| Microexon ID | Bn_scaffoldC03:11617994-11618002:- |
| Species | Brassica Napus | Coordinates | scaffoldC03:11617994..11618002 |
| Microexon Cluster ID | MEP22 |
| Size | 9 |
| Phase | 1 |
| Pfam Domain Motif | Glyco_hydro_32N |
| Structure of Microexon-tag (flanking exon, microexon, flanking exon sizes) | 49,9,50 |
| Microexon location in the Microexon-tag | 2 |
| Microexon-tag DNA Seq | YSKYAMMGRACYGSYTWYCAYTTYCARCCYSMCAARAAYTGGATGAAYGATCCYAAYGGTCCAATGTWYTACAAGGGATKGTACCAYYTSTTCTAYCARTACAAYCCV |
| Logo of Microexon-tag DNA Seq |  |
| Alignment of exons |  |
| Microexon DNA seq | ATCCAAATG |
| Microexon Amino Acid seq | DPNG |
| Microexon-tag DNA Seq | CTTCACAGATCCGCTTTTCACTTTCAACCTCCAAAGCATTGGATTAACGATCCAAATGGTCCATTGTACTACAAAGGTTTCTACCATCTCTTCTACCAATATAACACC |
| Microexon-tag Amino Acid Seq | LHRSAFHFQPPKHWINDPNGPLYYKGFYHLFYQYNT |
| Microexon-tag spanning region | 11617834-11618962 |
| Microexon-tag prediction score | 0.9505 |
| Overlapped with the annotated transcript (%) | 100 |
| New Transcript ID | BnaC03T0202100ZSx |
| Reference Transcript ID | BnaC03T0202100ZS |
| Gene ID | BnaC03G0202100ZS |
| Gene Name | NA |
| Transcript ID | BnaC03T0202100ZS |
| Protein ID | |
| Gene ID | BnaC03G0202100ZS |
| Gene Name | |
| Pfam domain motif | Glyco_hydro_32N |
| Motif E-value | 4.90E-100 |
| Motif start | 52 |
| Motif end | 371 |
| Protein seq | >BnaC03T0202100ZS MGVSSIISVMLLLVLINLCNNIKGIDAFHQVYEKLQSQSVESVNHLHRSAFHFQPPKHWINDPNGPLYYKGFYHLFYQYN TKGAVWGNIVWAHSVSKDLVNWEALEHAIYPSKWFDIKGTWSGSITLVPGKGPVILYTGINQNETQIQNYAIPEDPSDPY LRKWIKPDDNPVAVPDYTMNGSDFRDPTTAWFSKDGHWRTVVGSRRKHRGIGYIYRSKDFKHWVKAKHPIHSKESTGMWE CPDFFPVSTTDFENGLDLDYAGPSAKHVLKVSLDMTRYEYYTLGKYYPNKDRYVPNGESPDGWDGLRFDYGNFYASKTFF DYKKNRRILWGWANESDTVEDDISKGWAGLQVIPRTVLLDSTNKKQLEFWPIEEIKSLRSSYVRMNNKDIKMGQRLEVKG ITPAQADVEVTFNVGSLEKAEPFDPSYTYKPLDLCRVKGSNVTGGVGPFGLITLATPDLEEYTPVFFRVFKGTSINKPKV LMCSDARPSSLKQDRGPLKQDRMYKPPFAGFVDVDLTDGRISLRSLIDHSVVESFGALGKTVITSRVYPIKAVKENAHLY VFNNGTQTVNVESLDAWSMERPLQMNNGAT* |
| CDS seq | >BnaC03T0202100ZS ATGGGTGTCTCAAGTATTATTTCTGTGATGTTATTGCTTGTACTAATCAATTTATGCAATAATATCAAAGGAATTGACGC TTTTCATCAAGTTTATGAAAAATTGCAGTCTCAGTCAGTTGAGTCAGTGAATCATCTTCACAGATCCGCTTTTCACTTTC AACCTCCAAAGCATTGGATTAACGATCCAAATGGTCCATTGTACTACAAAGGTTTCTACCATCTCTTCTACCAATATAAC ACCAAAGGTGCAGTTTGGGGTAATATTGTGTGGGCGCATTCGGTTTCCAAAGACTTGGTGAATTGGGAGGCTCTTGAACA TGCCATCTATCCCTCCAAATGGTTCGACATCAAAGGTACATGGTCCGGTTCAATAACACTCGTACCGGGAAAAGGACCGG TTATCCTCTATACCGGCATTAACCAAAACGAAACTCAAATCCAAAACTACGCAATCCCGGAGGATCCCTCAGACCCATAC CTAAGAAAATGGATTAAACCAGATGATAATCCGGTTGCAGTGCCAGATTATACCATGAATGGTTCAGACTTTCGTGACCC AACCACGGCCTGGTTTTCCAAAGACGGACATTGGAGAACCGTCGTGGGGTCAAGAAGAAAGCATAGAGGAATCGGATATA TCTACAGAAGCAAAGATTTTAAGCATTGGGTCAAAGCTAAGCACCCTATCCACTCCAAAGAATCCACCGGTATGTGGGAA TGTCCTGACTTCTTCCCGGTTTCCACAACCGATTTTGAGAACGGTTTGGACTTAGATTACGCCGGTCCAAGCGCTAAGCA CGTGTTGAAAGTTAGCTTGGACATGACACGGTACGAGTATTACACGCTTGGCAAATACTATCCTAACAAGGACCGTTATG TACCAAACGGTGAATCGCCAGATGGCTGGGACGGTTTAAGATTTGATTACGGTAACTTCTATGCCTCCAAGACATTCTTT GACTACAAAAAGAACAGAAGAATCTTGTGGGGTTGGGCTAATGAATCTGACACCGTTGAAGATGATATATCCAAGGGCTG GGCTGGTCTTCAGGTAATTCCAAGAACGGTGCTTCTTGACTCAACAAACAAGAAACAACTAGAGTTTTGGCCTATTGAAG AAATAAAATCATTAAGAAGTAGTTATGTCCGAATGAACAACAAAGACATCAAGATGGGTCAACGCTTAGAAGTCAAAGGA ATCACTCCTGCCCAGGCCGATGTGGAAGTGACATTCAACGTTGGAAGTCTAGAGAAAGCTGAGCCATTCGACCCGAGCTA CACATACAAGCCGTTAGATTTGTGTAGAGTGAAAGGCTCGAACGTGACAGGTGGTGTTGGACCTTTTGGTCTGATCACAT TAGCCACCCCTGATCTGGAAGAGTACACTCCTGTCTTCTTTAGAGTCTTCAAAGGCACTTCCATAAATAAGCCTAAGGTC CTCATGTGCTCCGATGCTAGACCTTCGTCCTTAAAGCAAGACAGGGGTCCACTCAAACAAGATAGGATGTATAAGCCACC ATTTGCTGGTTTTGTGGATGTTGACCTAACTGATGGAAGGATCTCTCTAAGGAGTTTGATTGACCATTCGGTAGTAGAGA GCTTTGGAGCGTTAGGGAAGACAGTGATAACGTCAAGAGTGTATCCGATAAAAGCAGTGAAAGAGAATGCACATTTGTAT GTGTTTAATAATGGAACACAAACTGTGAACGTAGAGAGTCTTGATGCTTGGAGCATGGAGAGGCCTTTGCAGATGAATAA TGGAGCTACTTAA |
Bn_scaffoldC03:11617994-11618002:- does not have available information here.