| Microexon ID | Bn_scaffoldC04:46147321-46147329:+ |
| Species | Brassica Napus | Coordinates | scaffoldC04:46147321..46147329 |
| Microexon Cluster ID | MEP22 |
| Size | 9 |
| Phase | 1 |
| Pfam Domain Motif | Glyco_hydro_32N |
| Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
| Microexon location in the Microexon-tag | 2 |
| Microexon-tag DNA Seq | YSKYAMMGRACYGSYTWYCAYTTYCARCCYSMCAARAAYTGGATGAAYGATCCYAAYGGTCCAATGTWYTACAAGGGATKGTACCAYYTSTTCTAYCARTACAAYCCV |
| Logo of Microexon-tag DNA Seq |  |
| Alignment of exons |  |
| Microexon DNA seq | ATCCAAATG |
| Microexon Amino Acid seq | DPNG |
| Microexon-tag DNA Seq | CTTCACAGAACCGGCTTTCACTTTCAACCTCCACGCCATTGGATTAACGATCCAAATGGTCCAATGGTGTACAAGGGAATCTACCATCTTTTCTACCAATACAATCCC |
| Microexon-tag Amino Acid Seq | LHRTGFHFQPPRHWINDPNGPMVYKGIYHLFYQYNP |
| Microexon-tag spanning region | 46147089-46147466 |
| Microexon-tag prediction score | 0.9441 |
| Overlapped with the annotated transcript (%) | 100 |
| New Transcript ID | BnaC04T0344200ZSx |
| Reference Transcript ID | BnaC04T0344200ZS |
| Gene ID | BnaC04G0344200ZS |
| Gene Name | NA |
| Transcript ID | BnaC04T0344200ZS |
| Protein ID | |
| Gene ID | BnaC04G0344200ZS |
| Gene Name | |
| Pfam domain motif | Glyco_hydro_32N |
| Motif E-value | 1.00E-103 |
| Motif start | 55 |
| Motif end | 373 |
| Protein seq | >BnaC04T0344200ZS MNASKIVSLLLLLVLINISSNDINGVNAFHKVIKKMQSKSTSLEVVSHLHRTGFHFQPPRHWINDPNGPMVYKGIYHLFY QYNPKGAVWGNIVWAHSVSKDLINWEALEPAIYPSKWFDINGTWSGSATNVPGKGPVILYTGITENHTQIQNYAIPQDLS DPYLKKWIKPDDNPIVRPDHGENGSAFRDPTTAWFNKKDGHWRMLVGSKNKRRGIAYMYKSRDFKKWVKTRRPVHTRKAT GMWECPDFFPVSIGKKTGLDTSYDGPNTKHVLKVSLDLTRYEYYTLGTYDTKKDRYKPDGTTPDGWDGLRLDYGNFYASK TFFDDTKNRRILWGWANESDSAVEDTLKGWAGVQLIPRTVLLDSSGKQLVFWPIEEIESLRGKNVQMNNQKIEMGQRFEV QGITPAQVDVDVTFNVGSLDKAETFDASFATKPLDLCNLKGSNVTGGVGPFGLITLATSDLQEYTPVFFRVFKDATTNKP KVLMCSDAKPSTLKGDTGTDSTEKMYKPSFAGFVDVDLADGKISLRSLIDHSVVESFGAKGKTVITSRVYPTKAVGDNAH LFVFNNGSQPVTVESLNAWNMQKPEKMNQGAK* |
| CDS seq | >BnaC04T0344200ZS ATGAATGCTTCAAAGATTGTTTCTTTGTTACTATTGCTTGTATTAATCAATATAAGCAGTAATGATATCAATGGCGTCAA TGCATTTCACAAAGTTATCAAGAAAATGCAATCTAAATCAACATCGTTAGAGGTAGTGAGCCATCTTCACAGAACCGGCT TTCACTTTCAACCTCCACGCCATTGGATTAACGATCCAAATGGTCCAATGGTGTACAAGGGAATCTACCATCTTTTCTAC CAATACAATCCCAAAGGTGCGGTTTGGGGTAACATTGTGTGGGCTCATTCAGTTTCTAAGGACTTGATCAATTGGGAAGC TCTTGAACCGGCTATTTACCCCTCCAAATGGTTTGATATCAATGGTACATGGTCCGGTTCAGCCACCAACGTACCGGGAA AAGGACCGGTTATCCTCTACACTGGTATCACCGAGAACCATACTCAGATCCAAAATTATGCCATTCCCCAAGACCTTTCC GACCCATACCTCAAGAAATGGATCAAGCCCGACGACAACCCTATCGTAAGACCCGACCATGGCGAGAATGGATCCGCTTT CCGTGACCCGACAACTGCTTGGTTCAACAAAAAAGATGGGCACTGGAGAATGCTTGTGGGCTCAAAGAACAAGCGTAGAG GAATTGCTTATATGTACAAAAGTCGTGACTTCAAGAAATGGGTCAAAACTAGACGTCCCGTACACACTAGAAAAGCAACC GGTATGTGGGAATGTCCCGACTTTTTCCCGGTTTCCATCGGCAAGAAAACCGGTTTAGACACCAGCTATGACGGTCCAAA CACCAAGCATGTGTTGAAGGTTAGCTTGGACCTGACCAGGTACGAGTACTACACTCTTGGAACGTATGATACTAAGAAGG ATCGTTACAAGCCTGATGGTACCACTCCTGATGGTTGGGATGGTTTGAGACTAGATTATGGTAACTTCTATGCGTCAAAG ACATTCTTTGATGACACGAAGAACAGAAGAATCCTCTGGGGTTGGGCTAATGAATCTGATAGTGCTGTGGAAGATACCTT GAAGGGTTGGGCCGGTGTTCAGCTTATCCCAAGAACGGTCTTGCTTGACTCTAGTGGTAAGCAACTCGTGTTTTGGCCTA TTGAAGAAATCGAGTCGTTGAGAGGAAAGAATGTTCAAATGAACAACCAGAAAATAGAAATGGGTCAACGCTTTGAGGTC CAAGGGATCACCCCGGCCCAGGTTGATGTGGATGTGACATTCAACGTAGGAAGTCTAGACAAGGCAGAAACATTTGACGC GAGTTTTGCAACAAAACCACTAGATTTATGTAATTTGAAGGGTTCAAATGTGACTGGTGGGGTTGGCCCTTTTGGTCTGA TCACCTTGGCTACATCTGACCTACAAGAATACACTCCCGTCTTCTTCAGAGTCTTCAAAGATGCCACAACCAACAAGCCT AAGGTCCTCATGTGCTCTGATGCCAAGCCTTCAACTCTCAAAGGAGACACGGGCACTGACTCCACGGAGAAGATGTACAA ACCCTCGTTTGCTGGTTTTGTCGATGTTGATCTCGCCGACGGAAAGATATCTTTAAGGAGTTTGATTGATCACTCGGTCG TGGAAAGCTTTGGAGCAAAAGGAAAGACAGTGATAACATCTCGAGTGTATCCTACCAAAGCTGTAGGTGACAACGCTCAT TTGTTTGTCTTCAACAATGGGTCACAGCCTGTGACTGTTGAGAGCCTCAACGCATGGAACATGCAGAAGCCCGAGAAAAT GAACCAAGGAGCTAAATGA |
Bn_scaffoldC04:46147321-46147329:+ does not have available information here.