGTTCACTCTAAAGAATCAACCGGTATGTGG GAGTGTCCTGATTTCTTCCCGGTTTCCACAACTGATTTCCAAAACGGTTTGGACTTGGATTACACCGGTTCGAACACAAA ACACGTGTTGAAAGTTAGCTTGGACATAACCCGTTTTGAGTATTACACGGTGGGGAAGTACGATCCTAAGAAGGAGAAGT ACGTACCAAACGGTGATACACCCGATGGTTGGGACGGTTTGAGATTCGATTATGGTAACTTCTATGCTTCCAAGACATTC TTTGACTACAAAAAGAATAGAAGAATCTTGTGGGGTTGGGCCAATGAATCCGACACCGTTGAAGATGATATCTCCAAGGG TTGGGCTGGTCTTCAGGTGATTCCGAGAACGGTGCTTCTTGATGCAAACAAGAAGCAACTAGTGTTTTGGCCTATTGAAG AAATAGAGTCATTAAGAAGTAACTACGTACGAATGAACAACAAAAACATCAAGATGGGTCAACGCTTAGAAGTCAAAGGA ATCACTCCTGCTCAGGCCGATGTGGAAGTGACATTCAACGTGGGACAATGTCTAGAGAAAGCTGAGGAATTCGACCAGAG CTACACATTCAAACCGTTAGATTTGTGTAAAATAAAAGGCTCGAATGTGACAGGTGGTGTTGGACCTTTCGGTTTGATCA CATTGGCCACTCCTGATTTGGAAGAGTACACTCCTGTCTTCTTTAGAGTCTTCAAAGACACTTCTACAGATAAGCCTAAG GTTCTCATGTGCTCAGATGCTAGACCTTCATCGTTGAAGCAAGACAGGGGTCCACTCAAACAAGATAGGATGTACAAACC ATCATTTGCTGGGTTTGTGGACGTTGATCTATCTGATGGAAGGATCTCTCTAAGGAGTTTGATAGATCACTCGGTAGTAG AGAGCTTCGGAGCTTTAGGGAAAACAGTAATAACGTCAAGAGTGTATCCATTGAAAGCAGTGAAAGGGAATGCACATTTG TATGTGTTTAACAATGGAACACAGACTGTAAACATAGAGAGTCTTGATGCATGGAGCATGGAGAAGCCTTTGCAGATGAT GAATAATGGAGCTCTCTAA |
Bn_scaffoldC04:66576183-66576191:- does not have available information here.